UHGV-0091204 (vOTU-036147)

Viral Genome: UHGV-0091204

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0091204
vOTU ID	vOTU-036147
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_170572
Associated BioSample	SAMEA3136673
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	72.28 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.977
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.25
Jumbo phage	No

Genome content
Genome length (bp)	32,490
GC content	33.71%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	89%
Average CDS length (bps)	611.87
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 72.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0091204_1	UniRef90_A0A412I387	597.0	0	N/A	N/A
eggNOG-mapper	UHGV-0091204_1	518637.EUBIFOR_01009	501.0	0	N/A	N/A
PADLOC	UHGV-0091204_1	drt-cluster579	112.3	1e-32	DRT	DRT
Pfam	UHGV-0091204_1	PF08902	N/A	N/A	N/A	DUF1848
COG	UHGV-0091204_1	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0091204_1	PF08902,MF_01873,NF033719,COG0820	N/A	N/A	N/A	N/A
KOfam	UHGV-0091204_2	K01447	54.1	0.0000000000000034	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0091204_2	phrog_7698	154.7	1.4013e-45	endolysin	lysis
UniRef90	UHGV-0091204_2	UniRef90_UPI001D0AA402	394.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0091204_2	1125712.HMPREF1316_2631	143.0	8.60001e-40	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0091204_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0091204_2	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0091204_2	COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_4	phrog_443	54.5	0.0000000000000034	holin	lysis
UniRef90	UHGV-0091204_4	UniRef90_A0A2U2ELA1	78.2	1.35e-17	Membrane protein	N/A
eggNOG-mapper	UHGV-0091204_4	476272.RUMHYD_01759	85.1	5.63e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0091204_4	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0091204_4	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_6	phrog_20016	68.0	1.2e-19	N/A	unknown function
UniRef90	UHGV-0091204_6	UniRef90_A0A395WF88	266.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0091204_6	1226322.HMPREF1545_00077	60.8	0.000000000822	N/A	N/A
Pfam	UHGV-0091204_6	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-0091204_6	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091204_7	UniRef90_A0A8F0WFQ8	69.7	0.000000000103	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0091204_7	476272.RUMHYD_01770	114.0	1.27e-28	N/A	N/A
PHROG	UHGV-0091204_12	phrog_24451	92.6	3.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0091204_12	908340.HMPREF9406_2565	86.3	2.27e-20	N/A	N/A
PHROG	UHGV-0091204_13	phrog_4492	60.9	6.1e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-0091204_13	756499.Desde_1105	57.4	0.00000261	N/A	N/A
structural_annotation	UHGV-0091204_13	PF03425,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_14	phrog_24103	82.5	2.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0091204_14	1118055.CAGU01000013_gene761	78.6	0.00000000000000231	N/A	N/A
PHROG	UHGV-0091204_16	phrog_15594	90.3	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0091204_16	1118055.CAGU01000013_gene763	65.5	0.00000000000138	N/A	N/A
structural_annotation	UHGV-0091204_16	PF16640,TIGR04488	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0091204_17	1232452.BAIB02000007_gene1610	64.7	0.00000000372	N/A	N/A
structural_annotation	UHGV-0091204_18	PF16407,TIGR02657,COG3794	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091204_19	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0091204_20	537007.BLAHAN_05252	56.2	0.000000854	N/A	N/A
structural_annotation	UHGV-0091204_20	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_21	phrog_1067	47.6	1.6e-22	minor head protein	head and packaging
eggNOG-mapper	UHGV-0091204_21	1232446.BAIE02000002_gene836	59.3	0.00000223	Phage minor structural protein	N/A
Pfam	UHGV-0091204_21	PF14200	N/A	N/A	Ricin-type beta-trefoil lectin domain-like	RicinB_lectin_2
NCBIFam	UHGV-0091204_21	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0091204_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0091204_21	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_22	phrog_33	53.7	0.0000000000000057	distal tail protein Dit	tail
UniRef90	UHGV-0091204_22	UniRef90_A0A1C6JHE5	65.1	0.00000000624	Phage-related protein	N/A
eggNOG-mapper	UHGV-0091204_22	573061.Clocel_0222	55.8	0.0000019	tail component	N/A
Pfam	UHGV-0091204_22	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0091204_22	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0091204_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0091204_22	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0091204_23	K10402	44.2	0.00000000000039	KIF20; kinesin family member 20	N/A
PHROG	UHGV-0091204_23	phrog_13339	331.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0091204_23	UniRef90_A0A395WD11	1873.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0091204_23	999425.HMPREF9186_02045	248.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0091204_23	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0091204_23	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0091204_23	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0091204_23	PF10145,TIGR01760,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_24	phrog_709	45.7	0.0000000000011	N/A	unknown function
structural_annotation	UHGV-0091204_24	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_25	phrog_88	143.5	1.19951e-42	major tail protein	tail
UniRef90	UHGV-0091204_25	UniRef90_A0A395WA58	397.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0091204_25	1033744.CAEL01000029_gene1276	155.0	2.8026e-45	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0091204_25	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0091204_25	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091204_26	UniRef90_A0A374RUJ8	143.0	2.50006e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0091204_26	86416.Clopa_0344	58.2	0.00000000637	N/A	N/A
Pfam	UHGV-0091204_26	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0091204_26	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091204_27	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_28	phrog_1951	72.6	4e-21	head-tail adaptor	connector
UniRef90	UHGV-0091204_28	UniRef90_A0A395WC07	224.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0091204_28	1243664.CAVL020000054_gene3020	60.5	0.000000000195	head-tail adaptor	N/A
NCBIFam	UHGV-0091204_28	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0091204_28	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0091204_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_29	phrog_5223	54.5	0.0000000000000018	neck protein	connector
UniRef90	UHGV-0091204_29	UniRef90_A0A374RXD1	78.2	7.19e-17	DNA-packaging protein	N/A
structural_annotation	UHGV-0091204_29	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_30	phrog_10	80.8	2.1e-23	major head protein	head and packaging
UniRef90	UHGV-0091204_30	UniRef90_A0A395WF70	795.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0091204_30	1536774.H70357_10630	167.0	2.52234e-44	Phage capsid family	N/A
Pfam	UHGV-0091204_30	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0091204_30	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0091204_30	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0091204_30	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0091204_31	K06904	87.7	1.8e-25	N/A	N/A
PHROG	UHGV-0091204_31	phrog_80	118.5	9.6e-35	head maturation protease	head and packaging
UniRef90	UHGV-0091204_31	UniRef90_A0A413UET6	348.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0091204_31	411470.RUMGNA_02064	171.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0091204_31	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0091204_31	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0091204_31	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0091204_31	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_32	phrog_12	99.9	2e-29	portal protein	head and packaging
UniRef90	UHGV-0091204_32	UniRef90_A0A395W9X2	810.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0091204_32	1203606.HMPREF1526_01337	286.0	0	Portal protein	N/A
Pfam	UHGV-0091204_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0091204_32	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0091204_32	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_33	phrog_9	308.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0091204_33	UniRef90_A0A395WD03	1124.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0091204_33	742740.HMPREF9474_04307	549.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-0091204_33	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0091204_33	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0091204_33	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0091204_33	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_34	phrog_361	74.5	1.3e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0091204_34	UniRef90_A0A1C6H6I9	80.1	6.43e-17	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0091204_34	1329516.JPST01000017_gene431	50.1	0.00000474	Phage terminase, small subunit	N/A
Pfam	UHGV-0091204_34	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0091204_34	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0091204_34	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_35	phrog_119	59.1	8e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091204_35	UniRef90_A0A395WA48	262.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0091204_35	1211814.CAPG01000074_gene3460	65.1	0.00000000000537	HNH endonuclease	N/A
Pfam	UHGV-0091204_35	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0091204_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
COG	UHGV-0091204_38	COG4842	N/A	N/A	Secreted virulence factor YukE/EsxA, WXG100 family	N/A
UniRef90	UHGV-0091204_41	UniRef90_A0A3E4YBW5	121.0	3.49e-34	N/A	N/A
eggNOG-mapper	UHGV-0091204_41	1280676.AUJO01000024_gene3262	63.2	0.00000000000857	N/A	N/A
structural_annotation	UHGV-0091204_41	PF16475,MF_00436,NF033216	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091204_42	PF10879	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091204_43	UniRef90_A0A413UEX6	286.0	0	N/A	N/A
Pfam	UHGV-0091204_43	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0091204_43	PF07374,NF008895	N/A	N/A	N/A	N/A
PHROG	UHGV-0091204_46	phrog_30559	43.0	0.0000000000081	N/A	unknown function