UHGV-0091758 (vOTU-025027)

Viral Genome: UHGV-0091758

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0091758
vOTU ID	vOTU-025027
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_168938
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.84 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.16
Jumbo phage	No

Genome content
Genome length (bp)	28,376
GC content	38.03%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	40
CDS density	93%
Average CDS length (bps)	662.78
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0091758_1	phrog_17690	121.6	3.3e-36	N/A	unknown function
UniRef90	UHGV-0091758_1	UniRef90_A0A6L5XWF4	110.0	8.57e-29	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0091758_1	665950.HMPREF1025_02546	97.8	2.12e-24	N/A	N/A
PHROG	UHGV-0091758_5	phrog_31515	135.8	7.50003e-41	N/A	unknown function
structural_annotation	UHGV-0091758_5	PF07338,NF033776	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_7	phrog_21101	46.8	4.8e-17	N/A	unknown function
UniRef90	UHGV-0091758_7	UniRef90_D4MWL6	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-0091758_7	592028.GCWU000321_00789	94.4	4.02e-24	N/A	N/A
Pfam	UHGV-0091758_7	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-0091758_7	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091758_7	PF07866,COG4728	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091758_8	UniRef90_A0A374AM63	47.4	0.00000175	N/A	N/A
Pfam	UHGV-0091758_8	PF12664	N/A	N/A	N/A	DUF3789
PHROG	UHGV-0091758_10	phrog_30258	125.3	2.1e-37	N/A	unknown function
PHROG	UHGV-0091758_11	phrog_36	71.2	1.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0091758_11	UniRef90_R6ZAS5	145.0	9.04959e-42	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0091758_11	411490.ANACAC_00789	169.0	0	N/A	N/A
structural_annotation	UHGV-0091758_11	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_12	phrog_1048	161.6	0	N/A	unknown function
UniRef90	UHGV-0091758_12	UniRef90_A0A417V882	347.0	0	N/A	N/A
eggNOG-mapper	UHGV-0091758_12	457412.RSAG_01107	182.0	0	N/A	N/A
Pfam	UHGV-0091758_12	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0091758_12	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0091758_12	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_13	phrog_478	127.8	4.3e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0091758_13	UniRef90_A0A285PT53	198.0	0	Prokaryotic membrane lipoprotein lipid attachment site profile	N/A
eggNOG-mapper	UHGV-0091758_13	1235792.C808_00058	185.0	0	N/A	N/A
KOfam	UHGV-0091758_14	K07474	131.4	1.3e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0091758_14	phrog_51	146.6	1.30321e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0091758_14	UniRef90_A0A417V811	315.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0091758_14	1298920.KI911353_gene4857	213.0	0	Terminase small subunit	N/A
Pfam	UHGV-0091758_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0091758_14	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0091758_14	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0091758_15	K06909	105.2	8e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0091758_15	phrog_2	72.9	6.7e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0091758_15	UniRef90_A0A417V8L6	922.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0091758_15	1304866.K413DRAFT_0811	743.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0091758_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0091758_15	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_16	phrog_533	279.2	0	portal protein	head and packaging
UniRef90	UHGV-0091758_16	UniRef90_A0A417V837	1047.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0091758_16	33035.JPJF01000093_gene2257	591.0	0	N/A	N/A
structural_annotation	UHGV-0091758_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_17	phrog_25639	72.0	5.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0091758_17	742740.HMPREF9474_03502	64.3	0.000000000000914	N/A	N/A
PHROG	UHGV-0091758_18	phrog_581	253.4	0	minor head protein	head and packaging
UniRef90	UHGV-0091758_18	UniRef90_UPI0015715021	1017.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0091758_18	33035.JPJF01000093_gene2255	424.0	0	N/A	N/A
Pfam	UHGV-0091758_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0091758_18	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0091758_18	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091758_20	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_21	phrog_2303	142.5	3.20057e-42	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0091758_21	742740.HMPREF9474_03504	178.0	0	N/A	N/A
PHROG	UHGV-0091758_22	phrog_422	279.6	0	major head protein	head and packaging
UniRef90	UHGV-0091758_22	UniRef90_A0A417V845	582.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0091758_22	663278.Ethha_1589	392.0	0	N/A	N/A
structural_annotation	UHGV-0091758_22	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_23	phrog_541	70.4	2.3e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0091758_23	1298920.KI911353_gene4848	136.0	1.21e-39	N/A	N/A
PHROG	UHGV-0091758_24	phrog_8710	145.7	1.09301e-43	N/A	unknown function
eggNOG-mapper	UHGV-0091758_24	742740.HMPREF9474_03508	143.0	4.9606e-43	N/A	N/A
structural_annotation	UHGV-0091758_24	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_25	phrog_556	56.3	5.4e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0091758_25	742740.HMPREF9474_03509	162.0	0	N/A	N/A
PHROG	UHGV-0091758_26	phrog_2595	105.0	5.4e-31	head-tail connector protein	connector
UniRef90	UHGV-0091758_26	UniRef90_UPI001D0627B3	203.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0091758_26	679192.HMPREF9013_1297	140.0	2.84996e-41	N/A	N/A
Pfam	UHGV-0091758_26	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0091758_26	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_27	phrog_820	124.9	4.3e-37	major tail protein	tail
eggNOG-mapper	UHGV-0091758_27	1282664.H354_06691	200.0	0	N/A	N/A
structural_annotation	UHGV-0091758_27	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_28	phrog_8300	92.0	5.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0091758_28	33035.JPJF01000093_gene2245	102.0	6.05e-27	N/A	N/A
structural_annotation	UHGV-0091758_28	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_29	phrog_8355	99.2	1.7e-29	N/A	unknown function
UniRef90	UHGV-0091758_29	UniRef90_UPI001D0684E3	124.0	2.19e-35	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0091758_29	33035.JPJF01000093_gene2244	96.7	2.23e-25	N/A	N/A
PHROG	UHGV-0091758_30	phrog_1535	257.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0091758_30	UniRef90_A0A1C5RRP4	464.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0091758_30	742740.HMPREF9474_03514	402.0	0	tape measure	N/A
COG	UHGV-0091758_30	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0091758_30	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_31	phrog_1194	81.4	1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0091758_31	33035.JPJF01000093_gene2242	129.0	2.18e-37	N/A	N/A
structural_annotation	UHGV-0091758_31	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_32	phrog_1401	54.7	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0091758_32	UniRef90_UPI001A9A8A65	56.6	0.000000113	N/A	N/A
structural_annotation	UHGV-0091758_32	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0091758_33	phrog_16267	188.2	0	N/A	unknown function
UniRef90	UHGV-0091758_33	UniRef90_UPI00156FBBAC	1957.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0091758_33	1294142.CINTURNW_1706	201.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0091758_33	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0091758_33	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0091758_34	phrog_2566	75.9	3.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0091758_34	1232453.BAIF02000058_gene1639	61.6	0.0000000000138	N/A	N/A
PHROG	UHGV-0091758_35	phrog_937	62.3	8.7e-18	hemolysin	other
eggNOG-mapper	UHGV-0091758_35	411459.RUMOBE_01081	108.0	2.28e-29	N/A	N/A
PHROG	UHGV-0091758_36	phrog_443	65.9	1.1e-18	holin	lysis
UniRef90	UHGV-0091758_36	UniRef90_UPI001BA9F6DF	108.0	1.24e-29	holin	N/A
eggNOG-mapper	UHGV-0091758_36	1235802.C823_05612	90.9	3.12e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0091758_36	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0091758_36	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0091758_37	K01448	98.7	7e-29	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0091758_37	phrog_435	153.3	1.4013e-45	endolysin	lysis
UniRef90	UHGV-0091758_37	UniRef90_UPI000985947E	369.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0091758_37	411490.ANACAC_00597	286.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0091758_37	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0091758_37	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0091758_37	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
KOfam	UHGV-0091758_38	K14059	100.0	3.8e-29	int; integrase	N/A
PHROG	UHGV-0091758_38	phrog_1	140.6	1.49995e-41	integrase	integration and excision
UniRef90	UHGV-0091758_38	UniRef90_A0A173RTF4	842.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0091758_38	428125.CLOLEP_01345	515.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0091758_38	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0091758_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0091758_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0091758_38	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091758_39	UniRef90_A0A173RTG3	436.0	0	Bacterial Ig-like domain (Group 2)	N/A
eggNOG-mapper	UHGV-0091758_39	1449050.JNLE01000003_gene3872	125.0	5.8e-33	Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0091758_39	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-0091758_39	PF02368,NF005261,COG3121	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091758_40	UniRef90_A0A417V8U5	384.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0091758_40	397290.C810_01424	83.2	2.39e-16	N/A	N/A