UHGV-0091864 (vOTU-075925)

Viral Genome: UHGV-0091864

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0091864
vOTU ID	vOTU-075925
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_199872
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.38 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.96
Jumbo phage	No

Genome content
Genome length (bp)	42,121
GC content	41.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	69
CDS density	91%
Average CDS length (bps)	553.87
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0091864_1	K06909	58.1	1.7e-16	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0091864_1	phrog_18557	85.7	2.9e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0091864_1	UniRef90_D3ANA1	94.0	4.52e-23	Terminase_3C domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0091864_1	397291.C804_01612	88.2	3.88e-19	Phage terminase large subunit	N/A
COG	UHGV-0091864_1	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0091864_1	PF17288	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_2	phrog_533	271.2	0	portal protein	head and packaging
UniRef90	UHGV-0091864_2	UniRef90_A0A1C6CDM8	657.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0091864_2	33035.JPJF01000106_gene3135	494.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0091864_2	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_3	phrog_581	272.5	0	minor head protein	head and packaging
UniRef90	UHGV-0091864_3	UniRef90_A0A395X791	759.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0091864_3	33035.JPJF01000106_gene3134	424.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0091864_3	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0091864_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091864_3	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_4	phrog_3754	113.4	1.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-0091864_4	476272.RUMHYD_01764	173.0	0	N/A	N/A
UniRef90	UHGV-0091864_5	UniRef90_A0A395X7A4	177.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0091864_5	476272.RUMHYD_01766	120.0	2.16e-34	N/A	N/A
KOfam	UHGV-0091864_6	K07726	43.5	0.0000000000054	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0091864_6	phrog_2104	40.9	0.000000000034	N/A	unknown function
UniRef90	UHGV-0091864_6	UniRef90_A0A412ELA1	101.0	3.37e-27	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_6	1410625.JHWK01000002_gene45	73.2	1.08e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0091864_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0091864_6	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0091864_6	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_8	phrog_21718	134.2	5.6e-40	N/A	unknown function
eggNOG-mapper	UHGV-0091864_8	476272.RUMHYD_01768	129.0	3.21e-36	N/A	N/A
PHROG	UHGV-0091864_9	phrog_22984	96.2	2e-28	N/A	unknown function
PHROG	UHGV-0091864_10	phrog_16490	192.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0091864_10	397290.C810_01328	182.0	0	N/A	N/A
PHROG	UHGV-0091864_11	phrog_20016	206.4	0	N/A	unknown function
UniRef90	UHGV-0091864_11	UniRef90_A0A285PT46	167.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0091864_11	397290.C810_05214	185.0	0	N/A	N/A
structural_annotation	UHGV-0091864_11	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_12	phrog_28802	222.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0091864_12	476272.RUMHYD_01772	196.0	0	N/A	N/A
PHROG	UHGV-0091864_13	phrog_194	65.5	1.1e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0091864_13	UniRef90_UPI001D14C9C8	181.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0091864_13	476272.RUMHYD_01775	198.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0091864_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0091864_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_14	phrog_544	164.5	0	major head protein	head and packaging
UniRef90	UHGV-0091864_14	UniRef90_A0A395X7A1	666.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_14	1232453.BAIF02000011_gene3359	387.0	0	N/A	N/A
Pfam	UHGV-0091864_14	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0091864_14	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_15	phrog_541	97.7	7.9e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0091864_15	476272.RUMHYD_01778	95.5	9.84e-23	N/A	N/A
PHROG	UHGV-0091864_17	phrog_1129	75.4	5.2e-22	holin	lysis
UniRef90	UHGV-0091864_17	UniRef90_A0A395X7B2	172.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0091864_17	411461.DORFOR_00721	113.0	7.19e-32	N/A	N/A
Pfam	UHGV-0091864_17	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0091864_17	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_18	phrog_3366	87.7	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0091864_18	476272.RUMHYD_01779	156.0	0	N/A	N/A
structural_annotation	UHGV-0091864_18	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_19	phrog_556	50.9	0.0000000000000025	minor head protein	head and packaging
UniRef90	UHGV-0091864_19	UniRef90_UPI000E4989EB	275.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0091864_19	476272.RUMHYD_01780	149.0	8.26766e-44	N/A	N/A
structural_annotation	UHGV-0091864_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_20	phrog_3266	94.8	7.1e-28	tail completion	connector
eggNOG-mapper	UHGV-0091864_20	476272.RUMHYD_01781	151.0	1.54143e-44	N/A	N/A
structural_annotation	UHGV-0091864_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_21	phrog_3099	133.2	1.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0091864_21	411902.CLOBOL_00129	169.0	0	N/A	N/A
structural_annotation	UHGV-0091864_21	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_22	phrog_11299	67.8	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0091864_22	411459.RUMOBE_01382	59.3	0.00000000298	N/A	N/A
structural_annotation	UHGV-0091864_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_23	phrog_706	135.8	2.9e-40	N/A	unknown function
UniRef90	UHGV-0091864_23	UniRef90_UPI001BAD00AD	213.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0091864_23	411459.RUMOBE_01383	352.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0091864_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0091864_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_24	phrog_1535	490.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0091864_24	UniRef90_A0A173R880	841.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0091864_24	476272.RUMHYD_01785	830.0	0	phage tail tape measure protein	N/A
COG	UHGV-0091864_24	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091864_24	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_25	phrog_1194	85.1	6.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0091864_25	394503.Ccel_3034	55.8	0.0000000282	N/A	N/A
structural_annotation	UHGV-0091864_25	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_26	phrog_6616	669.1	0	tail protein	tail
UniRef90	UHGV-0091864_26	UniRef90_UPI0015714EA8	625.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_26	33035.JPJF01000043_gene1002	252.0	0	N/A	N/A
structural_annotation	UHGV-0091864_26	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_27	phrog_18444	77.9	8.1e-23	N/A	unknown function
UniRef90	UHGV-0091864_27	UniRef90_UPI00156E9A45	72.8	0.00000000000000137	peptide chain release factor 2	N/A
KOfam	UHGV-0091864_29	K07273	184.0	0	acm; lysozyme	N/A
PHROG	UHGV-0091864_29	phrog_6745	191.8	0	endolysin	lysis
UniRef90	UHGV-0091864_29	UniRef90_A0A412SB50	917.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_29	476272.RUMHYD_02876	345.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0091864_29	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0091864_29	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0091864_29	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0091864_29	PF01183,PF18342,PF14603,NF040678,TIGR04303,COG3757,COG3807	N/A	N/A	N/A	N/A
KOfam	UHGV-0091864_30	K14059	86.7	3.9e-25	int; integrase	N/A
PHROG	UHGV-0091864_30	phrog_1	120.8	1.5e-35	integrase	integration and excision
UniRef90	UHGV-0091864_30	UniRef90_A0A6L8SXX0	615.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0091864_30	1235792.C808_05256	357.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0091864_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0091864_30	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_31	phrog_8545	63.3	3.7e-18	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0091864_31	UniRef90_UPI001C0EAFDF	214.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0091864_31	742740.HMPREF9474_03479	151.0	5.60519e-45	tRNA_anti-like	N/A
Pfam	UHGV-0091864_31	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0091864_31	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-0091864_34	K18830	65.0	7.3e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0091864_34	phrog_8	53.6	0.0000000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-0091864_34	UniRef90_A0A6L8T004	238.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_34	748224.HMPREF9436_01444	118.0	2.06e-32	N/A	N/A
PADLOC	UHGV-0091864_34	retron_type_VI_hth_cluster2_1	40.1	0.0000000001	N/A	Retron
Pfam	UHGV-0091864_34	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0091864_34	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0091864_34	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091864_36	PF13601,MF_01819,NF038251,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_39	phrog_6058	52.4	0.0000000000000055	N/A	unknown function
UniRef90	UHGV-0091864_39	UniRef90_A0A2V1JQ38	62.4	0.000000000127	Glycogen synthase	N/A
eggNOG-mapper	UHGV-0091864_39	742733.HMPREF9469_05094	60.5	0.000000000121	N/A	N/A
AcrCatalog	UHGV-0091864_40	cluster_17974	59.3	0.0000000000000019	NA	N/A
structural_annotation	UHGV-0091864_44	NF011879	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091864_45	UniRef90_R6RDX0	77.0	3.04e-17	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-0091864_46	phrog_2872	150.0	1.26117e-44	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091864_46	UniRef90_UPI0015715A02	214.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0091864_46	1256908.HMPREF0373_00658	192.0	0	AAA domain	N/A
PHROG	UHGV-0091864_47	phrog_18107	243.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0091864_47	397290.C810_05167	223.0	0	N/A	N/A
structural_annotation	UHGV-0091864_47	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_48	phrog_3490	154.5	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091864_48	UniRef90_R9KEE1	265.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_48	397290.C810_05169	265.0	0	ERCC4 domain	N/A
Pfam	UHGV-0091864_48	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0091864_48	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0091864_49	K02316	73.1	4.3e-21	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0091864_49	phrog_11992	130.8	1.1e-38	N/A	unknown function
UniRef90	UHGV-0091864_49	UniRef90_A0A3A6GSV7	313.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0091864_49	411460.RUMTOR_02069	127.0	5.22e-35	CHC2 zinc finger	N/A
PADLOC	UHGV-0091864_49	drt-UG29	46.4	0.00000000000028	DRT	DRT
Pfam	UHGV-0091864_49	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0091864_49	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0091864_49	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_50	phrog_8841	493.6	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091864_50	UniRef90_A0A3A6GQS5	1253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0091864_50	411460.RUMTOR_02070	528.0	0	N/A	N/A
Pfam	UHGV-0091864_50	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0091864_50	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0091864_50	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091864_50	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0091864_51	K15255	248.7	0	PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]	N/A
PHROG	UHGV-0091864_51	phrog_325	269.1	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091864_51	UniRef90_A0A2V2D011	877.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_51	1121333.JMLH01000003_gene334	270.0	0	PIF1-like helicase	N/A
PADLOC	UHGV-0091864_51	cluster10	56.7	5.9e-19	RecD_0_IVD	CRISPR-CAS
Pfam	UHGV-0091864_51	PF05970	N/A	N/A	PIF1-like helicase	PIF1
COG	UHGV-0091864_51	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0091864_51	PF05970,PF18350,MF_03176,TIGR02768,COG0507	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091864_53	UniRef90_A0A6L8SWV5	173.0	0	Winged helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0091864_53	PF01726,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_55	phrog_17690	129.1	1.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0091864_55	476272.RUMHYD_03925	169.0	0	N/A	N/A
PHROG	UHGV-0091864_56	phrog_424	62.9	6.2e-18	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0091864_56	UniRef90_A0A373DE70	277.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0091864_56	1304866.K413DRAFT_1205	268.0	0	sulfate reduction	N/A
COG	UHGV-0091864_56	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0091864_58	PF17888	N/A	N/A	N/A	N/A
PHROG	UHGV-0091864_59	phrog_15198	51.8	0.000000000000015	N/A	unknown function
UniRef90	UHGV-0091864_59	UniRef90_UPI001D099705	150.0	8.40779e-45	N/A	N/A
Pfam	UHGV-0091864_59	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0091864_63	phrog_20593	50.2	0.000000000000012	N/A	unknown function
PHROG	UHGV-0091864_64	phrog_874	181.9	0	N/A	unknown function
UniRef90	UHGV-0091864_64	UniRef90_A0A6N7W7Q7	223.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0091864_64	411468.CLOSCI_00298	193.0	0	N/A	N/A
structural_annotation	UHGV-0091864_64	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091864_65	PF06107,COG4481	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0091864_68	1235793.C809_02210	57.0	0.0000000403	N/A	N/A