UHGV-0091937 (vOTU-099187)

Viral Genome: UHGV-0091937

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0091937
vOTU ID	vOTU-099187
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_180454
Associated BioSample	SAMEA3449351
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.73 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9765
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	66.75
Jumbo phage	No

Genome content
Genome length (bp)	34,535
GC content	49.51%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	91%
Average CDS length (bps)	734.23
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0091937_1	K14059	157.7	0	int; integrase	N/A
PHROG	UHGV-0091937_1	phrog_1	164.4	0	integrase	integration and excision
UniRef90	UHGV-0091937_1	UniRef90_UPI0005AA7FA8	212.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0091937_1	1378168.N510_03298	182.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0091937_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0091937_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0091937_1	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_2	K01356	164.7	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0091937_2	phrog_4	126.4	2.5e-37	transcriptional repressor	transcription regulation
UniRef90	UHGV-0091937_2	UniRef90_R6IAR6	333.0	0	SOS-response transcriptional repressors (RecA-mediated autopeptidases)	N/A
eggNOG-mapper	UHGV-0091937_2	561177.ANHYDRO_01377	168.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0091937_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0091937_2	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0091937_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0091937_2	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091937_3	UniRef90_A0A1Y4HWW0	55.1	0.0000000155	N/A	N/A
eggNOG-mapper	UHGV-0091937_3	910314.HMPREF9220_1114	51.2	0.000000092	N/A	N/A
Pfam	UHGV-0091937_3	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0091937_3	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0091937_3	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_8	K07741	168.1	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0091937_8	phrog_63	130.6	1.5e-38	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0091937_8	UniRef90_A0A1C5P786	307.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0091937_8	1414720.CBYM010000005_gene1349	259.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0091937_8	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0091937_8	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0091937_8	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0091937_8	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_10	K01449	60.1	3.3e-17	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0091937_10	phrog_18750	135.8	2.69999e-40	N/A	unknown function
UniRef90	UHGV-0091937_10	UniRef90_A0A3D5TM41	165.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0091937_10	445972.ANACOL_03333	139.0	8.67e-39	Cell wall hydrolase	N/A
Pfam	UHGV-0091937_10	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0091937_10	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0091937_10	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_11	phrog_424	96.7	2.1e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0091937_11	UniRef90_C0CTA2	464.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0091937_11	693746.OBV_43240	483.0	0	N/A	N/A
Pfam	UHGV-0091937_11	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0091937_11	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0091937_11	PF01507,MF_00064,TIGR02057,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_13	K07729	43.9	0.0000000000051	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0091937_13	phrog_8	47.4	0.00000000000045	transcriptional regulator	transcription regulation
UniRef90	UHGV-0091937_13	UniRef90_R6HY73	264.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0091937_13	226185.EF_2142	56.6	0.0000000318	sequence-specific DNA binding	N/A
Pfam	UHGV-0091937_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0091937_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0091937_13	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_14	K03546	65.0	8.8e-19	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0091937_14	phrog_1499	486.6	0	N/A	unknown function
UniRef90	UHGV-0091937_14	UniRef90_R6IXY5	806.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-0091937_14	411462.DORLON_00812	531.0	0	AAA ATPase domain	N/A
PADLOC	UHGV-0091937_14	AAA_15	47.9	0.00000000000038	N/A	N/A
Pfam	UHGV-0091937_14	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0091937_14	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0091937_14	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_15	phrog_124	239.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091937_15	UniRef90_UPI001411FE86	410.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0091937_15	394503.Ccel_3309	397.0	0	AAA domain	N/A
Pfam	UHGV-0091937_15	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0091937_15	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_16	phrog_2698	198.6	0	N/A	unknown function
UniRef90	UHGV-0091937_16	UniRef90_A0A417IL23	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-0091937_16	1123511.KB905868_gene200	174.0	0	N/A	N/A
structural_annotation	UHGV-0091937_16	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_17	K17677	352.4	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0091937_17	phrog_16	295.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091937_17	UniRef90_R6I0L6	1045.0	0	Type III restriction protein res subunit	N/A
eggNOG-mapper	UHGV-0091937_17	610130.Closa_1369	805.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0091937_17	mREase_IV_00005	144.6	8.29569e-43	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0091937_17	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0091937_17	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0091937_17	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0091937_17	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_18	K07505	439.6	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0091937_18	phrog_2597	1204.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091937_18	UniRef90_A0A1C6CSE0	1075.0	0	Regulatory protein repA	N/A
eggNOG-mapper	UHGV-0091937_18	394503.Ccel_3304	1046.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0091937_18	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0091937_18	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0091937_18	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0091937_18	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_19	K01160	57.1	5.5e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0091937_19	phrog_140	107.4	1.3e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0091937_19	UniRef90_R6HY68	275.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0091937_19	394503.Ccel_3302	186.0	0	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0091937_19	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0091937_19	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0091937_19	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091937_20	NF001606	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_21	phrog_36	77.2	2.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0091937_21	UniRef90_UPI001D05F87A	109.0	2.68e-28	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0091937_21	1235835.C814_01174	127.0	4.49e-36	N/A	N/A
structural_annotation	UHGV-0091937_21	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_23	K07474	110.7	2.7e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0091937_23	phrog_51	127.1	1.3e-37	terminase small subunit	head and packaging
UniRef90	UHGV-0091937_23	UniRef90_A0A374UNI2	182.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0091937_23	608534.GCWU000341_02298	176.0	0	Terminase small subunit	N/A
Pfam	UHGV-0091937_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0091937_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0091937_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0091937_24	K06909	392.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0091937_24	phrog_3717	173.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0091937_24	UniRef90_R6I0M1	842.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0091937_24	203119.Cthe_2474	528.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0091937_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0091937_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0091937_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0091937_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0091937_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_25	phrog_64	307.2	0	portal protein	head and packaging
UniRef90	UHGV-0091937_25	UniRef90_R6IBR5	1005.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0091937_25	97138.C820_00238	384.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0091937_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0091937_25	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_26	phrog_115	343.8	0	minor head protein	head and packaging
UniRef90	UHGV-0091937_26	UniRef90_A0A3D2QEP6	647.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0091937_26	1209989.TepiRe1_1146	271.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0091937_26	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0091937_26	PF14424	N/A	N/A	The BURPS668_1122 family of deaminases	Toxin-deaminase
NCBIFam	UHGV-0091937_26	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0091937_26	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_28	phrog_194	151.6	4.2039e-45	head scaffolding protein	head and packaging
UniRef90	UHGV-0091937_28	UniRef90_UPI001651708C	124.0	6.11e-32	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0091937_28	1196028.ALEF01000043_gene465	106.0	8.95e-26	Phage minor structural protein GP20	N/A
Pfam	UHGV-0091937_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0091937_29	phrog_283	288.9	0	major head protein	head and packaging
UniRef90	UHGV-0091937_29	UniRef90_UPI001896DBE2	407.0	0	P22 coat protein	N/A
eggNOG-mapper	UHGV-0091937_29	1297617.JPJD01000059_gene2633	391.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0091937_29	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0091937_29	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_30	phrog_132	50.9	0.000000000000024	head-tail adaptor	connector
UniRef90	UHGV-0091937_30	UniRef90_R6I6I7	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0091937_30	268407.PWYN_03015	49.7	0.00000463	N/A	N/A
structural_annotation	UHGV-0091937_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_32	phrog_5	102.0	6.4e-30	tail completion or Neck1 protein	connector
UniRef90	UHGV-0091937_32	UniRef90_R6IVT6	329.0	0	Bacteriophage protein PF04883 family	N/A
eggNOG-mapper	UHGV-0091937_32	1280692.AUJL01000025_gene2076	139.0	5.43999e-40	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0091937_32	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0091937_32	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0091937_32	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091937_33	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_34	phrog_158	61.0	2.7e-17	major tail protein	tail
UniRef90	UHGV-0091937_34	UniRef90_R6HYI8	280.0	0	Major tail protein putative	N/A
eggNOG-mapper	UHGV-0091937_34	1209989.TepiRe1_1157	85.5	2.33e-19	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0091937_34	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0091937_35	UniRef90_UPI0012BCDD8A	62.8	0.000000000308	N/A	N/A
eggNOG-mapper	UHGV-0091937_35	1211844.CBLM010000016_gene1484	56.6	0.0000000212	N/A	N/A
structural_annotation	UHGV-0091937_35	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_36	phrog_1535	125.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0091937_36	645991.Sgly_0352	196.0	0	SLT domain	N/A
COG	UHGV-0091937_36	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0091937_37	phrog_26910	57.1	3.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0091937_37	1117958.PE143B_0109845	53.1	0.00000784	N/A	N/A
PHROG	UHGV-0091937_38	phrog_1194	94.1	1.1e-27	N/A	unknown function
UniRef90	UHGV-0091937_38	UniRef90_A0A0R1Q5P9	53.1	0.00000218	N/A	N/A
eggNOG-mapper	UHGV-0091937_38	1400520.LFAB_05290	58.2	0.0000000044	N/A	N/A
Pfam	UHGV-0091937_38	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0091937_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0091937_39	phrog_6616	542.8	0	tail protein	tail
UniRef90	UHGV-0091937_39	UniRef90_A0A0J1FXD9	140.0	5.6e-31	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0091937_39	1294142.CINTURNW_1042	70.5	0.00000000184	Phage minor structural protein	N/A
COG	UHGV-0091937_39	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0091937_39	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0091937_41	PF20622,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0091937_42	411471.SUBVAR_06929	297.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0091937_42	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A