UHGV-0092641 (vOTU-008015)

Viral Genome: UHGV-0092641

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0092641
vOTU ID	vOTU-008015
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_171415
Associated BioSample	SAMEA3136688
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9799
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.35
Jumbo phage	No

Genome content
Genome length (bp)	40,349
GC content	42.37%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	93%
Average CDS length (bps)	624.20
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0092641_1	UniRef90_A0A0K9NAM5	150.0	5.94001e-40	RNA polymerase principal sigma factor, sigma 70	N/A
eggNOG-mapper	UHGV-0092641_1	411462.DORLON_00093	499.0	0	N/A	N/A
KOfam	UHGV-0092641_2	K06131	129.7	3.1e-38	clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]	N/A
UniRef90	UHGV-0092641_2	UniRef90_A0A173WYL4	529.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0092641_2	1280698.AUJS01000016_gene1773	436.0	0	Putative ABC-transporter type IV	N/A
Pfam	UHGV-0092641_2	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0092641_2	COG4905	N/A	N/A	N/A	N/A
KOfam	UHGV-0092641_3	K14059	142.6	4.90034e-42	int; integrase	N/A
PHROG	UHGV-0092641_3	phrog_1	160.8	0	integrase	integration and excision
UniRef90	UHGV-0092641_3	UniRef90_A0A173RBY2	634.0	0	Site-specific tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0092641_3	1280698.AUJS01000007_gene999	465.0	0	Phage integrase family	N/A
Pfam	UHGV-0092641_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0092641_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0092641_3	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_5	phrog_4980	121.7	5.1e-36	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0092641_5	33035.JPJF01000109_gene437	90.9	5.35e-19	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0092641_5	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0092641_5	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0092641_5	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
KOfam	UHGV-0092641_7	K18830	69.3	6.7e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0092641_7	phrog_8	58.5	1.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0092641_7	UniRef90_A0A173RBE6	269.0	0	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0092641_7	1280698.AUJS01000007_gene1002	226.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0092641_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0092641_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0092641_7	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_11	phrog_18631	43.6	0.0000000000049	N/A	unknown function
PHROG	UHGV-0092641_15	phrog_3584	133.3	1.6e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0092641_15	411461.DORFOR_01138	333.0	0	N/A	N/A
structural_annotation	UHGV-0092641_15	PF01446	N/A	N/A	N/A	N/A
KOfam	UHGV-0092641_17	K03469	54.5	0.0000000000000023	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0092641_17	phrog_531	57.1	3.7e-16	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092641_17	UniRef90_A0A6N9JSQ7	266.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0092641_17	1280698.AUJS01000007_gene1015	258.0	0	RNA-DNA hybrid ribonuclease activity	N/A
Pfam	UHGV-0092641_17	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0092641_17	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0092641_17	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
UniRef90	UHGV-0092641_18	UniRef90_UPI0003F6328F	210.0	0	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0092641_18	1235793.C809_01906	80.9	3.11e-17	N/A	N/A
Pfam	UHGV-0092641_18	PF14058	N/A	N/A	PcfK-like protein	PcfK
PHROG	UHGV-0092641_19	phrog_8470	247.6	0	N/A	unknown function
UniRef90	UHGV-0092641_19	UniRef90_UPI001D0719D3	761.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0092641_19	457412.RSAG_01172	182.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0092641_19	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0092641_19	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_20	phrog_15077	128.9	3.7e-38	N/A	unknown function
UniRef90	UHGV-0092641_20	UniRef90_A0A174WLY0	102.0	1.22e-19	N/A	N/A
eggNOG-mapper	UHGV-0092641_20	1280698.AUJS01000007_gene1019	206.0	0	N/A	N/A
structural_annotation	UHGV-0092641_20	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_21	phrog_7566	110.1	8.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-0092641_21	1280698.AUJS01000007_gene1020	231.0	0	N/A	N/A
UniRef90	UHGV-0092641_25	UniRef90_A0A173RC68	177.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0092641_25	457412.RSAG_01162	110.0	1.15e-29	YopX protein	N/A
PHROG	UHGV-0092641_27	phrog_3154	40.7	0.000000000034	N/A	unknown function
UniRef90	UHGV-0092641_27	UniRef90_UPI000CF8F0F1	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-0092641_27	97139.C824_02654	83.2	6.13e-19	N/A	N/A
Pfam	UHGV-0092641_27	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-0092641_27	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092641_27	PF07866,COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092641_28	PF10400	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_33	phrog_26445	41.2	0.00000000000018	N/A	unknown function
UniRef90	UHGV-0092641_33	UniRef90_UPI001EDD5E1E	62.4	0.000000000455	Trp family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0092641_33	742765.HMPREF9457_02112	57.0	0.00000000908	N/A	N/A
structural_annotation	UHGV-0092641_33	PF21220,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0092641_34	K07171	64.3	2.9e-18	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0092641_34	phrog_1936	107.7	9e-32	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0092641_34	UniRef90_UPI0015711440	154.0	3.65739e-43	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0092641_34	411461.DORFOR_01157	150.0	6.57209e-43	N/A	N/A
Pfam	UHGV-0092641_34	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0092641_34	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0092641_34	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_36	phrog_6568	57.4	2.2e-16	N/A	unknown function
PHROG	UHGV-0092641_37	phrog_11237	101.2	1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0092641_37	411461.DORFOR_01161	202.0	0	N/A	N/A
KOfam	UHGV-0092641_38	K06909	426.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0092641_38	phrog_2606	336.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-0092641_38	UniRef90_B0G4H5	1022.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0092641_38	411461.DORFOR_01162	1022.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0092641_38	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0092641_38	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0092641_38	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0092641_38	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0092641_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0092641_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0092641_38	PF04466,PF17288,PF06056,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_39	phrog_533	340.8	0	portal protein	head and packaging
UniRef90	UHGV-0092641_39	UniRef90_A0A173RC48	890.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0092641_39	411461.DORFOR_01163	681.0	0	N/A	N/A
structural_annotation	UHGV-0092641_39	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_40	phrog_581	285.8	0	minor head protein	head and packaging
UniRef90	UHGV-0092641_40	UniRef90_A0A173RCB2	1118.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0092641_40	411461.DORFOR_01164	853.0	0	N/A	N/A
Pfam	UHGV-0092641_40	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0092641_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092641_40	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_42	phrog_355	56.9	4e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092641_42	UniRef90_A0A415UCX1	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-0092641_42	411461.DORFOR_01165	190.0	0	N/A	N/A
Pfam	UHGV-0092641_42	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0092641_42	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_43	phrog_194	98.5	7.9e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0092641_43	UniRef90_A0A173RCF7	387.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0092641_43	411461.DORFOR_01166	236.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0092641_43	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0092641_44	phrog_283	215.7	0	major head protein	head and packaging
UniRef90	UHGV-0092641_44	UniRef90_A0A173REC9	693.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-0092641_44	411461.DORFOR_01167	580.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0092641_44	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0092641_44	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_45	phrog_541	87.8	1.1e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0092641_45	536233.CLO_0887	57.0	0.0000000107	N/A	N/A
PHROG	UHGV-0092641_46	phrog_3366	93.9	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0092641_46	999411.HMPREF1092_03319	59.3	0.00000000278	N/A	N/A
Pfam	UHGV-0092641_46	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0092641_46	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_47	phrog_556	54.3	0.0000000000000019	minor head protein	head and packaging
UniRef90	UHGV-0092641_47	UniRef90_UPI001E609FF9	197.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0092641_47	411461.DORFOR_01170	205.0	0	Minor capsid protein	N/A
Pfam	UHGV-0092641_47	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0092641_47	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_48	phrog_3266	70.7	2e-20	tail completion	connector
structural_annotation	UHGV-0092641_48	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_49	phrog_820	92.5	3.9e-27	major tail protein	tail
UniRef90	UHGV-0092641_49	UniRef90_A0A174M1L1	272.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0092641_49	411461.DORFOR_01172	284.0	0	N/A	N/A
structural_annotation	UHGV-0092641_49	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_50	phrog_4450	71.1	1.7e-20	N/A	unknown function
UniRef90	UHGV-0092641_50	UniRef90_A0A7X3SKC0	90.5	3.48e-21	AP endonuclease	N/A
eggNOG-mapper	UHGV-0092641_50	931276.Cspa_c07520	62.0	0.0000000000814	N/A	N/A
Pfam	UHGV-0092641_50	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0092641_50	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_51	phrog_706	159.1	0	N/A	unknown function
UniRef90	UHGV-0092641_51	UniRef90_A0A173RDK1	384.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0092641_51	411461.DORFOR_01174	209.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0092641_51	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0092641_51	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0092641_52	K10421	54.3	6.5e-16	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0092641_52	phrog_19074	497.5	0	N/A	unknown function
UniRef90	UHGV-0092641_52	UniRef90_A0A173RDD3	1709.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0092641_52	411461.DORFOR_01175	777.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0092641_52	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0092641_52	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0092641_52	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0092641_52	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-0092641_53	UniRef90_UPI0015709E93	305.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0092641_53	411461.DORFOR_01176	392.0	0	N/A	N/A
structural_annotation	UHGV-0092641_53	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_54	phrog_538	221.1	0	minor tail protein	tail
UniRef90	UHGV-0092641_54	UniRef90_UPI001E2C8064	348.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0092641_54	411461.DORFOR_01177	425.0	0	N/A	N/A
Pfam	UHGV-0092641_54	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0092641_54	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_55	phrog_13141	153.8	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0092641_55	UniRef90_UPI00156D68EE	501.0	0	H-type lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0092641_55	411461.DORFOR_01178	265.0	0	N/A	N/A
Pfam	UHGV-0092641_55	PF09458	N/A	N/A	H-type lectin domain	H_lectin
structural_annotation	UHGV-0092641_55	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0092641_56	phrog_19695	60.1	6.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0092641_56	411462.DORLON_00772	88.6	3.67e-22	N/A	N/A
KOfam	UHGV-0092641_57	K21478	73.9	4.1e-22	icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]	N/A
UniRef90	UHGV-0092641_57	UniRef90_A0A367G9J3	333.0	0	NodB homology domain-containing protein	N/A
eggNOG-mapper	UHGV-0092641_57	411462.DORLON_00771	271.0	0	N/A	N/A
Pfam	UHGV-0092641_57	PF01522	N/A	N/A	Polysaccharide deacetylase	Polysacc_deac_1
PHROG	UHGV-0092641_58	phrog_1009	43.9	0.000000000004	N/A	unknown function
UniRef90	UHGV-0092641_58	UniRef90_A0A173RD60	183.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0092641_58	742765.HMPREF9457_03364	173.0	0	N/A	N/A
PHROG	UHGV-0092641_59	phrog_1129	77.0	1.7e-22	holin	lysis
UniRef90	UHGV-0092641_59	UniRef90_UPI001F15FE24	153.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0092641_59	411461.DORFOR_00721	175.0	0	N/A	N/A
Pfam	UHGV-0092641_59	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0092641_59	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0092641_60	K01448	40.1	0.000000000035	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0092641_60	phrog_2742	80.1	3.3e-23	endolysin	lysis
UniRef90	UHGV-0092641_60	UniRef90_A0A845KJG7	565.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0092641_60	411462.DORLON_00764	265.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0092641_60	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0092641_60	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-0092641_60	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0092641_60	PF01520,MF_00562,TIGR02883,COG5492,COG0860	N/A	N/A	N/A	N/A