UHGV-0092700 (vOTU-074370)

Viral Genome: UHGV-0092700

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0092700
vOTU ID	vOTU-074370
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_170009
Associated BioSample	SAMEA3136657
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.974
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.38
Jumbo phage	No

Genome content
Genome length (bp)	39,682
GC content	40.62%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	94%
Average CDS length (bps)	619.15
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0092700_1	UniRef90_A0A1C7HSY4	533.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_1	658659.HMPREF0983_03290	343.0	0	lysozyme activity	N/A
Pfam	UHGV-0092700_1	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0092700_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0092700_1	PF00877,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_2	phrog_1863	44.6	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0092700_2	545697.HMPREF0216_02871	52.8	0.00000011	N/A	N/A
PHROG	UHGV-0092700_4	phrog_16267	141.8	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0092700_4	UniRef90_UPI0008EB4AF8	2015.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_4	552396.HMPREF0863_01647	841.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0092700_4	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0092700_4	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0092700_4	PF05113,PF03944,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_5	phrog_1401	47.3	0.00000000000033	N/A	unknown function
UniRef90	UHGV-0092700_5	UniRef90_A0A7C6P910	55.8	0.000000171	N/A	N/A
eggNOG-mapper	UHGV-0092700_5	1262449.CP6013_3212	57.0	0.0000000105	N/A	N/A
structural_annotation	UHGV-0092700_5	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_6	phrog_2566	48.4	0.00000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0092700_6	1294142.CINTURNW_1040	55.8	0.00000000362	N/A	N/A
PHROG	UHGV-0092700_7	phrog_1194	62.4	7.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0092700_7	552396.HMPREF0863_01645	179.0	0	N/A	N/A
structural_annotation	UHGV-0092700_7	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_8	phrog_37487	476.8	0	N/A	unknown function
UniRef90	UHGV-0092700_8	UniRef90_A0A4R3TDI6	843.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0092700_8	552396.HMPREF0863_01644	602.0	0	phage tail tape measure protein	N/A
COG	UHGV-0092700_8	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_9	phrog_8355	131.4	1.5e-39	N/A	unknown function
UniRef90	UHGV-0092700_9	UniRef90_A0A4R3TDU8	117.0	1.59e-32	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0092700_9	552396.HMPREF0863_01643	116.0	7.64e-33	N/A	N/A
Pfam	UHGV-0092700_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-0092700_10	phrog_8300	120.0	8.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-0092700_10	1232449.BAHV02000018_gene1519	102.0	1.57e-26	N/A	N/A
structural_annotation	UHGV-0092700_10	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_11	phrog_820	123.9	8.8e-37	major tail protein	tail
eggNOG-mapper	UHGV-0092700_11	552396.HMPREF0863_01641	204.0	0	domain, Protein	N/A
COG	UHGV-0092700_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092700_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_12	phrog_2595	102.8	2.6e-30	head-tail connector protein	connector
UniRef90	UHGV-0092700_12	UniRef90_UPI001D0A149F	201.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0092700_12	552396.HMPREF0863_01640	229.0	0	N/A	N/A
Pfam	UHGV-0092700_12	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0092700_12	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_13	phrog_556	62.8	5.7e-18	minor head protein	head and packaging
UniRef90	UHGV-0092700_13	UniRef90_UPI001C3956D2	283.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0092700_13	552396.HMPREF0863_01639	190.0	0	N/A	N/A
PHROG	UHGV-0092700_14	phrog_8710	128.4	2.5e-38	N/A	unknown function
eggNOG-mapper	UHGV-0092700_14	552396.HMPREF0863_01638	204.0	0	N/A	N/A
structural_annotation	UHGV-0092700_14	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_15	phrog_541	80.1	2.6e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-0092700_15	552396.HMPREF0863_01637	226.0	0	N/A	N/A
PHROG	UHGV-0092700_16	phrog_1378	79.4	3.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0092700_16	552396.HMPREF0863_01636	127.0	8.7e-38	N/A	N/A
PHROG	UHGV-0092700_17	phrog_422	321.2	0	major head protein	head and packaging
UniRef90	UHGV-0092700_17	UniRef90_A0A3E2WBR9	430.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0092700_17	552396.HMPREF0863_01635	585.0	0	N/A	N/A
structural_annotation	UHGV-0092700_17	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_18	phrog_2303	161.8	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0092700_18	552396.HMPREF0863_01634	340.0	0	N/A	N/A
PHROG	UHGV-0092700_21	phrog_581	302.9	0	minor head protein	head and packaging
UniRef90	UHGV-0092700_21	UniRef90_A0A6B1RQY7	1086.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0092700_21	552396.HMPREF0863_01630	872.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0092700_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-0092700_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_22	phrog_533	294.7	0	portal protein	head and packaging
UniRef90	UHGV-0092700_22	UniRef90_A0A1C6JYD4	518.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0092700_22	552396.HMPREF0863_01629	929.0	0	N/A	N/A
structural_annotation	UHGV-0092700_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0092700_23	K06909	88.1	1.4e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0092700_23	phrog_2	71.8	1.5e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0092700_23	UniRef90_U5F7S3	865.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0092700_23	552396.HMPREF0863_01628	865.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0092700_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0092700_23	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0092700_24	K07474	94.1	2.8e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0092700_24	phrog_2606	304.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0092700_24	UniRef90_UPI001C392722	558.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0092700_24	428127.EUBDOL_01230	239.0	0	terminase (Small subunit)	N/A
Pfam	UHGV-0092700_24	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0092700_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0092700_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0092700_24	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_25	phrog_1233	90.1	2.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0092700_25	1232449.BAHV02000018_gene1535	146.0	7.9874e-44	N/A	N/A
PHROG	UHGV-0092700_27	phrog_419	102.3	5.9e-30	N/A	unknown function
UniRef90	UHGV-0092700_27	UniRef90_A6MAI4	154.0	0	Gp119	N/A
eggNOG-mapper	UHGV-0092700_27	388452.A6MAI4_9CAUD	154.0	0	N/A	N/A
PHROG	UHGV-0092700_28	phrog_3243	83.7	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0092700_28	428127.EUBDOL_01231	404.0	0	N/A	N/A
structural_annotation	UHGV-0092700_28	PF15072,MF_00075,TIGR00008,COG0361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092700_29	PF05263,MF_00245,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_31	phrog_2776	60.3	7.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0092700_31	697329.Rumal_3412	186.0	0	N/A	N/A
structural_annotation	UHGV-0092700_31	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_32	phrog_4400	104.3	9.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0092700_32	886882.PPSC2_p0514	70.5	0.0000000000354	N/A	N/A
dbAPIS	UHGV-0092700_32	APIS008	N/A	N/A	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	N/A
KOfam	UHGV-0092700_33	K03111	154.8	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0092700_33	phrog_44	154.4	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092700_33	UniRef90_UPI001C384F19	268.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0092700_33	658659.HMPREF0983_02345	276.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0092700_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0092700_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0092700_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0092700_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0092700_33	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_34	phrog_98	92.3	4.3e-27	N/A	unknown function
UniRef90	UHGV-0092700_34	UniRef90_G1VRY7	258.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_34	1499683.CCFF01000017_gene2588	132.0	7.75e-38	YopX protein	N/A
Pfam	UHGV-0092700_34	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0092700_34	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0092700_34	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0092700_35	UniRef90_A0A318KPZ6	211.0	0	E2/UBC family protein D	N/A
Pfam	UHGV-0092700_35	PF14460	N/A	N/A	Prokaryotic E2 family D	Prok-E2_D
structural_annotation	UHGV-0092700_35	PF14460,TIGR03737	N/A	N/A	N/A	N/A
KOfam	UHGV-0092700_37	K03148	73.6	2.4e-21	thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]	N/A
UniRef90	UHGV-0092700_37	UniRef90_G1VRY4	427.0	0	ThiF domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_37	428127.EUBDOL_01242	327.0	0	ThiF family	N/A
PADLOC	UHGV-0092700_37	E1E2_00006	42.0	0.00000000001	E1-E2	CBASS
Pfam	UHGV-0092700_37	PF00899	N/A	N/A	ThiF family	ThiF
COG	UHGV-0092700_37	COG0476	N/A	N/A	Molybdopterin or thiamine biosynthesis adenylyltransferase	N/A
structural_annotation	UHGV-0092700_37	PF00899,MF_03049,TIGR03736,COG0476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092700_39	PF02768,PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
KOfam	UHGV-0092700_41	K02086	71.2	1.1e-21	dnaD; DNA replication protein	N/A
PHROG	UHGV-0092700_41	phrog_5708	232.2	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092700_41	UniRef90_G1VRY0	521.0	0	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_41	1415774.U728_867	175.0	0	DnaD domain protein	N/A
Pfam	UHGV-0092700_41	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0092700_41	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0092700_41	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0092700_41	PF07261,PF09681,TIGR01446,TIGR01714,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_43	phrog_190	134.3	7.5e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092700_43	UniRef90_A0A898FYV2	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0092700_43	445974.CLORAM_02947	125.0	2.5e-35	N/A	N/A
Pfam	UHGV-0092700_43	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0092700_43	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092700_44	PF16454,NF007974	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_45	phrog_6244	68.9	9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0092700_45	508419.F8J183_9CAUD	59.3	0.00000000109	N/A	N/A
PHROG	UHGV-0092700_46	phrog_2760	187.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092700_46	UniRef90_A0A3A6DAQ7	551.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0092700_46	86416.Clopa_4307	191.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-0092700_46	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0092700_46	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0092700_46	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0092700_46	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0092700_50	phrog_2113	56.4	4.5e-16	N/A	unknown function
UniRef90	UHGV-0092700_50	UniRef90_A0A847CHZ4	71.2	0.0000000000000708	HTH domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_50	1160721.RBI_I00213	59.7	0.00000000033	N/A	N/A
KOfam	UHGV-0092700_54	K07741	218.8	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0092700_54	phrog_63	167.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0092700_54	UniRef90_UPI000E49576D	419.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0092700_54	1123263.AUKY01000076_gene1778	316.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0092700_54	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0092700_54	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0092700_54	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0092700_54	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0092700_57	K18830	65.8	9.8e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0092700_57	phrog_8	56.6	5.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0092700_57	UniRef90_UPI001E5FEC8A	244.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0092700_57	999413.HMPREF1094_02044	127.0	3.72e-36	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0092700_57	retron_type_VI_hth_cluster2_1	48.2	0.0000000000000013	N/A	Retron
Pfam	UHGV-0092700_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0092700_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0092700_57	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0092700_59	1499683.CCFF01000014_gene3659	82.0	2.51e-16	N/A	N/A
KOfam	UHGV-0092700_60	K14059	204.6	0	int; integrase	N/A
PHROG	UHGV-0092700_60	phrog_1	188.7	0	integrase	integration and excision
UniRef90	UHGV-0092700_60	UniRef90_UPI001C37EA58	569.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0092700_60	908340.HMPREF9406_2610	267.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0092700_60	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0092700_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
Pfam	UHGV-0092700_60	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
COG	UHGV-0092700_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0092700_60	PF00589,PF13102,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A