UHGV-0094806 (vOTU-114764)

Viral Genome: UHGV-0094806

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0094806
vOTU ID	vOTU-114764
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_175445
Associated BioSample	SAMEA3491317
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.23 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	26
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.972
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	54.19
Jumbo phage	No

Genome content
Genome length (bp)	32,686
GC content	37.84%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	93%
Average CDS length (bps)	677.27
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0094806_1	phrog_38762	76.6	4e-22	N/A	unknown function
KOfam	UHGV-0094806_2	K01447	98.0	1.4e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0094806_2	phrog_9611	149.4	1.96182e-44	endolysin	lysis
UniRef90	UHGV-0094806_2	UniRef90_A0A242D143	516.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_2	565653.EGBG_01985	298.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0094806_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0094806_2	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0094806_2	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_3	phrog_199	75.9	5e-22	holin	lysis
UniRef90	UHGV-0094806_3	UniRef90_A0A376H549	291.0	0	Holin	N/A
eggNOG-mapper	UHGV-0094806_3	1260356.D920_01818	189.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0094806_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0094806_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0094806_3	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0094806_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_5	phrog_4311	632.5	0	minor head protein	head and packaging
UniRef90	UHGV-0094806_5	UniRef90_UPI00115D461D	1127.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0094806_5	663241.C9E2K6_9CAUD	402.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0094806_5	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0094806_5	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0094806_5	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_6	phrog_5240	82.5	6.3e-24	tail fiber protein	tail
UniRef90	UHGV-0094806_6	UniRef90_A0A679IAI4	909.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_6	1158604.I591_00414	239.0	0	GDSL-like Lipase/Acylhydrolase	N/A
COG	UHGV-0094806_6	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0094806_7	phrog_1067	433.5	0	minor head protein	head and packaging
UniRef90	UHGV-0094806_7	UniRef90_A0A376H304	1695.0	0	Phage minor structural protein, N-terminal region domain protein	N/A
eggNOG-mapper	UHGV-0094806_7	226185.EF_2001	957.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0094806_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0094806_7	PF21277	N/A	N/A	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
NCBIFam	UHGV-0094806_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0094806_7	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0094806_8	phrog_33	71.8	1.6e-20	distal tail protein Dit	tail
UniRef90	UHGV-0094806_8	UniRef90_UPI001C8B5E9C	479.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0094806_8	1158602.I590_02575	356.0	0	tail component	N/A
COG	UHGV-0094806_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0094806_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_9	phrog_6900	275.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0094806_9	UniRef90_UPI00189E6A9F	552.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0094806_9	374526.A5GYM8_9CAUD	292.0	0	N/A	N/A
structural_annotation	UHGV-0094806_9	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_10	phrog_1294	48.4	0.00000000000014	peptide methionine sulfoxide reductase	other
PHROG	UHGV-0094806_11	phrog_1021	50.4	0.000000000000043	N/A	unknown function
PHROG	UHGV-0094806_13	phrog_885	223.0	0	major tail protein	tail
UniRef90	UHGV-0094806_13	UniRef90_A0A098ANP7	183.0	0	Putative prophage protein	N/A
eggNOG-mapper	UHGV-0094806_13	1158602.I590_02571	236.0	0	N/A	N/A
structural_annotation	UHGV-0094806_13	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_14	phrog_957	110.8	6.8e-33	head protein	head and packaging
eggNOG-mapper	UHGV-0094806_14	1158602.I590_02570	158.0	0	N/A	N/A
PHROG	UHGV-0094806_15	phrog_5	64.8	2.2e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0094806_15	UniRef90_UPI00189CEA4A	217.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0094806_15	1158602.I590_02569	216.0	0	N/A	N/A
Pfam	UHGV-0094806_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0094806_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0094806_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_16	phrog_1059	101.2	5.9e-30	head-tail adaptor	connector
UniRef90	UHGV-0094806_16	UniRef90_A0A3D1J9B0	216.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0094806_16	1123312.KB904569_gene351	63.2	0.0000000000172	N/A	N/A
structural_annotation	UHGV-0094806_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_17	phrog_1236	223.0	0	head protein	head and packaging
UniRef90	UHGV-0094806_17	UniRef90_R9QLM1	176.0	0	Structural protein	N/A
eggNOG-mapper	UHGV-0094806_17	1158602.I590_02567	234.0	0	N/A	N/A
structural_annotation	UHGV-0094806_17	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_18	phrog_15682	43.1	0.0000000000068	N/A	unknown function
eggNOG-mapper	UHGV-0094806_18	1497679.EP56_07560	63.9	0.00000000000564	N/A	N/A
PHROG	UHGV-0094806_19	phrog_212	278.7	0	major head protein	head and packaging
UniRef90	UHGV-0094806_19	UniRef90_UPI00189E8B07	567.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0094806_19	1196028.ALEF01000043_gene464	448.0	0	N/A	N/A
structural_annotation	UHGV-0094806_19	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_20	phrog_194	88.9	8e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0094806_20	UniRef90_A0A376H811	338.0	0	Scaffold protein	N/A
eggNOG-mapper	UHGV-0094806_20	1140001.I571_01833	192.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0094806_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0094806_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_23	phrog_5859	142.3	9.40271e-43	N/A	unknown function
eggNOG-mapper	UHGV-0094806_23	565664.EFXG_02666	120.0	8.57e-34	N/A	N/A
structural_annotation	UHGV-0094806_23	PF03927,MF_02200,NF009840,COG3471	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_24	phrog_595	270.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0094806_24	UniRef90_UPI001C8B149A	506.0	0	phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0094806_24	1158602.I590_02559	360.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0094806_24	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0094806_24	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_25	phrog_64	322.4	0	portal protein	head and packaging
UniRef90	UHGV-0094806_25	UniRef90_A0A376H642	957.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0094806_25	1158602.I590_02557	800.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0094806_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0094806_25	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0094806_26	K06909	364.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0094806_26	phrog_3717	250.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0094806_26	UniRef90_R2RM60	750.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0094806_26	1158602.I590_02556	750.0	0	Terminase-like family	N/A
Pfam	UHGV-0094806_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0094806_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0094806_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0094806_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0094806_26	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0094806_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_27	phrog_2538	128.8	2.6e-38	terminase small subunit	head and packaging
UniRef90	UHGV-0094806_27	UniRef90_A0A366UAA0	178.0	0	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_27	1140002.I570_01447	148.0	5.60519e-45	Helix-turn-helix of insertion element transposase	N/A
Pfam	UHGV-0094806_27	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0094806_27	PF13022	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_28	phrog_248	105.0	8.2e-31	transcriptional activator	transcription regulation
UniRef90	UHGV-0094806_28	UniRef90_A0A376H1S6	238.0	0	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-0094806_28	1104325.M7W_1345	140.0	2.68993e-41	N/A	N/A
NCBIFam	UHGV-0094806_28	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0094806_28	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0094806_29	K07741	117.3	3.6e-34	antB; anti-repressor protein	N/A
PHROG	UHGV-0094806_29	phrog_373	163.7	0	anti-repressor	transcription regulation
UniRef90	UHGV-0094806_29	UniRef90_A0A376H653	403.0	0	Putative phage-encoded protein-like protein	N/A
eggNOG-mapper	UHGV-0094806_29	416870.llmg_0797	196.0	0	ORF6C domain	N/A
Pfam	UHGV-0094806_29	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0094806_29	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0094806_29	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0094806_29	PF10552,PF08346,NF008573,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_30	phrog_1672	107.9	6.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-0094806_30	1158610.UC3_02371	120.0	2.41e-32	N/A	N/A
PHROG	UHGV-0094806_32	phrog_2562	232.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094806_32	UniRef90_A0A5F0UZU9	593.0	0	N/A	N/A
eggNOG-mapper	UHGV-0094806_32	1231377.C426_1964	183.0	0	N/A	N/A
Pfam	UHGV-0094806_32	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0094806_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0094806_33	K07455	231.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0094806_33	phrog_148	240.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094806_33	UniRef90_A0A3D1JB74	530.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0094806_33	1104325.M7W_1336	364.0	0	RecT family	N/A
Pfam	UHGV-0094806_33	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0094806_33	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0094806_33	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0094806_33	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_34	phrog_434	374.9	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094806_34	UniRef90_A0A366U644	593.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_34	1140001.I571_02083	521.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0094806_34	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0094806_34	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0094806_34	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0094806_34	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0094806_36	UniRef90_UPI001D177A73	101.0	4.07e-27	nucleoporin NDC1	N/A
UniRef90	UHGV-0094806_37	UniRef90_T0U613	149.0	1.4013e-45	HTH_17 domain-containing protein	N/A
Pfam	UHGV-0094806_37	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0094806_38	phrog_1124	80.9	1.2e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0094806_38	UniRef90_UPI001C0F5954	120.0	4.49e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_38	945021.TEH_08340	129.0	1.6e-35	N/A	N/A
structural_annotation	UHGV-0094806_38	PF01381,TIGR02607,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094806_39	1158601.I585_00727	104.0	1.73e-28	N/A	N/A
structural_annotation	UHGV-0094806_39	NF005233	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_40	phrog_32094	158.7	0	N/A	unknown function
PHROG	UHGV-0094806_41	phrog_32653	110.0	8.9e-33	N/A	unknown function
KOfam	UHGV-0094806_42	K07729	74.2	2.5e-21	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0094806_42	phrog_3	51.3	0.000000000000047	transcriptional repressor	transcription regulation
UniRef90	UHGV-0094806_42	UniRef90_A0A366U6B5	144.0	1.23314e-43	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_42	1273103.NM10_06891	64.7	0.000000000000506	sequence-specific DNA binding	N/A
PADLOC	UHGV-0094806_42	retron_type_VI_hth_cluster2_1	55.9	0.0000000000000013	N/A	Retron
Pfam	UHGV-0094806_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0094806_42	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0094806_42	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0094806_43	K22299	77.8	2.1e-22	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0094806_43	UniRef90_A0A366U4L5	185.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0094806_43	1234679.BN424_1889	108.0	6.19e-29	Helix-turn-helix	N/A
Pfam	UHGV-0094806_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0094806_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0094806_44	phrog_87	81.2	1.1e-23	metallo-protease	other
UniRef90	UHGV-0094806_44	UniRef90_UPI0010FF637B	268.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0094806_44	565653.EGBG_03031	180.0	0	N/A	N/A
COG	UHGV-0094806_44	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0094806_44	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0094806_45	phrog_1847	469.4	0	N/A	unknown function
UniRef90	UHGV-0094806_45	UniRef90_UPI001E3FBC15	712.0	0	N/A	N/A
eggNOG-mapper	UHGV-0094806_45	1158604.I591_00760	461.0	0	N/A	N/A
Pfam	UHGV-0094806_45	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-0094806_45	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0094806_45	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-0094806_45	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A