UHGV-0096066 (vOTU-033975)

Viral Genome: UHGV-0096066

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0096066
vOTU ID	vOTU-033975
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_208457
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.5 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.982
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.79
Jumbo phage	No

Genome content
Genome length (bp)	25,120
GC content	36.66%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	93%
Average CDS length (bps)	930.36
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0096066_1	K07474	90.9	2.9e-26	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0096066_1	phrog_2606	182.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0096066_1	UniRef90_A0A366KJ58	543.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0096066_1	257314.LJ_0307	437.0	0	Terminase small subunit	N/A
Pfam	UHGV-0096066_1	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0096066_1	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0096066_1	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0096066_1	PF03592,PF06056,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0096066_2	K06909	156.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0096066_2	phrog_10250	221.3	0	N/A	unknown function
UniRef90	UHGV-0096066_2	UniRef90_Q65PU5	823.0	0	Lj965 prophage terminase large subunit	N/A
eggNOG-mapper	UHGV-0096066_2	257314.LJ_0308	823.0	0	Terminase-like family	N/A
Pfam	UHGV-0096066_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0096066_2	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0096066_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0096066_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0096066_2	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_3	phrog_64	383.8	0	portal protein	head and packaging
UniRef90	UHGV-0096066_3	UniRef90_Q65PU4	939.0	0	Lj965 prophage portal protein	N/A
eggNOG-mapper	UHGV-0096066_3	257314.LJ_0309	939.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0096066_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0096066_3	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0096066_3	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0096066_4	K07584	60.7	2.9e-17	N/A	N/A
PHROG	UHGV-0096066_4	phrog_4478	78.7	5.4e-23	peptidase	other
UniRef90	UHGV-0096066_4	UniRef90_A0A366KHC2	182.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0096066_4	257314.LJ_0310	167.0	0	Cysteine protease Prp	N/A
Pfam	UHGV-0096066_4	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0096066_4	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_5	phrog_115	257.0	0	minor head protein	head and packaging
UniRef90	UHGV-0096066_5	UniRef90_Q65PU2	673.0	0	Lj965 prophage minor head protein	N/A
eggNOG-mapper	UHGV-0096066_5	257314.LJ_0311	673.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0096066_5	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0096066_5	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0096066_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096066_5	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_6	phrog_172	143.2	1.99965e-42	head scaffolding protein	head and packaging
UniRef90	UHGV-0096066_6	UniRef90_A0A8A8L7A9	394.0	0	N/A	N/A
eggNOG-mapper	UHGV-0096066_6	257314.LJ_0312	350.0	0	N/A	N/A
Pfam	UHGV-0096066_6	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0096066_6	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_7	phrog_909	103.5	1.3e-30	major head protein	head and packaging
eggNOG-mapper	UHGV-0096066_7	257314.LJ_0313	202.0	0	N/A	N/A
PHROG	UHGV-0096066_8	phrog_29	243.8	0	major head protein	head and packaging
UniRef90	UHGV-0096066_8	UniRef90_A0A366KHD5	682.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0096066_8	257314.LJ_0314	632.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0096066_8	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0096066_8	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_9	phrog_132	51.2	0.000000000000021	head-tail adaptor	connector
UniRef90	UHGV-0096066_9	UniRef90_A0A8A4UWP8	182.0	0	Phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0096066_9	257314.LJ_0315	167.0	0	N/A	N/A
Pfam	UHGV-0096066_9	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0096066_9	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_10	phrog_2168	148.5	1.4013e-44	N/A	unknown function
UniRef90	UHGV-0096066_10	UniRef90_A0A0R1UW44	152.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0096066_10	257314.LJ_0316	209.0	0	N/A	N/A
structural_annotation	UHGV-0096066_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_11	phrog_5	70.5	3.5e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-0096066_11	UniRef90_A0A7W3UJW0	302.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0096066_11	257314.LJ_0317	312.0	0	N/A	N/A
Pfam	UHGV-0096066_11	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0096066_11	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0096066_11	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096066_12	UniRef90_A0A0R2G0R1	132.0	1.05e-37	N/A	N/A
eggNOG-mapper	UHGV-0096066_12	257314.LJ_0318	214.0	0	N/A	N/A
structural_annotation	UHGV-0096066_12	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_13	phrog_158	87.0	3e-25	major tail protein	tail
UniRef90	UHGV-0096066_13	UniRef90_F4AH32	314.0	0	Phage major tail protein	N/A
eggNOG-mapper	UHGV-0096066_13	257314.LJ_0319	271.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0096066_13	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0096066_13	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_14	phrog_183	69.1	7.2e-20	tail chaperone protein	tail
UniRef90	UHGV-0096066_14	UniRef90_A0A0U5JYD4	225.0	0	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0096066_14	257314.LJ_0320	239.0	0	N/A	N/A
Pfam	UHGV-0096066_14	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0096066_14	PF19591,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_15	phrog_2066	108.3	4.8e-32	N/A	unknown function
UniRef90	UHGV-0096066_15	UniRef90_A0A0R2GAJ5	99.8	3.25e-25	N/A	N/A
eggNOG-mapper	UHGV-0096066_15	257314.LJ_0321	156.0	0	N/A	N/A
PHROG	UHGV-0096066_16	phrog_1535	700.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0096066_16	UniRef90_F4AC87	2530.0	0	Putative phage minor tail protein	N/A
eggNOG-mapper	UHGV-0096066_16	257314.LJ_0322	2495.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0096066_16	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_17	phrog_1194	122.4	2e-36	N/A	unknown function
UniRef90	UHGV-0096066_17	UniRef90_A0A0R1VMM5	135.0	5.27e-39	N/A	N/A
eggNOG-mapper	UHGV-0096066_17	257314.LJ_0323	217.0	0	N/A	N/A
Pfam	UHGV-0096066_17	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0096066_17	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_18	phrog_22212	464.7	0	N/A	unknown function
UniRef90	UHGV-0096066_18	UniRef90_A0A4S2F369	741.0	0	Peptidase (Fragment)	N/A
eggNOG-mapper	UHGV-0096066_18	257314.LJ_0324	879.0	0	gp58-like protein	N/A
COG	UHGV-0096066_18	COG0845	N/A	N/A	Multidrug efflux pump subunit AcrA (membrane-fusion protein)	N/A
structural_annotation	UHGV-0096066_18	PF05113,PF09327,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_19	phrog_1330	266.1	0	tail protein	tail
UniRef90	UHGV-0096066_19	UniRef90_A0A366KHU9	2015.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096066_19	257314.LJ_0324	1016.0	0	gp58-like protein	N/A
Pfam	UHGV-0096066_19	PF07902	N/A	N/A	gp58-like protein	Gp58
COG	UHGV-0096066_19	COG0845	N/A	N/A	Multidrug efflux pump subunit AcrA (membrane-fusion protein)	N/A
PHROG	UHGV-0096066_20	phrog_13529	90.2	1.2e-26	N/A	unknown function
PHROG	UHGV-0096066_21	phrog_2566	104.8	4e-31	N/A	unknown function
UniRef90	UHGV-0096066_21	UniRef90_A8U7X4	61.6	0.000000000108	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0096066_21	257314.LJ_0325	155.0	0	N/A	N/A
PHROG	UHGV-0096066_22	phrog_4325	146.7	8.12753e-44	holin	lysis
UniRef90	UHGV-0096066_22	UniRef90_B8R662	80.1	1.02e-16	Holin	N/A
eggNOG-mapper	UHGV-0096066_22	97137.C821_00023	104.0	3.59e-27	N/A	N/A
structural_annotation	UHGV-0096066_22	PF14248,COG2259	N/A	N/A	N/A	N/A
PHROG	UHGV-0096066_23	phrog_3671	61.2	1.6e-17	N/A	unknown function
PHROG	UHGV-0096066_24	phrog_19508	245.0	0	holin	lysis
UniRef90	UHGV-0096066_24	UniRef90_Q38316	213.0	0	Holin	N/A
KOfam	UHGV-0096066_25	K07273	142.0	5.70048e-42	acm; lysozyme	N/A
PHROG	UHGV-0096066_25	phrog_291	244.4	0	endolysin	lysis
UniRef90	UHGV-0096066_25	UniRef90_A0A366KHI3	636.0	0	Lysin	N/A
eggNOG-mapper	UHGV-0096066_25	324831.LGAS_0632	493.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0096066_25	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0096066_25	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0096066_25	PF01183,PF08460,MF_00496,NF033202,NF009621,COG3757	N/A	N/A	N/A	N/A