UHGV-0096169 (vOTU-107851)

Viral Genome: UHGV-0096169

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0096169
vOTU ID	vOTU-107851
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_233238
Associated BioSample	SAMEA3708662
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.41 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.976
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.94
Jumbo phage	No

Genome content
Genome length (bp)	18,578
GC content	45.47%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	94%
Average CDS length (bps)	697.92
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0096169_1	phrog_2245	93.5	2.3e-27	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0096169_1	UniRef90_A0A4U9RLZ8	79.3	4.01e-17	N/A	N/A
eggNOG-mapper	UHGV-0096169_1	1519439.JPJG01000059_gene1914	70.1	0.0000000000000607	N/A	N/A
PHROG	UHGV-0096169_3	phrog_36	59.2	9e-17	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0096169_3	PF07374,TIGR01637	N/A	N/A	N/A	N/A
KOfam	UHGV-0096169_5	K07451	42.9	0.000000000009	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0096169_5	phrog_144	68.2	1.4e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096169_5	UniRef90_UPI0005937579	157.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0096169_5	887929.HMP0721_1270	112.0	4.58e-31	HNH nucleases	N/A
Pfam	UHGV-0096169_5	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0096169_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0096169_6	phrog_1066	132.4	1.6e-39	N/A	unknown function
UniRef90	UHGV-0096169_6	UniRef90_A0A0D0SQQ8	109.0	1.32e-28	N/A	N/A
eggNOG-mapper	UHGV-0096169_6	742740.HMPREF9474_04308	166.0	0	N/A	N/A
structural_annotation	UHGV-0096169_6	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_7	phrog_9	325.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0096169_7	UniRef90_UPI00073E3369	950.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0096169_7	411471.SUBVAR_05848	912.0	0	large subunit	N/A
Pfam	UHGV-0096169_7	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0096169_7	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0096169_7	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0096169_7	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_8	phrog_12	110.4	1.4e-32	portal protein	head and packaging
UniRef90	UHGV-0096169_8	UniRef90_A0A8J6PFS2	639.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0096169_8	411471.SUBVAR_05850	593.0	0	Phage portal protein	N/A
Pfam	UHGV-0096169_8	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0096169_8	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0096169_8	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0096169_9	K06904	118.1	1.1e-34	N/A	N/A
PHROG	UHGV-0096169_9	phrog_80	137.0	2.1e-40	head maturation protease	head and packaging
UniRef90	UHGV-0096169_9	UniRef90_A0A1C5W530	299.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0096169_9	411471.SUBVAR_05851	281.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0096169_9	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0096169_9	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0096169_9	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0096169_9	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_10	phrog_10	153.5	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-0096169_10	UniRef90_UPI00073E62C9	569.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0096169_10	626523.GCWU000342_01025	311.0	0	Phage capsid family	N/A
Pfam	UHGV-0096169_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0096169_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0096169_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0096169_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_11	phrog_5223	89.8	1.8e-26	neck protein	connector
UniRef90	UHGV-0096169_11	UniRef90_UPI00073F29ED	145.0	1.16308e-43	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0096169_11	411471.SUBVAR_05853	140.0	3.62936e-42	N/A	N/A
NCBIFam	UHGV-0096169_11	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0096169_11	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_12	phrog_1951	70.7	1.9e-20	head-tail adaptor	connector
UniRef90	UHGV-0096169_12	UniRef90_A0A8J6P6R3	118.0	6.38e-33	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0096169_12	411471.SUBVAR_05854	113.0	5.7e-32	N/A	N/A
structural_annotation	UHGV-0096169_12	PF05354,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_13	phrog_5	50.9	0.000000000000044	tail completion or Neck1 protein	connector
UniRef90	UHGV-0096169_13	UniRef90_UPI00073E355A	177.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0096169_13	1408311.JNJM01000036_gene53	106.0	8.12e-28	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0096169_13	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0096169_13	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_14	phrog_78	46.3	0.00000000000088	tail terminator	connector
UniRef90	UHGV-0096169_14	UniRef90_U2SBX3	99.0	6.58e-25	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0096169_14	411471.SUBVAR_05856	119.0	6.75e-34	N/A	N/A
structural_annotation	UHGV-0096169_14	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_15	phrog_88	162.6	0	major tail protein	tail
UniRef90	UHGV-0096169_15	UniRef90_D1PND6	259.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0096169_15	411471.SUBVAR_05857	259.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0096169_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0096169_15	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_16	phrog_709	112.6	7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0096169_16	411471.SUBVAR_05858	183.0	0	N/A	N/A
structural_annotation	UHGV-0096169_16	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_17	phrog_5755	161.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0096169_17	UniRef90_UPI000C7C3162	368.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0096169_17	1123263.AUKY01000046_gene477	255.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0096169_17	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0096169_17	PF20155,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_18	phrog_33	69.2	1.1e-19	distal tail protein Dit	tail
UniRef90	UHGV-0096169_18	UniRef90_A0A1C6H6D2	256.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0096169_18	1160721.RBI_I01575	142.0	6.55e-39	Phage tail protein	N/A
COG	UHGV-0096169_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0096169_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_19	phrog_1067	420.1	0	minor head protein	head and packaging
UniRef90	UHGV-0096169_19	UniRef90_A0A1C6H6B4	652.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0096169_19	1160721.RBI_I01574	434.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0096169_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0096169_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0096169_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0096169_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_20	phrog_16573	59.7	3e-17	N/A	unknown function
UniRef90	UHGV-0096169_20	UniRef90_A0A0D8IYB2	626.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0096169_20	665956.HMPREF1032_03918	266.0	0	prophage protein Bartonella henselae str. Houston-1 gi 49237922 emb CAF27125.1	N/A
Pfam	UHGV-0096169_20	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0096169_21	PF21253,NF038128,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096169_22	PF11514	N/A	N/A	N/A	N/A
PHROG	UHGV-0096169_23	phrog_11037	58.4	1.3e-16	N/A	unknown function
UniRef90	UHGV-0096169_23	UniRef90_A0A372V7Z4	566.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096169_23	665956.HMPREF1032_03271	279.0	0	N/A	N/A
structural_annotation	UHGV-0096169_23	PF01551,NF040883,COG0739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096169_24	33035.JPJF01000090_gene94	74.3	4.92e-16	N/A	N/A
PHROG	UHGV-0096169_25	phrog_881	85.4	3.7e-25	holin	lysis
UniRef90	UHGV-0096169_25	UniRef90_A0A4Q7P349	119.0	9.58e-34	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0096169_25	742740.HMPREF9474_02251	119.0	1.23e-34	Putative phage holin Dp-1	N/A
Pfam	UHGV-0096169_25	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0096169_25	PF16938	N/A	N/A	N/A	N/A