UHGV-0096829 (vOTU-051350)

Viral Genome: UHGV-0096829

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0096829
vOTU ID	vOTU-051350
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_214643
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9754
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.01
Jumbo phage	No

Genome content
Genome length (bp)	41,573
GC content	53.32%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	89%
Average CDS length (bps)	551.60
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0096829_6	phrog_16490	99.6	3.9e-38	N/A	unknown function
eggNOG-mapper	UHGV-0096829_6	1408437.JNJN01000043_gene803	155.0	1.84971e-43	N/A	N/A
eggNOG-mapper	UHGV-0096829_7	1408437.JNJN01000043_gene802	119.0	2.6e-33	N/A	N/A
eggNOG-mapper	UHGV-0096829_8	1408437.JNJN01000043_gene801	94.0	4.68e-21	N/A	N/A
KOfam	UHGV-0096829_9	K14059	178.2	0	int; integrase	N/A
PHROG	UHGV-0096829_9	phrog_1	165.3	0	integrase	integration and excision
UniRef90	UHGV-0096829_9	UniRef90_A0A367GI93	198.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_9	1507.HMPREF0262_00307	152.0	1.18e-39	Phage integrase family	N/A
Pfam	UHGV-0096829_9	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0096829_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0096829_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0096829_9	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_10	phrog_1373	43.4	0.0000000000033	transcriptional regulator	transcription regulation
UniRef90	UHGV-0096829_10	UniRef90_A0A2A7B6N3	310.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0096829_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0096829_10	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0096829_13	K02342	77.8	1.4e-22	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0096829_13	phrog_192	94.4	1.1e-27	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096829_13	UniRef90_A0A5D0XSQ8	75.5	0.0000000000166	Exonuclease	N/A
eggNOG-mapper	UHGV-0096829_13	665956.HMPREF1032_02791	120.0	1.52e-27	N/A	N/A
PADLOC	UHGV-0096829_13	cd06127	73.7	5.7e-21	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0096829_13	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0096829_13	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0096829_13	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0096829_13	PF13361,PF00533,MF_00157,NF008746,COG2925	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096829_14	PF06776,COG5342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096829_17	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096829_18	UniRef90_A0A2A7AM72	191.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_18	1378168.N510_01712	62.0	0.000000000549	N/A	N/A
structural_annotation	UHGV-0096829_18	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096829_19	UniRef90_UPI000BEF0F65	88.2	8.7e-22	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0096829_19	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096829_25	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096829_26	UniRef90_A0A098GES5	132.0	1.16e-37	Putative phage associated protein	N/A
structural_annotation	UHGV-0096829_26	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
COG	UHGV-0096829_29	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0096829_29	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_30	phrog_72	54.5	0.0000000000000023	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0096829_30	411471.SUBVAR_05829	139.0	3.66e-39	N/A	N/A
structural_annotation	UHGV-0096829_30	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_31	phrog_7566	80.9	1.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0096829_31	411471.SUBVAR_05830	103.0	1.84e-27	N/A	N/A
KOfam	UHGV-0096829_32	K03111	137.5	1.50001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0096829_32	phrog_44	139.4	2.29995e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096829_32	UniRef90_A0A2A7B6R5	299.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0096829_32	748224.HMPREF9436_00638	207.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0096829_32	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0096829_32	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0096829_32	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0096829_32	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0096829_32	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_33	phrog_6969	58.7	9.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0096829_33	1232446.BAIE02000002_gene816	65.5	0.000000000923	N/A	N/A
Pfam	UHGV-0096829_33	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-0096829_33	PF04182,MF_01819,TIGR04176,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0096829_34	K03496	216.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0096829_34	phrog_164	155.0	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096829_34	UniRef90_A0A2A7B6H3	504.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_34	411471.SUBVAR_05839	224.0	0	AAA domain	N/A
Pfam	UHGV-0096829_34	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0096829_34	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0096829_34	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0096829_35	K03497	82.7	7.3e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0096829_35	phrog_4715	112.1	5.1e-33	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096829_35	UniRef90_A0A2A7B6Q0	502.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_35	411471.SUBVAR_05842	179.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0096829_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0096829_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0096829_35	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096829_36	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_39	phrog_56	97.0	8.9e-30	DNA methyltransferase	other
UniRef90	UHGV-0096829_39	UniRef90_UPI001C01192B	384.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0096829_39	1236504.HMPREF2132_01695	167.0	1.4013e-45	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0096829_39	MTase_II_00075	58.0	2.8e-31	Type II methyltransferase	RM
Pfam	UHGV-0096829_39	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0096829_39	NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_40	phrog_119	60.8	2.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096829_40	UniRef90_A0A2A7B6I3	245.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_40	610130.Closa_0739	114.0	3.32e-31	HNH nucleases	N/A
Pfam	UHGV-0096829_40	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0096829_40	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0096829_41	phrog_13845	64.7	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0096829_41	508419.F8J158_9CAUD	77.4	1.1e-16	N/A	N/A
Pfam	UHGV-0096829_41	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0096829_41	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_42	phrog_9	240.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0096829_42	UniRef90_A0A2A7ALT4	1067.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0096829_42	610130.Closa_0741	627.0	0	Phage Terminase	N/A
Pfam	UHGV-0096829_42	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0096829_42	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0096829_42	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_43	phrog_12	115.8	3e-34	portal protein	head and packaging
UniRef90	UHGV-0096829_43	UniRef90_A0A2A7B6S8	822.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0096829_43	349161.Dred_2606	278.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0096829_43	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0096829_43	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0096829_43	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0096829_43	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0096829_44	K01358	91.6	1.2e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0096829_44	phrog_94	134.2	1.6e-39	head maturation protease	head and packaging
UniRef90	UHGV-0096829_44	UniRef90_UPI001C10F40E	165.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0096829_44	1121866.AUGK01000006_gene879	140.0	3.28e-38	Clp protease	N/A
Pfam	UHGV-0096829_44	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0096829_44	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0096829_44	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_45	phrog_10	140.7	4.69996e-42	major head protein	head and packaging
UniRef90	UHGV-0096829_45	UniRef90_A0A2A7B712	926.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0096829_45	1235792.C808_00086	459.0	0	Phage capsid family	N/A
Pfam	UHGV-0096829_45	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0096829_45	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0096829_45	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0096829_45	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0096829_45	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_46	phrog_749	56.6	4.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0096829_46	1235792.C808_00087	82.4	4.57e-19	N/A	N/A
PHROG	UHGV-0096829_47	phrog_19734	91.0	1.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0096829_47	349161.Dred_2602	75.1	0.00000000000000114	N/A	N/A
structural_annotation	UHGV-0096829_47	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096829_48	999413.HMPREF1094_02005	73.9	0.0000000000000011	N/A	N/A
structural_annotation	UHGV-0096829_48	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096829_49	UniRef90_A0A1C6FG30	130.0	2.08e-35	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0096829_49	1235798.C817_04589	105.0	1.28e-26	N/A	N/A
structural_annotation	UHGV-0096829_49	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_50	phrog_88	99.4	3.8e-29	major tail protein	tail
UniRef90	UHGV-0096829_50	UniRef90_UPI0018771F27	129.0	3.26e-34	phage tail protein	N/A
eggNOG-mapper	UHGV-0096829_50	349161.Dred_2600	64.7	0.000000000827	N/A	N/A
NCBIFam	UHGV-0096829_50	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0096829_50	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_53	phrog_9959	82.8	2.3e-24	tail length tape measure protein	tail
UniRef90	UHGV-0096829_53	UniRef90_A0A2A7B6K1	1496.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_53	596328.HMPREF0578_1241	153.0	4.19e-35	phage tail tape measure protein	N/A
Pfam	UHGV-0096829_53	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0096829_53	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0096829_53	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0096829_53	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_54	phrog_33	90.5	3.3e-26	distal tail protein Dit	tail
UniRef90	UHGV-0096829_54	UniRef90_A0A173Z1X4	146.0	8.75999e-40	Phage-related protein	N/A
eggNOG-mapper	UHGV-0096829_54	1123315.AUIP01000014_gene1961	95.5	3.81e-21	tail component	N/A
COG	UHGV-0096829_54	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0096829_54	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_55	phrog_1067	196.8	0	minor head protein	head and packaging
UniRef90	UHGV-0096829_55	UniRef90_A0A2A7AM44	694.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0096829_55	1123263.AUKY01000068_gene489	189.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0096829_55	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0096829_55	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0096829_55	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0096829_55	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096829_57	1235799.C818_03019	66.6	0.0000000204	cellulase activity	N/A
COG	UHGV-0096829_57	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0096829_57	PF05096,MF_03141,NF035926,COG3823	N/A	N/A	N/A	N/A
KOfam	UHGV-0096829_58	K07273	167.4	0	acm; lysozyme	N/A
PHROG	UHGV-0096829_58	phrog_291	133.0	2.9e-39	endolysin	lysis
UniRef90	UHGV-0096829_58	UniRef90_UPI001D0EE7D8	300.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0096829_58	748224.HMPREF9436_00154	284.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0096829_58	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0096829_58	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0096829_58	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_59	phrog_1863	75.5	4.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0096829_59	748224.HMPREF9436_00408	106.0	1.91e-29	N/A	N/A
PHROG	UHGV-0096829_60	phrog_263	87.4	1e-25	holin	lysis
UniRef90	UHGV-0096829_60	UniRef90_A0A329UCA4	107.0	5.42e-29	Phage holin	N/A
eggNOG-mapper	UHGV-0096829_60	411483.FAEPRAA2165_00003	102.0	1.76e-27	SPP1 phage holin	N/A
Pfam	UHGV-0096829_60	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0096829_60	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0096829_60	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0096829_61	phrog_918	99.8	1.4e-29	N/A	unknown function
UniRef90	UHGV-0096829_61	UniRef90_UPI000EC62F11	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0096829_61	537007.BLAHAN_05515	138.0	9.02997e-42	N/A	N/A
Pfam	UHGV-0096829_61	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0096829_61	PF19791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096829_63	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096829_64	1235802.C823_04625	55.8	0.0000000669	N/A	N/A
structural_annotation	UHGV-0096829_64	PF13560,NF040522	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096829_67	1033733.CAEK01000007_gene1628	76.6	3.31e-16	N/A	N/A
NCBIFam	UHGV-0096829_67	NF041551.1	N/A	N/A	YlcI/YnfO family protein	N/A
structural_annotation	UHGV-0096829_67	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A