Overview | |
---|---|
UHGV ID | UHGV-0100647 |
vOTU ID | vOTU-105683 |
Representative Genome? | Yes |
Source | GPD |
Original genome ID | uvig_233788 |
Associated BioSample | SAMEA3708631 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | HMM-based |
CheckV completeness | 20.52 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 7 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9562 |
Virus hallmark genes (geNomad) | 6 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 29.28 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 13,629 |
GC content | 54.68% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 28 |
CDS density | 93% |
Average CDS length (bps) | 452.14 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |