UHGV-0100710 (vOTU-137947)

Viral Genome: UHGV-0100710

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0100710
vOTU ID	vOTU-137947
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_212590
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.42 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9725
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.44
Jumbo phage	No

Genome content
Genome length (bp)	23,793
GC content	36.20%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	32
CDS density	95%
Average CDS length (bps)	706.59
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0100710_1	phrog_248	102.4	5.2e-30	transcriptional activator	transcription regulation
UniRef90	UHGV-0100710_1	UniRef90_A0A4S2C6C6	253.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-0100710_1	1104325.M7W_1345	126.0	1.58e-35	N/A	N/A
NCBIFam	UHGV-0100710_1	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0100710_1	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_2	phrog_11535	43.1	0.0000000000034	N/A	unknown function
PHROG	UHGV-0100710_3	phrog_10400	69.0	4.1e-20	N/A	unknown function
PHROG	UHGV-0100710_4	phrog_5859	101.5	3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0100710_4	1158604.I591_00521	162.0	0	N/A	N/A
structural_annotation	UHGV-0100710_4	PF03927,MF_02200,NF009840,COG3471	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_5	phrog_3281	98.0	5.9e-29	endonuclease VII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0100710_5	UniRef90_UPI000CF30667	168.0	0	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0100710_5	565664.EFXG_02665	206.0	0	N/A	N/A
structural_annotation	UHGV-0100710_5	PF09124	N/A	N/A	N/A	N/A
KOfam	UHGV-0100710_6	K07451	51.4	0.000000000000022	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0100710_6	phrog_144	98.8	5.1e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0100710_6	UniRef90_A0A2K8TFR7	267.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0100710_6	565664.EFXG_02664	267.0	0	HNH endonuclease	N/A
Pfam	UHGV-0100710_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0100710_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0100710_6	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_7	phrog_361	161.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0100710_7	UniRef90_A0A2K8TFV2	276.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0100710_7	1158604.I591_00524	289.0	0	N/A	N/A
Pfam	UHGV-0100710_7	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0100710_8	phrog_9	333.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0100710_8	UniRef90_A0A132P9B0	1149.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0100710_8	565664.EFXG_02662	1165.0	0	Phage Terminase	N/A
Pfam	UHGV-0100710_8	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0100710_8	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0100710_8	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0100710_8	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_9	phrog_12	112.3	3.8e-33	portal protein	head and packaging
UniRef90	UHGV-0100710_9	UniRef90_A0A377KN49	759.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0100710_9	565664.EFXG_02661	756.0	0	Phage portal protein	N/A
Pfam	UHGV-0100710_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0100710_9	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0100710_9	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0100710_10	K06904	183.2	0	N/A	N/A
PHROG	UHGV-0100710_10	phrog_80	197.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0100710_10	UniRef90_A0A829A6G8	359.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0100710_10	1158604.I591_00528	368.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0100710_10	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0100710_10	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0100710_10	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0100710_10	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_11	phrog_10	185.4	0	major head protein	head and packaging
UniRef90	UHGV-0100710_11	UniRef90_A0A1V8YHE1	816.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0100710_11	1158604.I591_00529	818.0	0	Phage capsid family	N/A
Pfam	UHGV-0100710_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0100710_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0100710_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0100710_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_12	phrog_4609	146.2	4.62428e-44	N/A	unknown function
UniRef90	UHGV-0100710_12	UniRef90_A0A1S8KT60	173.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0100710_12	1158604.I591_00530	171.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0100710_12	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0100710_12	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
PHROG	UHGV-0100710_13	phrog_4014	154.0	0	head-tail adaptor	connector
UniRef90	UHGV-0100710_13	UniRef90_UPI00195CED45	217.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-0100710_13	1158604.I591_00531	199.0	0	Phage head-tail joining protein	N/A
Pfam	UHGV-0100710_13	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0100710_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0100710_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_14	phrog_78	45.7	0.0000000000012	tail terminator	connector
UniRef90	UHGV-0100710_14	UniRef90_A0A377L6F7	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0100710_14	1158604.I591_00532	172.0	0	N/A	N/A
structural_annotation	UHGV-0100710_14	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_15	phrog_5	57.0	5.8e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0100710_15	UniRef90_A0A829FME6	210.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0100710_15	1158604.I591_00533	225.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0100710_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0100710_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0100710_15	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_16	phrog_11502	157.6	0	tail protein	tail
UniRef90	UHGV-0100710_16	UniRef90_A0A132P9C8	420.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0100710_16	1158604.I591_00534	420.0	0	N/A	N/A
NCBIFam	UHGV-0100710_16	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0100710_16	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_17	phrog_4888	195.8	0	tail assembly chaperone	tail
UniRef90	UHGV-0100710_17	UniRef90_W7D9N8	99.0	7.16e-24	N/A	N/A
eggNOG-mapper	UHGV-0100710_17	1158604.I591_00535	271.0	0	N/A	N/A
structural_annotation	UHGV-0100710_17	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_18	phrog_991	203.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0100710_18	UniRef90_A0A511J194	1157.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0100710_18	1158604.I591_00536	1157.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0100710_18	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0100710_18	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0100710_18	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0100710_18	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_19	phrog_33	81.7	1.6e-23	distal tail protein Dit	tail
UniRef90	UHGV-0100710_19	UniRef90_A0A1V8Y5Z1	487.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0100710_19	1158604.I591_00537	495.0	0	phage tail	N/A
COG	UHGV-0100710_19	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0100710_19	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0100710_20	K19304	135.7	2.5e-40	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0100710_20	phrog_1067	685.9	0	minor head protein	head and packaging
UniRef90	UHGV-0100710_20	UniRef90_UPI000DEB44B9	1729.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0100710_20	1158604.I591_00538	1283.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0100710_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0100710_20	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0100710_20	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
NCBIFam	UHGV-0100710_20	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0100710_20	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0100710_20	PF14594,PF01551,PF18013,TIGR01665,NF040883,COG4926,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-0100710_21	phrog_6042	381.6	0	minor head protein	head and packaging
UniRef90	UHGV-0100710_21	UniRef90_A0A366UEB4	689.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0100710_21	226185.EF_2810	362.0	0	N/A	N/A
Pfam	UHGV-0100710_21	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0100710_21	PF20622	N/A	N/A	Bacterial Ig domain (Big_16)	Big_15
PHROG	UHGV-0100710_22	phrog_9625	173.3	0	N/A	unknown function
UniRef90	UHGV-0100710_22	UniRef90_UPI001F049C55	106.0	2.54e-21	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0100710_22	768486.EHR_09860	311.0	0	N/A	N/A
PHROG	UHGV-0100710_23	phrog_6907	147.4	2.38221e-44	N/A	unknown function
UniRef90	UHGV-0100710_23	UniRef90_UPI001A8F63C0	108.0	1.43e-27	collagen-like protein	N/A
eggNOG-mapper	UHGV-0100710_23	1158607.UAU_01046	126.0	9.43e-36	N/A	N/A
eggNOG-mapper	UHGV-0100710_24	768486.EHR_09860	259.0	0	N/A	N/A
PHROG	UHGV-0100710_25	phrog_1536	64.9	1.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0100710_25	768486.EHR_09865	207.0	0	N/A	N/A
PHROG	UHGV-0100710_26	phrog_1382	42.6	0.0000000000063	N/A	unknown function
eggNOG-mapper	UHGV-0100710_26	1158601.I585_00680	46.2	0.00000179	N/A	N/A
NCBIFam	UHGV-0100710_26	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-0100710_27	phrog_10054	102.2	4.6e-30	N/A	unknown function
UniRef90	UHGV-0100710_27	UniRef90_A0A4S2CDU8	775.0	0	N/A	N/A
eggNOG-mapper	UHGV-0100710_27	945021.TEH_08820	119.0	1.99e-26	InterPro IPR018913 Domain of	N/A
Pfam	UHGV-0100710_27	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0100710_29	phrog_134	49.5	0.000000000000062	N/A	unknown function
UniRef90	UHGV-0100710_29	UniRef90_A0A4S2CBU1	82.4	4.36e-20	XkdX family protein	N/A
eggNOG-mapper	UHGV-0100710_29	861530.ALOZ01000074_gene936	45.1	0.00000559	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0100710_29	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0100710_29	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
UniRef90	UHGV-0100710_31	UniRef90_UPI001A9658FC	155.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0100710_31	903814.ELI_1320	51.6	0.000000216	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0100710_31	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
KOfam	UHGV-0100710_32	K07273	125.9	4.7e-37	acm; lysozyme	N/A
PHROG	UHGV-0100710_32	phrog_3393	205.7	0	endolysin	lysis
UniRef90	UHGV-0100710_32	UniRef90_S4D4Z3	504.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0100710_32	768486.EHR_00550	624.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0100710_32	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0100710_32	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0100710_32	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A