UHGV-0101379 (vOTU-036091)

Viral Genome: UHGV-0101379

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0101379
vOTU ID	vOTU-036091
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_202051
Associated BioSample	SAMEA3449226
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.36 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.88
Jumbo phage	No

Genome content
Genome length (bp)	36,200
GC content	44.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	89%
Average CDS length (bps)	597.28
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0101379_1	316274.Haur_4576	48.1	0.00000529	PFAM restriction endonuclease	N/A
Pfam	UHGV-0101379_1	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0101379_1	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
KOfam	UHGV-0101379_2	K01447	55.5	4e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0101379_2	phrog_20388	217.0	0	endolysin	lysis
UniRef90	UHGV-0101379_2	UniRef90_C6LIN5	442.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
eggNOG-mapper	UHGV-0101379_2	478749.BRYFOR_08515	442.0	0	Cpl-7 lysozyme C-terminal domain protein	N/A
Pfam	UHGV-0101379_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0101379_2	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0101379_2	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0101379_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0101379_3	476272.RUMHYD_01994	99.4	1.72e-21	N/A	N/A
PHROG	UHGV-0101379_4	phrog_6616	524.6	0	tail protein	tail
UniRef90	UHGV-0101379_4	UniRef90_A0A3D3U8S7	354.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0101379_4	33035.JPJF01000043_gene1002	348.0	0	N/A	N/A
structural_annotation	UHGV-0101379_4	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_5	phrog_1194	43.3	0.0000000000059	N/A	unknown function
structural_annotation	UHGV-0101379_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0101379_6	K06240	40.6	0.0000000000017	LAMA3_5; laminin, alpha 3/5	N/A
PHROG	UHGV-0101379_6	phrog_1535	415.5	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0101379_6	411459.RUMOBE_01384	367.0	0	phage tail tape measure protein	N/A
COG	UHGV-0101379_6	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0101379_6	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_7	phrog_706	120.4	1.3e-35	N/A	unknown function
UniRef90	UHGV-0101379_7	UniRef90_A0A1C5M8I2	265.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0101379_7	33035.JPJF01000106_gene3124	183.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0101379_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0101379_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_8	phrog_11299	99.1	4.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0101379_8	33035.JPJF01000106_gene3125	81.3	1.11e-17	N/A	N/A
structural_annotation	UHGV-0101379_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_9	phrog_3099	121.2	8.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-0101379_9	33035.JPJF01000106_gene3126	195.0	0	N/A	N/A
structural_annotation	UHGV-0101379_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_10	phrog_3266	106.5	1.8e-31	tail completion	connector
eggNOG-mapper	UHGV-0101379_10	476272.RUMHYD_01781	149.0	1.41531e-43	N/A	N/A
structural_annotation	UHGV-0101379_10	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_11	phrog_556	73.8	3.7e-22	minor head protein	head and packaging
UniRef90	UHGV-0101379_11	UniRef90_UPI0008B4CFF0	222.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0101379_11	476272.RUMHYD_01780	171.0	0	N/A	N/A
Pfam	UHGV-0101379_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0101379_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_12	phrog_3366	104.9	6.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0101379_12	476272.RUMHYD_01779	162.0	0	N/A	N/A
structural_annotation	UHGV-0101379_12	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_14	phrog_8680	233.0	0	N/A	unknown function
UniRef90	UHGV-0101379_14	UniRef90_UPI0015711ED3	355.0	0	N/A	N/A
eggNOG-mapper	UHGV-0101379_14	411470.RUMGNA_02208	295.0	0	N/A	N/A
Pfam	UHGV-0101379_14	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0101379_14	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_15	phrog_374	219.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0101379_15	UniRef90_A0A0H3N242	183.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0101379_15	645991.Sgly_0324	176.0	0	N/A	N/A
PHROG	UHGV-0101379_17	phrog_1129	79.9	2.1e-23	holin	lysis
UniRef90	UHGV-0101379_17	UniRef90_A0A417JD09	145.0	1.33123e-43	Enolase	N/A
eggNOG-mapper	UHGV-0101379_17	411461.DORFOR_00721	135.0	1.41e-40	N/A	N/A
Pfam	UHGV-0101379_17	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0101379_17	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_18	phrog_918	130.6	3.7e-39	N/A	unknown function
UniRef90	UHGV-0101379_18	UniRef90_UPI0004D82A84	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0101379_18	357809.Cphy_2966	150.0	0	N/A	N/A
Pfam	UHGV-0101379_18	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0101379_18	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_19	phrog_1233	94.7	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0101379_19	33035.JPJF01000106_gene3130	100.0	6.71e-26	N/A	N/A
PHROG	UHGV-0101379_20	phrog_541	91.9	3.5e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0101379_20	476272.RUMHYD_01778	123.0	1.06e-33	N/A	N/A
PHROG	UHGV-0101379_21	phrog_544	152.4	2.8026e-45	major head protein	head and packaging
UniRef90	UHGV-0101379_21	UniRef90_A0A173R8P5	644.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0101379_21	1232453.BAIF02000011_gene3359	397.0	0	N/A	N/A
Pfam	UHGV-0101379_21	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0101379_21	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_22	phrog_194	76.0	6.5e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0101379_22	UniRef90_UPI001D14C9C8	218.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0101379_22	476272.RUMHYD_01775	219.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0101379_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
UniRef90	UHGV-0101379_24	UniRef90_UPI001D15D4B7	87.8	7.61e-22	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0101379_24	476272.RUMHYD_01773	76.6	3.49e-18	Cysteine-rich KTR	N/A
Pfam	UHGV-0101379_24	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0101379_24	PF14205,NF041070	N/A	N/A	N/A	N/A
KOfam	UHGV-0101379_25	K00571	109.8	3.4e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0101379_25	phrog_23224	191.1	0	DNA methyltransferase	other
UniRef90	UHGV-0101379_25	UniRef90_A0A396PTY1	379.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0101379_25	888049.HMPREF8578_0283	346.0	0	DNA methylase	N/A
PADLOC	UHGV-0101379_25	MTase_II_00172	91.4	2e-28	Type II methyltransferase	RM
Pfam	UHGV-0101379_25	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0101379_25	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0101379_25	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_26	phrog_28802	280.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0101379_26	476272.RUMHYD_01772	215.0	0	N/A	N/A
PHROG	UHGV-0101379_27	phrog_20016	181.3	0	N/A	unknown function
UniRef90	UHGV-0101379_27	UniRef90_A0A345BPX4	111.0	7.79e-29	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0101379_27	397290.C810_05214	111.0	1.8e-29	N/A	N/A
structural_annotation	UHGV-0101379_27	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_28	phrog_16490	139.7	0	N/A	unknown function
UniRef90	UHGV-0101379_28	UniRef90_A0A7M1S0F9	65.1	0.00000000704	Spike protein/glycoprotein	N/A
eggNOG-mapper	UHGV-0101379_28	476272.RUMHYD_01770	238.0	0	N/A	N/A
PHROG	UHGV-0101379_29	phrog_21718	188.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0101379_29	476272.RUMHYD_01768	234.0	0	N/A	N/A
eggNOG-mapper	UHGV-0101379_30	397288.C806_00051	54.3	0.00000000356	N/A	N/A
PHROG	UHGV-0101379_31	phrog_16123	63.2	5.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0101379_31	1273103.NM10_00919	52.8	0.00000201	N/A	N/A
PHROG	UHGV-0101379_32	phrog_12389	57.5	2.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0101379_32	1511.CLOST_1250	85.5	8.87e-19	N/A	N/A
UniRef90	UHGV-0101379_33	UniRef90_A0A843HPX3	67.0	0.00000000000057	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0101379_33	1235790.C805_00057	53.1	0.0000000284	N/A	N/A
UniRef90	UHGV-0101379_34	UniRef90_A0A395X7A4	135.0	1.46e-39	CTP synthase	N/A
eggNOG-mapper	UHGV-0101379_34	476272.RUMHYD_01766	161.0	0	N/A	N/A
PHROG	UHGV-0101379_36	phrog_3754	62.2	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0101379_36	476272.RUMHYD_01764	106.0	4.31e-29	N/A	N/A
PHROG	UHGV-0101379_37	phrog_3754	43.4	0.0000000000074	N/A	unknown function
eggNOG-mapper	UHGV-0101379_37	476272.RUMHYD_01764	102.0	2.4e-27	N/A	N/A
PHROG	UHGV-0101379_40	phrog_581	267.7	0	minor head protein	head and packaging
UniRef90	UHGV-0101379_40	UniRef90_A0A412EKN3	512.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0101379_40	33035.JPJF01000106_gene3134	360.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0101379_40	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0101379_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0101379_40	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0101379_41	1444310.JANV01000162_gene1160	198.0	0	N/A	N/A
Pfam	UHGV-0101379_41	PF00657	N/A	N/A	GDSL-like Lipase/Acylhydrolase	Lipase_GDSL
eggNOG-mapper	UHGV-0101379_42	1232452.BAIB02000007_gene1610	50.1	0.00000906	N/A	N/A
PHROG	UHGV-0101379_43	phrog_19695	62.6	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0101379_43	478749.BRYFOR_08558	80.1	3.76e-18	N/A	N/A
structural_annotation	UHGV-0101379_43	PF19714	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_46	phrog_533	279.3	0	portal protein	head and packaging
UniRef90	UHGV-0101379_46	UniRef90_A0A1C6CDM8	599.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0101379_46	33035.JPJF01000106_gene3135	501.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0101379_46	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0101379_47	K06909	388.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0101379_47	phrog_3717	163.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0101379_47	UniRef90_A0A1C6CDG5	533.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0101379_47	33035.JPJF01000106_gene3136	530.0	0	Terminase small subunit	N/A
Pfam	UHGV-0101379_47	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0101379_47	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0101379_47	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0101379_47	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0101379_47	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_48	phrog_314	78.8	8.6e-23	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0101379_48	UniRef90_A0A075KJD6	114.0	1.05e-27	Putative truncated GIY-YIG endonuclease	N/A
eggNOG-mapper	UHGV-0101379_48	1399942.U3PCR9_9CAUD	111.0	1.92e-27	NUMOD3 motif (2 copies)	N/A
Pfam	UHGV-0101379_48	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0101379_48	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-0101379_48	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
KOfam	UHGV-0101379_49	K07474	88.1	2.1e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0101379_49	phrog_51	110.3	1.8e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0101379_49	UniRef90_R6SKL2	205.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0101379_49	318464.IO99_00540	115.0	1.44e-31	Terminase small subunit	N/A
Pfam	UHGV-0101379_49	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0101379_49	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0101379_49	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0101379_51	phrog_359	95.2	6.1e-28	DNA methyltransferase	other
UniRef90	UHGV-0101379_51	UniRef90_UPI0003B4FCBA	97.4	6.36e-25	MT-A70 family methyltransferase	N/A
eggNOG-mapper	UHGV-0101379_51	999413.HMPREF1094_02193	104.0	2.97e-27	Belongs to the MT-A70-like family	N/A
PADLOC	UHGV-0101379_51	MTase_II_00048	82.1	1.5e-23	Type II methyltransferase	RM
Pfam	UHGV-0101379_51	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0101379_51	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
PHROG	UHGV-0101379_52	phrog_33130	152.8	0	N/A	unknown function
UniRef90	UHGV-0101379_52	UniRef90_A0A3B9CD52	73.9	0.00000000000000169	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0101379_52	PF10922,MF_00839	N/A	N/A	N/A	N/A