UHGV-0105518 (vOTU-141194)

Viral Genome: UHGV-0105518

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0105518
vOTU ID	vOTU-141194
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_236892
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	78.62 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.73
Jumbo phage	No

Genome content
Genome length (bp)	31,809
GC content	47.94%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	96%
Average CDS length (bps)	554.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0105518_2	K19479	49.1	6.1e-17	COL10A; collagen type X alpha	N/A
PHROG	UHGV-0105518_2	phrog_5073	48.5	1.6e-16	tail fiber protein	tail
Pfam	UHGV-0105518_2	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0105518_2	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0105518_2	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_4	phrog_6616	96.8	2.5e-29	tail protein	tail
eggNOG-mapper	UHGV-0105518_4	469596.HMPREF9488_01318	176.0	4.35804e-43	N/A	N/A
structural_annotation	UHGV-0105518_4	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_5	phrog_1194	66.9	2.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0105518_5	1211844.CBLM010000023_gene979	50.4	0.00000378	N/A	N/A
Pfam	UHGV-0105518_5	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0105518_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_6	phrog_1535	111.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0105518_6	UniRef90_A0A810PX76	121.0	7.46e-25	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0105518_6	1232443.BAIA02000078_gene18	119.0	1.6e-24	phage tail tape measure protein	N/A
COG	UHGV-0105518_6	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0105518_6	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_7	phrog_706	147.6	6.86636e-44	N/A	unknown function
UniRef90	UHGV-0105518_7	UniRef90_UPI00051C36A4	206.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0105518_7	1449050.JNLE01000003_gene3882	205.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0105518_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0105518_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_8	phrog_11299	111.9	4.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0105518_8	1298920.KI911353_gene2067	76.3	0.000000000000002	N/A	N/A
structural_annotation	UHGV-0105518_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_9	phrog_3099	134.8	5.1e-40	N/A	unknown function
eggNOG-mapper	UHGV-0105518_9	1304866.K413DRAFT_3043	155.0	0	N/A	N/A
structural_annotation	UHGV-0105518_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_10	phrog_3266	98.9	4.2e-29	tail completion	connector
eggNOG-mapper	UHGV-0105518_10	1304866.K413DRAFT_3042	133.0	5.68e-38	N/A	N/A
structural_annotation	UHGV-0105518_10	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_11	phrog_556	91.9	5e-27	minor head protein	head and packaging
UniRef90	UHGV-0105518_11	UniRef90_UPI001B3C5A2B	141.0	3.81e-40	minor capsid protein	N/A
eggNOG-mapper	UHGV-0105518_11	665956.HMPREF1032_03062	97.4	1.02e-23	Minor capsid protein	N/A
Pfam	UHGV-0105518_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0105518_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_12	phrog_3366	44.3	0.00000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0105518_12	1304866.K413DRAFT_3040	57.4	0.00000000659	N/A	N/A
Pfam	UHGV-0105518_12	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0105518_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_13	phrog_541	93.2	2.3e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0105518_13	1304866.K413DRAFT_3039	87.4	1.29e-20	N/A	N/A
PHROG	UHGV-0105518_14	phrog_212	253.2	0	major head protein	head and packaging
UniRef90	UHGV-0105518_14	UniRef90_A0A354MR33	498.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0105518_14	1408437.JNJN01000045_gene592	335.0	0	N/A	N/A
structural_annotation	UHGV-0105518_14	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_15	phrog_194	115.5	5.6e-34	head scaffolding protein	head and packaging
UniRef90	UHGV-0105518_15	UniRef90_UPI0018995066	170.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0105518_15	742765.HMPREF9457_02126	154.0	2.8026e-45	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0105518_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0105518_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_17	phrog_581	242.0	0	minor head protein	head and packaging
UniRef90	UHGV-0105518_17	UniRef90_UPI0006814CA4	452.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0105518_17	693746.OBV_18050	472.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0105518_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0105518_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0105518_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_18	phrog_533	212.4	0	portal protein	head and packaging
UniRef90	UHGV-0105518_18	UniRef90_UPI000680A1DB	483.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0105518_18	693746.OBV_18040	377.0	0	N/A	N/A
Pfam	UHGV-0105518_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0105518_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_20	K06909	126.0	3.9e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0105518_20	phrog_2	151.4	9.80909e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0105518_20	UniRef90_UPI000B8B31AD	507.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0105518_20	1226322.HMPREF1545_00043	484.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0105518_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0105518_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0105518_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0105518_20	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_21	phrog_2412	41.6	0.00000000002	N/A	unknown function
KOfam	UHGV-0105518_24	K03497	60.0	5.4e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0105518_24	phrog_940	299.9	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_24	UniRef90_UPI001C389DC7	398.0	0	N/A	N/A
eggNOG-mapper	UHGV-0105518_24	1232449.BAHV02000018_gene1534	265.0	0	N/A	N/A
PADLOC	UHGV-0105518_24	MTase_II_00015	87.1	2.9e-25	Type II methyltransferase	RM
Pfam	UHGV-0105518_24	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0105518_24	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0105518_24	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0105518_24	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_26	phrog_36	50.1	0.000000000000039	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0105518_26	1095750.HMPREF9970_0179	55.8	0.0000000576	N/A	N/A
Pfam	UHGV-0105518_26	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0105518_26	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_27	K01160	50.4	0.000000000000061	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0105518_27	phrog_34	55.6	0.000000000000001	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_27	UniRef90_A0A498CNH4	145.0	1.6199e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0105518_27	1567011.A0A0A7S133_9VIRU	49.7	0.0000092	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-0105518_27	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0105518_28	PF09871,COG4014	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_30	K01520	113.0	3.1e-33	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0105518_30	phrog_135	100.3	1.8e-29	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_30	UniRef90_UPI00164A78A3	176.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0105518_30	1282887.AUJG01000016_gene1113	135.0	3.28e-38	N/A	N/A
Pfam	UHGV-0105518_30	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-0105518_30	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0105518_30	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_32	phrog_11769	203.4	0	N/A	unknown function
UniRef90	UHGV-0105518_32	UniRef90_R6WQA7	242.0	0	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-0105518_32	536232.CLM_1634	184.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0105518_32	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0105518_32	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0105518_32	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_33	phrog_2113	44.4	0.0000000000023	N/A	unknown function
UniRef90	UHGV-0105518_33	UniRef90_A0A832PDJ8	54.3	0.000000386	DNA replication protein	N/A
eggNOG-mapper	UHGV-0105518_33	871968.DESME_09725	51.6	0.000000724	N/A	N/A
structural_annotation	UHGV-0105518_33	PF21715	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_34	K03111	141.5	9.4994e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0105518_34	phrog_44	140.6	1.10002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_34	UniRef90_R6I6X7	186.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0105518_34	1507.HMPREF0262_00434	149.0	8.40779e-45	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0105518_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0105518_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0105518_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0105518_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0105518_34	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_36	phrog_7566	88.3	5.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0105518_36	1007096.BAGW01000031_gene114	102.0	7.36e-27	N/A	N/A
PHROG	UHGV-0105518_37	phrog_72	60.2	1.8e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_37	UniRef90_A0A8D9PDS2	173.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0105518_37	508419.F8J186_9CAUD	121.0	1.58e-32	N/A	N/A
structural_annotation	UHGV-0105518_37	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_38	phrog_7838	139.0	3.69999e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_38	UniRef90_A0A8D9UGW3	170.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0105518_38	742767.HMPREF9456_02052	164.0	0	N/A	N/A
structural_annotation	UHGV-0105518_38	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_39	phrog_253	129.8	1.8e-38	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105518_39	UniRef90_A0A410PZR1	97.1	1.95e-22	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0105518_39	699218.HMPREF0889_0310	74.7	0.0000000000000114	Siphovirus Gp157	N/A
Pfam	UHGV-0105518_39	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0105518_39	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_44	phrog_6058	69.3	4e-20	N/A	unknown function
UniRef90	UHGV-0105518_44	UniRef90_UPI000D0EB5B4	68.2	0.0000000000000962	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0105518_44	1123288.SOV_2c10360	67.0	0.000000000000044	N/A	N/A
structural_annotation	UHGV-0105518_44	PF12728,TIGR01764	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_45	K07741	138.4	1.3e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-0105518_45	phrog_130	258.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0105518_45	UniRef90_A0A1G5VHS5	283.0	0	Anti-repressor protein	N/A
eggNOG-mapper	UHGV-0105518_45	887325.HMPREF0381_0355	282.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0105518_45	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0105518_45	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0105518_45	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0105518_45	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0105518_52	UniRef90_R6DVV1	83.2	1.15e-19	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0105518_52	246199.CUS_5910	72.0	5.08e-16	N/A	N/A
Pfam	UHGV-0105518_52	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0105518_52	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_53	K01356	167.7	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0105518_53	phrog_4	141.8	5.29971e-42	transcriptional repressor	transcription regulation
UniRef90	UHGV-0105518_53	UniRef90_A0A7X5E0L6	254.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0105518_53	1121423.JONT01000002_gene2372	172.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0105518_53	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
Pfam	UHGV-0105518_53	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0105518_53	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0105518_53	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-0105518_54	phrog_6148	51.0	0.000000000000011	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0105518_54	UniRef90_A0A415L489	93.2	2.43e-21	N/A	N/A
eggNOG-mapper	UHGV-0105518_54	1449050.JNLE01000005_gene4075	69.7	0.000000000000247	N/A	N/A
Pfam	UHGV-0105518_54	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0105518_54	PF12978	N/A	N/A	N/A	DUF3862
structural_annotation	UHGV-0105518_54	PF12978,PF10571,MF_00925,NF008423,COG2913	N/A	N/A	N/A	N/A
KOfam	UHGV-0105518_55	K14059	169.6	0	int; integrase	N/A
PHROG	UHGV-0105518_55	phrog_1	176.4	0	integrase	integration and excision
UniRef90	UHGV-0105518_55	UniRef90_UPI000D0ECE9F	462.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0105518_55	411471.SUBVAR_04379	327.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0105518_55	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0105518_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0105518_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0105518_55	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A