UHGV-0108423 (vOTU-136399)

Viral Genome: UHGV-0108423

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0108423
vOTU ID	vOTU-136399
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_238116
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.53 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.84
Jumbo phage	No

Genome content
Genome length (bp)	28,575
GC content	41.60%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	86%
Average CDS length (bps)	633.69
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0108423_1	UniRef90_R6RDX0	79.7	2.61e-18	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-0108423_2	phrog_253	117.4	1.2e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0108423_2	UniRef90_UPI001030DCF8	182.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0108423_2	411470.RUMGNA_02192	173.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0108423_2	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0108423_2	PF05565	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0108423_5	cluster_17974	60.1	0.00000000000000106	NA	N/A
PHROG	UHGV-0108423_6	phrog_6058	54.5	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0108423_6	742733.HMPREF9469_05094	73.6	8.84e-16	N/A	N/A
PHROG	UHGV-0108423_9	phrog_463	201.7	0	anti-repressor	transcription regulation
UniRef90	UHGV-0108423_9	UniRef90_A0A3A6GZT3	355.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-0108423_9	411490.ANACAC_00813	202.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0108423_9	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0108423_9	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0108423_9	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0108423_9	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0108423_12	K18830	43.4	0.000000000004	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0108423_12	phrog_4	42.5	0.000000000014	transcriptional repressor	transcription regulation
UniRef90	UHGV-0108423_12	UniRef90_A0A2V2D6D5	166.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0108423_12	1235790.C805_00012	103.0	6.11e-27	Helix-turn-helix domain	N/A
Pfam	UHGV-0108423_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0108423_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0108423_12	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_13	phrog_8545	61.5	1.3e-17	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0108423_13	UniRef90_UPI001C0EAFDF	203.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0108423_13	1304866.K413DRAFT_0836	164.0	0	tRNA_anti-like	N/A
Pfam	UHGV-0108423_13	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0108423_13	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-0108423_14	K14059	101.2	1.6e-29	int; integrase	N/A
PHROG	UHGV-0108423_14	phrog_1	125.1	7.2e-37	integrase	integration and excision
UniRef90	UHGV-0108423_14	UniRef90_A0A6L8SXX0	740.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0108423_14	1235792.C808_05256	359.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0108423_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0108423_14	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0108423_14	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_15	phrog_9589	78.4	1e-22	endolysin	lysis
UniRef90	UHGV-0108423_15	UniRef90_A0A6N9LGV5	460.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0108423_15	1123075.AUDP01000020_gene1533	335.0	0	pathogenesis	N/A
Pfam	UHGV-0108423_15	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0108423_15	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0108423_15	PF08230,PF19087	N/A	N/A	N/A	N/A
UniRef90	UHGV-0108423_16	UniRef90_UPI001C0EBDDC	82.4	6.61e-17	pyocin knob domain-containing protein	N/A
PHROG	UHGV-0108423_17	phrog_18444	72.2	5.1e-21	N/A	unknown function
UniRef90	UHGV-0108423_17	UniRef90_UPI00156E9A45	70.5	0.0000000000000113	peptide chain release factor 2	N/A
PHROG	UHGV-0108423_18	phrog_6616	645.4	0	tail protein	tail
UniRef90	UHGV-0108423_18	UniRef90_UPI00156E2BA6	684.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0108423_18	33035.JPJF01000043_gene1002	244.0	0	N/A	N/A
structural_annotation	UHGV-0108423_18	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_19	phrog_1194	85.5	4.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0108423_19	1122918.KB907248_gene4488	52.0	0.000000862	N/A	N/A
structural_annotation	UHGV-0108423_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_20	phrog_1535	524.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0108423_20	UniRef90_A0A173R880	509.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0108423_20	476272.RUMHYD_01785	506.0	0	phage tail tape measure protein	N/A
COG	UHGV-0108423_20	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0108423_20	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_21	phrog_706	129.7	2.2e-38	N/A	unknown function
UniRef90	UHGV-0108423_21	UniRef90_UPI001BAD00AD	206.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0108423_21	411459.RUMOBE_01383	348.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0108423_21	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0108423_21	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_22	phrog_11299	64.5	2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0108423_22	411459.RUMOBE_01382	58.5	0.00000000586	N/A	N/A
structural_annotation	UHGV-0108423_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_23	phrog_3099	132.6	2.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0108423_23	411902.CLOBOL_00129	171.0	0	N/A	N/A
structural_annotation	UHGV-0108423_23	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_24	phrog_3266	94.1	1.1e-27	tail completion	connector
eggNOG-mapper	UHGV-0108423_24	476272.RUMHYD_01781	152.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-0108423_24	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_25	phrog_556	56.1	2.8e-16	minor head protein	head and packaging
UniRef90	UHGV-0108423_25	UniRef90_UPI000E4989EB	318.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0108423_25	476272.RUMHYD_01780	152.0	4.2039e-45	N/A	N/A
Pfam	UHGV-0108423_25	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0108423_25	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_26	phrog_3366	95.9	3.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0108423_26	476272.RUMHYD_01779	155.0	0	N/A	N/A
structural_annotation	UHGV-0108423_26	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_27	phrog_1129	76.3	2.7e-22	holin	lysis
UniRef90	UHGV-0108423_27	UniRef90_A0A395X7B2	172.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0108423_27	411461.DORFOR_00721	116.0	4.34e-33	N/A	N/A
Pfam	UHGV-0108423_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0108423_27	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_28	phrog_1454	99.0	2.5e-29	N/A	unknown function
UniRef90	UHGV-0108423_28	UniRef90_A0A0D1WCB4	102.0	1.86e-27	Phosphomannomutase	N/A
eggNOG-mapper	UHGV-0108423_28	742740.HMPREF9474_04325	114.0	8.26e-33	N/A	N/A
PHROG	UHGV-0108423_29	phrog_541	95.2	4.6e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0108423_29	476272.RUMHYD_01778	112.0	1.71e-29	N/A	N/A
PHROG	UHGV-0108423_30	phrog_544	167.8	0	major head protein	head and packaging
UniRef90	UHGV-0108423_30	UniRef90_A0A395X7A1	736.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0108423_30	1232453.BAIF02000011_gene3359	391.0	0	N/A	N/A
Pfam	UHGV-0108423_30	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0108423_30	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_31	phrog_194	66.1	7.1e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0108423_31	UniRef90_UPI001D14C9C8	188.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0108423_31	476272.RUMHYD_01775	201.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0108423_31	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0108423_32	phrog_28802	224.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0108423_32	476272.RUMHYD_01772	199.0	0	N/A	N/A
PHROG	UHGV-0108423_33	phrog_20016	203.9	0	N/A	unknown function
UniRef90	UHGV-0108423_33	UniRef90_A0A285PT46	168.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0108423_33	397290.C810_05214	188.0	0	N/A	N/A
structural_annotation	UHGV-0108423_33	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0108423_34	phrog_16490	190.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0108423_34	397290.C810_01328	187.0	0	N/A	N/A
PHROG	UHGV-0108423_35	phrog_22984	94.4	7.4e-28	N/A	unknown function
PHROG	UHGV-0108423_36	phrog_21718	134.3	5.19999e-40	N/A	unknown function
eggNOG-mapper	UHGV-0108423_36	476272.RUMHYD_01768	130.0	7.97e-37	N/A	N/A
UniRef90	UHGV-0108423_37	UniRef90_A0A395X7A4	185.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0108423_37	476272.RUMHYD_01766	124.0	1.31e-35	N/A	N/A
PHROG	UHGV-0108423_38	phrog_3754	108.9	3.9e-32	N/A	unknown function
eggNOG-mapper	UHGV-0108423_38	476272.RUMHYD_01764	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-0108423_39	33035.JPJF01000106_gene3134	63.2	0.000000000139	Phage minor capsid protein 2	N/A
COG	UHGV-0108423_39	COG2369	N/A	N/A	N/A	N/A