UHGV-0109205 (vOTU-070236)

Viral Genome: UHGV-0109205

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0109205
vOTU ID	vOTU-070236
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_257303
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	91.27 (High-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.04
Jumbo phage	No

Genome content
Genome length (bp)	38,583
GC content	53.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	91%
Average CDS length (bps)	523.57
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0109205_2	K07741	58.9	2.1e-16	antB; anti-repressor protein	N/A
PHROG	UHGV-0109205_2	phrog_63	65.6	1.2e-18	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0109205_2	UniRef90_A0A6N7TLD1	162.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0109205_2	1051631.F8HGQ0_9CAUD	148.0	6.01998e-42	DNA binding	N/A
Pfam	UHGV-0109205_2	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0109205_2	PF03374,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0109205_3	K07741	45.0	0.0000000000041	antB; anti-repressor protein	N/A
PHROG	UHGV-0109205_3	phrog_6904	61.5	1.3e-17	N/A	unknown function
UniRef90	UHGV-0109205_3	UniRef90_A0A5T0UIT4	64.3	0.00000000000477	AntA domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0109205_3	1230342.CTM_17202	70.9	0.000000000000103	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0109205_3	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0109205_3	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
KOfam	UHGV-0109205_6	K07729	43.8	0.0000000000062	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0109205_6	phrog_8	42.2	0.000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0109205_6	UniRef90_UPI001C009F10	116.0	9.05e-33	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0109205_6	1268072.PSAB_01325	53.1	0.0000000183	Transcriptional regulator	N/A
Pfam	UHGV-0109205_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0109205_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0109205_6	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_7	phrog_8	50.3	0.000000000000056	transcriptional regulator	transcription regulation
UniRef90	UHGV-0109205_7	UniRef90_UPI001C020D87	212.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_7	198094.BA_3829	60.1	0.000000000829	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0109205_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0109205_8	PF21715,NF008122,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_12	phrog_888	65.3	9.6e-35	N/A	unknown function
UniRef90	UHGV-0109205_12	UniRef90_A0A6N7TMA2	447.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_12	1415774.U728_165	86.7	1.58e-17	Short C-terminal domain	N/A
Pfam	UHGV-0109205_12	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-0109205_12	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0109205_12	PF15947,PF14471	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109205_14	UniRef90_A0A6N7TLT0	335.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_14	266265.Bxe_A3948	50.8	0.00000334	Helix-turn-helix domain	N/A
Pfam	UHGV-0109205_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0109205_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0109205_14	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0109205_15	K14059	152.3	5.60519e-45	int; integrase	N/A
PHROG	UHGV-0109205_15	phrog_1	189.4	0	integrase	integration and excision
UniRef90	UHGV-0109205_15	UniRef90_A0A174D176	526.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0109205_15	411471.SUBVAR_05137	255.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0109205_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0109205_15	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0109205_15	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109205_17	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_18	phrog_20016	199.7	0	N/A	unknown function
UniRef90	UHGV-0109205_18	UniRef90_A0A285PT46	209.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0109205_18	1226322.HMPREF1545_00077	183.0	0	N/A	N/A
structural_annotation	UHGV-0109205_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_19	phrog_16490	161.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0109205_19	1408437.JNJN01000043_gene803	118.0	1.11e-29	N/A	N/A
PHROG	UHGV-0109205_20	phrog_22984	79.9	9.7e-24	N/A	unknown function
PHROG	UHGV-0109205_21	phrog_21718	113.7	1.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-0109205_21	397290.C810_05210	97.1	2.37e-23	N/A	N/A
PHROG	UHGV-0109205_22	phrog_3754	100.6	1.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0109205_22	1235790.C805_00054	117.0	2.42e-32	N/A	N/A
eggNOG-mapper	UHGV-0109205_24	1235798.C817_04600	50.1	0.00000215	N/A	N/A
Pfam	UHGV-0109205_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0109205_24	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_26	phrog_5765	62.3	5.8e-18	N/A	unknown function
UniRef90	UHGV-0109205_26	UniRef90_UPI001D0EF465	65.1	0.000000000000634	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0109205_26	748727.CLJU_c31430	57.8	0.0000000000597	N/A	N/A
NCBIFam	UHGV-0109205_26	NF033495.1	N/A	N/A	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0109205_30	411483.FAEPRAA2165_00757	177.0	0	N/A	N/A
structural_annotation	UHGV-0109205_30	PF10651,PF00544,NF041899,COG4677	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_31	phrog_15303	115.6	2.5e-34	N/A	unknown function
Pfam	UHGV-0109205_31	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-0109205_33	K07273	166.5	0	acm; lysozyme	N/A
PHROG	UHGV-0109205_33	phrog_291	118.3	8.4e-35	endolysin	lysis
UniRef90	UHGV-0109205_33	UniRef90_A0A564U0D3	410.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0109205_33	718252.FP2_04890	251.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0109205_33	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0109205_33	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0109205_33	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_34	phrog_1382	49.7	0.000000000000033	N/A	unknown function
eggNOG-mapper	UHGV-0109205_34	411468.CLOSCI_00272	46.6	0.00000231	N/A	N/A
PHROG	UHGV-0109205_36	phrog_9534	46.5	0.00000000000062	head protein	head and packaging
eggNOG-mapper	UHGV-0109205_36	748224.HMPREF9436_00702	122.0	7.7e-30	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0109205_37	phrog_3558	206.4	0	tail protein	tail
eggNOG-mapper	UHGV-0109205_37	610130.Closa_0754	67.8	0.00000000519	N/A	N/A
Pfam	UHGV-0109205_37	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0109205_37	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0109205_37	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109205_38	UniRef90_A0A417QGC1	114.0	2.42e-27	MtfA protein	N/A
eggNOG-mapper	UHGV-0109205_38	1235792.C808_00094	97.4	1.49e-21	phage tail	N/A
COG	UHGV-0109205_38	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0109205_38	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_39	phrog_28775	109.9	2.3e-32	tail length tape measure protein	tail
UniRef90	UHGV-0109205_39	UniRef90_A0A6N7TLD3	1368.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0109205_39	1492737.FEM08_12070	136.0	1.15e-30	tape measure	N/A
Pfam	UHGV-0109205_39	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0109205_39	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0109205_39	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0109205_39	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_42	phrog_885	69.4	4.9e-20	major tail protein	tail
eggNOG-mapper	UHGV-0109205_42	1111121.HMPREF1247_0789	155.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-0109205_42	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109205_43	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_44	phrog_17977	40.9	0.000000000031	N/A	unknown function
UniRef90	UHGV-0109205_44	UniRef90_A0A844DHJ8	119.0	3.28e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0109205_44	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_46	phrog_544	146.8	1.69557e-43	major head protein	head and packaging
UniRef90	UHGV-0109205_46	UniRef90_R0BKA1	433.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_46	476272.RUMHYD_01776	327.0	0	N/A	N/A
structural_annotation	UHGV-0109205_46	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109205_47	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_48	phrog_478	126.4	1.3e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0109205_48	UniRef90_A0A373Q857	168.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_48	1111121.HMPREF1247_0834	94.0	6.35e-23	N/A	N/A
PHROG	UHGV-0109205_51	phrog_5	48.6	0.00000000000021	tail completion or Neck1 protein	connector
UniRef90	UHGV-0109205_51	UniRef90_A0A6N7TNP6	287.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0109205_51	1123309.AQYB01000018_gene814	87.0	7.13e-20	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0109205_51	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0109205_51	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_53	phrog_2468	77.5	1e-22	head morphogenesis	head and packaging
UniRef90	UHGV-0109205_53	UniRef90_A0A6N7TLR7	606.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_53	1504822.CCNO01000013_gene286	110.0	1.17e-23	cell adhesion	N/A
Pfam	UHGV-0109205_53	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0109205_53	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109205_53	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_54	phrog_64	127.3	6.9e-38	portal protein	head and packaging
UniRef90	UHGV-0109205_54	UniRef90_A0A6N7TNT3	839.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0109205_54	642492.Clole_2764	82.8	0.0000000000000413	phage portal protein, SPP1	N/A
Pfam	UHGV-0109205_54	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0109205_54	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0109205_55	K06909	140.3	2.09999e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0109205_55	phrog_10250	174.7	0	N/A	unknown function
UniRef90	UHGV-0109205_55	UniRef90_A0A844D8I4	838.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0109205_55	411490.ANACAC_00783	488.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0109205_55	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0109205_55	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0109205_55	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0109205_55	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0109205_55	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109205_56	UniRef90_UPI0018CC2891	114.0	2.36e-29	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0109205_56	1235790.C805_00037	109.0	2.95e-28	N/A	N/A
structural_annotation	UHGV-0109205_56	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_57	phrog_36	40.0	0.000000000078	transcriptional regulator	transcription regulation
UniRef90	UHGV-0109205_57	UniRef90_A0A6N7TNN9	69.3	0.00000000000639	N/A	N/A
structural_annotation	UHGV-0109205_57	PF07374	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109205_58	UniRef90_A0A845R8R0	103.0	8.39e-26	N/A	N/A
KOfam	UHGV-0109205_59	K01160	61.1	3.7e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0109205_59	phrog_34	61.4	1.9e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0109205_59	UniRef90_A0A6N7TND6	229.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0109205_59	875454.BAEW01000002_gene491	134.0	5.35e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0109205_59	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0109205_59	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0109205_59	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0109205_60	phrog_7711	105.3	5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0109205_60	1304866.K413DRAFT_1204	95.1	2.38e-23	N/A	N/A
PHROG	UHGV-0109205_62	phrog_757	128.2	5.1e-38	DNA methyltransferase	other
UniRef90	UHGV-0109205_62	UniRef90_A0A417JTT5	237.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0109205_62	1095750.HMPREF9970_0173	161.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0109205_62	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0109205_65	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0109205_66	K02086	44.2	0.0000000000033	dnaD; DNA replication protein	N/A
PHROG	UHGV-0109205_66	phrog_186	44.1	0.0000000000043	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0109205_66	UniRef90_A0A564U6B4	97.1	6.07e-25	Replication initiation and membrane attachment	N/A
eggNOG-mapper	UHGV-0109205_66	718252.FP2_01000	63.5	0.0000000000632	N/A	N/A
Pfam	UHGV-0109205_66	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0109205_66	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0109205_66	COG3935	N/A	N/A	DNA replication protein DnaD	N/A