UHGV-0109677 (vOTU-120812)

Viral Genome: UHGV-0109677

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0109677
vOTU ID	vOTU-120812
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_238607
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.55 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	-0.26
Jumbo phage	No

Genome content
Genome length (bp)	20,613
GC content	57.62%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	93%
Average CDS length (bps)	531.58
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0109677_1	UniRef90_UPI001956EF77	159.0	0	stalk domain-containing protein	N/A
eggNOG-mapper	UHGV-0109677_1	1226322.HMPREF1545_01476	124.0	2.9e-33	Copper amine oxidase N-terminal domain	N/A
Pfam	UHGV-0109677_1	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
Pfam	UHGV-0109677_2	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-0109677_2	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
UniRef90	UHGV-0109677_3	UniRef90_A0A3D4XB01	53.5	0.00000144	XRE family transcriptional regulator	N/A
Pfam	UHGV-0109677_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0109677_3	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0109677_3	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0109677_4	K14059	106.5	4.5e-31	int; integrase	N/A
PHROG	UHGV-0109677_4	phrog_1	134.7	9.6e-40	integrase	integration and excision
UniRef90	UHGV-0109677_4	UniRef90_G4L0W3	495.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0109677_4	693746.OBV_43340	495.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0109677_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0109677_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0109677_4	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109677_5	1378168.N510_03079	62.4	0.00000000237	N/A	N/A
PHROG	UHGV-0109677_6	phrog_28802	47.7	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0109677_6	476272.RUMHYD_01772	53.9	0.000000553	N/A	N/A
PHROG	UHGV-0109677_7	phrog_20016	198.8	0	N/A	unknown function
UniRef90	UHGV-0109677_7	UniRef90_A0A285PT46	204.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0109677_7	397290.C810_05214	171.0	0	N/A	N/A
structural_annotation	UHGV-0109677_7	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_8	phrog_16490	138.6	1.80067e-42	N/A	unknown function
eggNOG-mapper	UHGV-0109677_8	1408437.JNJN01000043_gene803	126.0	6.88e-33	N/A	N/A
PHROG	UHGV-0109677_9	phrog_22984	70.7	1.3e-21	N/A	unknown function
PHROG	UHGV-0109677_10	phrog_21718	105.9	3.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0109677_10	397290.C810_05210	74.3	0.0000000000000139	N/A	N/A
PHROG	UHGV-0109677_11	phrog_3754	112.8	2.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0109677_11	1226322.HMPREF1545_00073	167.0	0	N/A	N/A
UniRef90	UHGV-0109677_14	UniRef90_A0A096AZ46	140.0	9.71999e-40	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0109677_14	742738.HMPREF9460_04059	140.0	1.63e-40	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0109677_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0109677_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0109677_14	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109677_15	742738.HMPREF9460_00886	145.0	2.16999e-40	N/A	N/A
KOfam	UHGV-0109677_18	K08640	101.7	1.3e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0109677_18	phrog_894	105.7	6e-31	endolysin	lysis
UniRef90	UHGV-0109677_18	UniRef90_K1TJK4	221.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0109677_18	1235797.C816_04171	199.0	0	Peptidase M15	N/A
Pfam	UHGV-0109677_18	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0109677_18	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109677_18	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_19	phrog_18955	77.5	1.3e-22	N/A	unknown function
UniRef90	UHGV-0109677_19	UniRef90_UPI00164D2830	372.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-0109677_19	1121381.JNIV01000121_gene904	55.8	0.00000244	LysM domain	N/A
Pfam	UHGV-0109677_19	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0109677_19	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0109677_19	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_21	phrog_13256	65.3	6.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0109677_21	1226322.HMPREF1545_00132	72.4	4.53e-16	N/A	N/A
PHROG	UHGV-0109677_22	phrog_1863	65.3	6.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0109677_22	748224.HMPREF9436_01412	98.2	3.86e-26	N/A	N/A
Pfam	UHGV-0109677_23	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0109677_23	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_24	phrog_22773	42.9	0.0000000000086	N/A	unknown function
eggNOG-mapper	UHGV-0109677_24	657322.FPR_21910	60.8	0.000000000678	N/A	N/A
PHROG	UHGV-0109677_26	phrog_18725	73.3	3.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0109677_26	1226322.HMPREF1545_00062	99.8	9.18e-25	N/A	N/A
PHROG	UHGV-0109677_27	phrog_13879	465.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0109677_27	1235797.C816_02659	736.0	0	N/A	N/A
structural_annotation	UHGV-0109677_27	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109677_28	1235797.C816_02660	118.0	9.45e-33	N/A	N/A
structural_annotation	UHGV-0109677_28	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_29	phrog_6900	253.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0109677_29	UniRef90_A0A1E3BXP9	327.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0109677_29	1216932.CM240_0625	333.0	0	tape measure	N/A
COG	UHGV-0109677_29	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0109677_29	PF20155,MF_04138,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_31	phrog_2115	41.7	0.000000000025	tail protein	tail
eggNOG-mapper	UHGV-0109677_31	665950.HMPREF1025_02659	68.6	0.000000000000402	N/A	N/A
structural_annotation	UHGV-0109677_31	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_32	phrog_88	101.1	7.5e-30	major tail protein	tail
UniRef90	UHGV-0109677_32	UniRef90_UPI0018771F27	283.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0109677_32	33035.JPJF01000039_gene278	134.0	1.22e-36	N/A	N/A
NCBIFam	UHGV-0109677_32	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0109677_32	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109677_33	UniRef90_R6UNR2	135.0	1.28e-37	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0109677_33	908340.HMPREF9406_2573	135.0	2.15e-38	N/A	N/A
structural_annotation	UHGV-0109677_33	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109677_34	1235798.C817_04588	80.5	2.77e-18	N/A	N/A
structural_annotation	UHGV-0109677_34	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_35	phrog_19734	137.2	7.09996e-41	N/A	unknown function
UniRef90	UHGV-0109677_35	UniRef90_A0A6I7GNS7	147.0	3.01279e-43	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0109677_35	349161.Dred_2602	95.9	7.97e-24	N/A	N/A
structural_annotation	UHGV-0109677_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0109677_36	phrog_749	73.3	2.7e-21	N/A	unknown function
UniRef90	UHGV-0109677_36	UniRef90_A0A7V7BBS9	78.2	8.29e-17	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0109677_36	1415774.U728_1251	89.4	8.14e-22	N/A	N/A