UHGV-0110366 (vOTU-120041)

Viral Genome: UHGV-0110366

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0110366
vOTU ID	vOTU-120041
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_249737
Associated BioSample	SAMEA3708773
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	72.75 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	12
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	13.58
Jumbo phage	No

Genome content
Genome length (bp)	29,279
GC content	53.45%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	93%
Average CDS length (bps)	535.24
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 72.75)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0110366_1	1226322.HMPREF1545_00079	94.0	1.32e-23	N/A	N/A
structural_annotation	UHGV-0110366_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_3	phrog_20016	172.9	0	N/A	unknown function
UniRef90	UHGV-0110366_3	UniRef90_A0A2Z4QB67	163.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0110366_3	1226322.HMPREF1545_00077	150.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-0110366_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_4	phrog_16490	144.9	8.96831e-44	N/A	unknown function
eggNOG-mapper	UHGV-0110366_4	1408437.JNJN01000043_gene803	151.0	1.67035e-42	N/A	N/A
PHROG	UHGV-0110366_5	phrog_22984	85.1	5.5e-25	N/A	unknown function
PHROG	UHGV-0110366_6	phrog_21718	104.8	8.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0110366_6	397290.C810_05210	70.5	0.000000000000389	N/A	N/A
PHROG	UHGV-0110366_7	phrog_3754	111.9	4.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-0110366_7	1226322.HMPREF1545_00073	165.0	0	N/A	N/A
Pfam	UHGV-0110366_9	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0110366_9	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0110366_10	K08640	92.0	1.1e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0110366_10	phrog_894	92.0	7.6e-27	endolysin	lysis
UniRef90	UHGV-0110366_10	UniRef90_K1TJK4	214.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0110366_10	1235797.C816_04171	188.0	0	Peptidase M15	N/A
Pfam	UHGV-0110366_10	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0110366_10	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110366_10	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_11	phrog_18955	64.2	1.4e-18	N/A	unknown function
UniRef90	UHGV-0110366_11	UniRef90_UPI00164D2830	370.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-0110366_11	696369.KI912183_gene2044	56.2	0.00000172	exopolysaccharide biosynthesis protein	N/A
Pfam	UHGV-0110366_11	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0110366_11	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-0110366_11	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_13	phrog_13256	69.4	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0110366_13	1226322.HMPREF1545_00132	70.5	0.00000000000000272	N/A	N/A
PHROG	UHGV-0110366_14	phrog_4105	75.0	9.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0110366_14	428125.CLOLEP_01431	54.3	0.0000000473	N/A	N/A
PHROG	UHGV-0110366_16	phrog_10993	201.5	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0110366_16	UniRef90_K1UI43	325.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110366_16	1121334.KB911071_gene1970	209.0	0	N/A	N/A
Pfam	UHGV-0110366_16	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0110366_16	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110366_17	PF02973	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_18	phrog_10993	191.3	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0110366_18	UniRef90_K1UI43	326.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110366_18	1121334.KB911071_gene1970	214.0	0	N/A	N/A
Pfam	UHGV-0110366_18	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0110366_18	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110366_19	742733.HMPREF9469_05009	52.4	0.0000073	N/A	N/A
PHROG	UHGV-0110366_20	phrog_13589	153.3	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0110366_20	428125.CLOLEP_01434	206.0	0	N/A	N/A
PHROG	UHGV-0110366_21	phrog_31538	52.7	0.0000000000000093	N/A	unknown function
structural_annotation	UHGV-0110366_22	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_24	phrog_32744	690.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0110366_24	1120998.AUFC01000030_gene2247	228.0	0	N/A	N/A
structural_annotation	UHGV-0110366_24	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_25	phrog_1194	43.5	0.0000000000048	N/A	unknown function
structural_annotation	UHGV-0110366_25	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_26	phrog_6900	265.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0110366_26	UniRef90_R5YSS7	306.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0110366_26	536233.CLO_1577	325.0	0	tape measure	N/A
COG	UHGV-0110366_26	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0110366_26	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_27	phrog_7115	120.4	9.9e-36	N/A	unknown function
UniRef90	UHGV-0110366_27	UniRef90_A0A810PSE6	226.0	0	bPH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0110366_27	1514668.JOOA01000002_gene2950	202.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0110366_27	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0110366_27	PF08000,MF_00437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0110366_29	UniRef90_A0A285PXU7	68.6	0.00000000000332	Consensus disorder prediction	N/A
PHROG	UHGV-0110366_30	phrog_885	86.8	2.1e-25	major tail protein	tail
UniRef90	UHGV-0110366_30	UniRef90_A0A843J9F0	216.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0110366_30	1504822.CCNO01000012_gene492	249.0	0	N/A	N/A
structural_annotation	UHGV-0110366_30	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_31	phrog_17405	42.1	0.000000000014	head protein	head and packaging
structural_annotation	UHGV-0110366_31	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_32	phrog_17977	78.0	8.3e-23	N/A	unknown function
UniRef90	UHGV-0110366_32	UniRef90_UPI00141211AB	91.7	1.35e-21	head-tail adaptor protein	N/A
structural_annotation	UHGV-0110366_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_34	phrog_544	116.6	2.4e-34	major head protein	head and packaging
UniRef90	UHGV-0110366_34	UniRef90_A0A1C6B5R0	349.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0110366_34	476272.RUMHYD_01776	315.0	0	N/A	N/A
structural_annotation	UHGV-0110366_34	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0110366_35	UniRef90_A0A6B9SU02	80.9	0.00000000000000182	Fibronectin autolysin	N/A
structural_annotation	UHGV-0110366_35	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_36	phrog_29211	46.6	0.00000000000052	N/A	unknown function
PHROG	UHGV-0110366_37	phrog_5	71.8	1.3e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-0110366_37	UniRef90_A0A4D7AJK9	195.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0110366_37	386415.NT01CX_2170	110.0	2.4e-29	N/A	N/A
Pfam	UHGV-0110366_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0110366_37	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0110366_37	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_39	phrog_595	157.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0110366_39	UniRef90_A0A810PSD3	530.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0110366_39	1111135.HMPREF1248_0663	165.0	5.21003e-41	cell adhesion	N/A
Pfam	UHGV-0110366_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0110366_39	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
NCBIFam	UHGV-0110366_39	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0110366_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110366_39	PF03496,PF04233,MF_04142,NF040688,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_40	phrog_64	161.1	0	portal protein	head and packaging
UniRef90	UHGV-0110366_40	UniRef90_UPI0018A8A301	593.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0110366_40	1235800.C819_02239	88.2	6.7e-16	phage portal protein, SPP1	N/A
Pfam	UHGV-0110366_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0110366_40	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0110366_41	K06909	380.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0110366_41	phrog_3717	157.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0110366_41	UniRef90_A0A4D7AZ70	723.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0110366_41	411461.DORFOR_01162	449.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0110366_41	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0110366_41	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0110366_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0110366_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0110366_41	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0110366_43	K21527	150.8	7.00649e-45	mom; adenine modification enzyme [EC:2.3.1.-]	N/A
PHROG	UHGV-0110366_43	phrog_1384	155.3	0	Mom-like DNA modification protein	other
UniRef90	UHGV-0110366_43	UniRef90_A0A516MP09	250.0	0	Putative adenine modification enzyme	N/A
eggNOG-mapper	UHGV-0110366_43	619693.HMPREF6745_2515	278.0	0	N/A	N/A
structural_annotation	UHGV-0110366_43	PF16092,MF_02210,NF007025,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-0110366_44	K03497	51.3	0.00000000000003	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0110366_44	phrog_620	143.9	8.99634e-43	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110366_44	UniRef90_A0A3D3Y046	357.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0110366_44	985665.HPL003_12065	115.0	5.69e-28	DNA methylase	N/A
PADLOC	UHGV-0110366_44	MTase_II_00015	88.0	2e-25	Type II methyltransferase	RM
Pfam	UHGV-0110366_44	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0110366_44	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0110366_44	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
KOfam	UHGV-0110366_45	K22299	42.5	0.000000000014	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0110366_45	phrog_8	40.0	0.000000000086	transcriptional regulator	transcription regulation
UniRef90	UHGV-0110366_45	UniRef90_A0A1C6J963	106.0	1.42e-28	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0110366_45	1226322.HMPREF1545_00039	70.5	0.00000000000000361	sequence-specific DNA binding	N/A
Pfam	UHGV-0110366_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0110366_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0110366_46	K02647	56.3	4.6e-16	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-0110366_46	UniRef90_UPI00164DE10C	60.1	0.000000000139	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0110366_46	1301100.HG529387_gene5110	60.1	0.000000000847	Putative sugar diacid recognition	N/A
Pfam	UHGV-0110366_46	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-0110366_46	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0110366_46	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-0110366_49	UniRef90_R6QWY1	107.0	7.13e-28	28	N/A
PHROG	UHGV-0110366_50	phrog_3136	142.9	7.90332e-43	N/A	unknown function
UniRef90	UHGV-0110366_50	UniRef90_A0A3D0HBD2	142.0	8.35e-40	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0110366_50	642492.Clole_1416	55.5	0.000000171	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0110366_50	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0110366_50	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0110366_51	phrog_38832	88.0	5.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0110366_51	665956.HMPREF1032_00143	79.3	2.76e-16	N/A	N/A