UHGV-0110384 (vOTU-096730)

Viral Genome: UHGV-0110384

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0110384
vOTU ID	vOTU-096730
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_267652
Associated BioSample	SAMEA3879593
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.15 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9689
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.11
Jumbo phage	No

Genome content
Genome length (bp)	21,157
GC content	42.97%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	34
CDS density	92%
Average CDS length (bps)	574.32
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0110384_3	phrog_2872	214.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110384_3	UniRef90_A0A412AWF4	409.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0110384_3	1345695.CLSA_c30180	249.0	0	AAA domain	N/A
Pfam	UHGV-0110384_3	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0110384_3	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0110384_14	K22300	65.0	1.6e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0110384_14	phrog_8	53.2	0.0000000000000063	transcriptional regulator	transcription regulation
UniRef90	UHGV-0110384_14	UniRef90_A0A412AV81	249.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0110384_14	903814.ELI_1263	94.7	2.47e-23	Helix-turn-helix domain	N/A
Pfam	UHGV-0110384_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0110384_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0110384_14	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0110384_15	UniRef90_R6N0N7	680.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110384_15	986075.CathTA2_1209	207.0	0	serine threonine protein kinase	N/A
AcrCatalog	UHGV-0110384_15	cluster_71895	192.0	0	NA	N/A
Pfam	UHGV-0110384_15	PF11611	N/A	N/A	N/A	DUF4352
COG	UHGV-0110384_15	COG0515	N/A	N/A	Serine/threonine protein kinase	N/A
PHROG	UHGV-0110384_16	phrog_7115	151.9	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0110384_16	UniRef90_R6N893	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110384_16	1410668.JNKC01000008_gene2722	196.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0110384_16	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0110384_16	PF08000,MF_00437	N/A	N/A	N/A	N/A
KOfam	UHGV-0110384_17	K06400	392.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0110384_17	phrog_95	393.3	0	integrase	integration and excision
UniRef90	UHGV-0110384_17	UniRef90_A0A1C6GN21	1001.0	0	DNA-invertase hin	N/A
eggNOG-mapper	UHGV-0110384_17	883156.HMPREF9282_01201	410.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0110384_17	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0110384_17	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0110384_17	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0110384_17	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0110384_17	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_19	phrog_5763	99.0	4.5e-29	N/A	unknown function
UniRef90	UHGV-0110384_19	UniRef90_A0A377JV05	95.5	1.21e-19	V-SNARE coiled-coil homology domain-containing protein	N/A
eggNOG-mapper	UHGV-0110384_19	1203606.HMPREF1526_00347	90.9	2.06e-18	N/A	N/A
PHROG	UHGV-0110384_20	phrog_1281	126.7	1.2e-37	N/A	unknown function
UniRef90	UHGV-0110384_20	UniRef90_A0A0X8KA51	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110384_20	1000569.HMPREF1040_1612	160.0	0	N/A	N/A
Pfam	UHGV-0110384_20	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0110384_20	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110384_20	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_21	phrog_297	56.0	7.5e-16	holin	lysis
UniRef90	UHGV-0110384_21	UniRef90_A7VT88	183.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0110384_21	428125.CLOLEP_00169	183.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0110384_21	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0110384_21	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0110384_21	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110384_21	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_22	phrog_1863	85.8	2.4e-25	N/A	unknown function
UniRef90	UHGV-0110384_22	UniRef90_A0A2K9NYV1	87.4	4.03e-21	Holin	N/A
eggNOG-mapper	UHGV-0110384_22	428125.CLOLEP_01781	123.0	3.87e-36	N/A	N/A
KOfam	UHGV-0110384_23	K01447	103.6	3e-30	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0110384_23	phrog_3088	251.4	0	amidase	lysis
UniRef90	UHGV-0110384_23	UniRef90_A0A412AXM4	627.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0110384_23	428125.CLOLEP_01782	620.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0110384_23	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0110384_23	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0110384_23	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_24	phrog_7121	278.6	0	tail fiber protein	tail
UniRef90	UHGV-0110384_24	UniRef90_A7VT91	830.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0110384_24	428125.CLOLEP_00172	840.0	0	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-0110384_24	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0110384_24	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0110384_24	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_25	phrog_13289	439.7	0	tail protein	tail
UniRef90	UHGV-0110384_25	UniRef90_A0A412AXS9	1537.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0110384_25	1235798.C817_02568	513.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0110384_25	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0110384_25	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0110384_25	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0110384_25	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_26	phrog_33	75.4	1.3e-21	distal tail protein Dit	tail
UniRef90	UHGV-0110384_26	UniRef90_A0A412AXU0	468.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0110384_26	1235798.C817_02569	177.0	0	tail component	N/A
Pfam	UHGV-0110384_26	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0110384_26	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0110384_26	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_27	phrog_58	215.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0110384_27	UniRef90_UPI000E491C35	117.0	6.79e-24	tape measure protein	N/A
eggNOG-mapper	UHGV-0110384_27	411470.RUMGNA_02228	318.0	0	tape measure	N/A
Pfam	UHGV-0110384_27	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-0110384_27	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-0110384_27	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0110384_27	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0110384_27	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_28	phrog_7423	159.4	0	N/A	unknown function
UniRef90	UHGV-0110384_28	UniRef90_UPI001BB3399C	115.0	6.31e-31	phenylalanine racemase	N/A
eggNOG-mapper	UHGV-0110384_28	1235792.C808_05347	139.0	5.65998e-41	N/A	N/A
PHROG	UHGV-0110384_29	phrog_2115	43.4	0.0000000000079	tail protein	tail
UniRef90	UHGV-0110384_29	UniRef90_R5KJ84	76.6	5.7e-16	BH3520 protein	N/A
eggNOG-mapper	UHGV-0110384_29	1235792.C808_05346	122.0	4.13e-35	N/A	N/A
structural_annotation	UHGV-0110384_29	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_30	phrog_1407	170.6	0	major tail protein	tail
UniRef90	UHGV-0110384_30	UniRef90_A0A412AXG9	505.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0110384_30	1235792.C808_05345	338.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0110384_30	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
Pfam	UHGV-0110384_30	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
NCBIFam	UHGV-0110384_30	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-0110384_30	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0110384_30	PF06199,PF18316,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_31	phrog_176	71.9	8.7e-21	tail terminator	connector
UniRef90	UHGV-0110384_31	UniRef90_A0A412AXH4	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110384_31	1235792.C808_05344	192.0	0	N/A	N/A
Pfam	UHGV-0110384_31	PF16807	N/A	N/A	N/A	DUF5072
structural_annotation	UHGV-0110384_31	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_32	phrog_5	45.4	0.0000000000021	tail completion or Neck1 protein	connector
UniRef90	UHGV-0110384_32	UniRef90_A0A412AXL7	244.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0110384_32	742722.HMPREF9463_00249	149.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-0110384_32	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110384_33	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0110384_34	phrog_132	68.6	9e-20	head-tail adaptor	connector
UniRef90	UHGV-0110384_34	UniRef90_UPI001CF82054	119.0	6.18e-33	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0110384_34	1235792.C808_05341	129.0	1.21e-37	N/A	N/A
Pfam	UHGV-0110384_34	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0110384_34	PF05135	N/A	N/A	N/A	N/A