UHGV-0110751 (vOTU-170771)

Viral Genome: UHGV-0110751

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0110751
vOTU ID	vOTU-170771
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_241492
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.17 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.98
Jumbo phage	No

Genome content
Genome length (bp)	50,218
GC content	39.21%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	83%
Average CDS length (bps)	625.70
Total tRNA genes	5
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0110751_2	phrog_6616	647.0	0	tail protein	tail
UniRef90	UHGV-0110751_2	UniRef90_A0A317UCC3	2630.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0110751_2	476272.RUMHYD_01992	338.0	0	N/A	N/A
Pfam	UHGV-0110751_2	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0110751_2	PF05113,PF18957,PF16407,NF033848,NF011782,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_3	phrog_1194	119.2	2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0110751_3	673837.D2IZU9_9CAUD	83.6	4.28e-19	N/A	N/A
structural_annotation	UHGV-0110751_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_4	phrog_32721	44.3	0.0000000000031	N/A	unknown function
UniRef90	UHGV-0110751_4	UniRef90_UPI00085C0DB7	146.0	3.35e-38	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0110751_4	397288.C806_03994	123.0	3.34e-30	domain, Protein	N/A
Pfam	UHGV-0110751_4	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0110751_4	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110751_4	PF02368,PF08758,PF06832,MF_04116,NF010681,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_5	phrog_2316	223.5	0	N/A	unknown function
UniRef90	UHGV-0110751_5	UniRef90_UPI001570BA1B	372.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110751_5	1504823.CCMM01000012_gene2233	318.0	0	N/A	N/A
Pfam	UHGV-0110751_5	PF16475	N/A	N/A	N/A	DUF5052
structural_annotation	UHGV-0110751_5	PF16475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110751_6	411473.RUMCAL_02525	153.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110751_7	1235793.C809_00537	48.9	0.00000181	N/A	N/A
PHROG	UHGV-0110751_8	phrog_11233	100.4	1.2e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110751_8	UniRef90_A0A412EKX5	170.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0110751_8	1121422.AUMW01000049_gene1257	135.0	5.29e-34	Transcriptional regulator	N/A
COG	UHGV-0110751_8	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0110751_8	PF05584,MF_01909,NF033788,COG1675	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_9	phrog_28918	399.2	0	N/A	unknown function
UniRef90	UHGV-0110751_9	UniRef90_A0A1C5RYZ6	1140.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0110751_9	1298920.KI911353_gene2649	129.0	2.63e-27	tape measure	N/A
COG	UHGV-0110751_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-0110751_10	1298920.KI911353_gene2649	253.0	0	tape measure	N/A
COG	UHGV-0110751_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-0110751_13	476272.RUMHYD_01968	139.0	4.18e-40	N/A	N/A
structural_annotation	UHGV-0110751_13	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_14	phrog_1129	87.0	1.1e-25	holin	lysis
UniRef90	UHGV-0110751_14	UniRef90_UPI001D072DD9	143.0	1.02995e-42	phage holin family protein	N/A
eggNOG-mapper	UHGV-0110751_14	411460.RUMTOR_01325	134.0	1.11e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0110751_14	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0110751_14	PF16079	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110751_15	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110751_16	476272.RUMHYD_01963	99.8	5.19e-24	N/A	N/A
AcrCatalog	UHGV-0110751_16	cluster_24841	78.6	2.32e-20	NA	N/A
structural_annotation	UHGV-0110751_17	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_18	phrog_2310	43.0	0.0000000000049	N/A	unknown function
eggNOG-mapper	UHGV-0110751_19	476272.RUMHYD_00002	77.4	0.00000000000396	N/A	N/A
structural_annotation	UHGV-0110751_19	PF15432	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110751_20	397290.C810_01336	70.5	0.0000000000000482	N/A	N/A
eggNOG-mapper	UHGV-0110751_22	1408437.JNJN01000043_gene802	165.0	0	N/A	N/A
PHROG	UHGV-0110751_23	phrog_16490	224.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0110751_23	658655.HMPREF0988_00917	177.0	0	N/A	N/A
PHROG	UHGV-0110751_25	phrog_21718	64.4	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0110751_25	476272.RUMHYD_01952	85.5	1.07e-18	N/A	N/A
UniRef90	UHGV-0110751_26	UniRef90_A0A412EMQ9	170.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0110751_26	476272.RUMHYD_01951	60.5	0.0000000000516	N/A	N/A
structural_annotation	UHGV-0110751_26	PF04545,MF_00674,NF001073,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_27	phrog_937	51.3	0.00000000000001	hemolysin	other
eggNOG-mapper	UHGV-0110751_28	476272.RUMHYD_01948	119.0	1.5e-33	N/A	N/A
PHROG	UHGV-0110751_29	phrog_29	142.0	4.30058e-42	major head protein	head and packaging
UniRef90	UHGV-0110751_29	UniRef90_A0A0E2H7J5	392.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0110751_29	1232443.BAIA02000078_gene29	290.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0110751_29	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0110751_29	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_30	phrog_909	72.1	6.7e-21	major head protein	head and packaging
UniRef90	UHGV-0110751_30	UniRef90_K1TUL5	63.9	0.0000000000895	N/A	N/A
eggNOG-mapper	UHGV-0110751_30	1497679.EP56_02915	67.4	0.000000000000467	N/A	N/A
structural_annotation	UHGV-0110751_30	PF02924	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110751_31	1298920.KI911353_gene2662	71.2	0.000000000002	N/A	N/A
PHROG	UHGV-0110751_32	phrog_64	186.2	0	portal protein	head and packaging
UniRef90	UHGV-0110751_32	UniRef90_A0A1C5RXC5	978.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0110751_32	1298920.KI911353_gene2663	602.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0110751_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0110751_32	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_33	phrog_36	70.2	3.8e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0110751_33	UniRef90_A0A412EN86	243.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110751_33	97138.C820_00221	76.6	6.84e-16	sigma factor activity	N/A
Pfam	UHGV-0110751_33	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0110751_33	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0110751_33	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_34	phrog_38	175.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0110751_34	UniRef90_A0A8D9PG33	508.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0110751_34	1232453.BAIF02000058_gene1623	477.0	0	TIGRFAM Phage	N/A
COG	UHGV-0110751_34	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110751_34	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0110751_35	K17081	72.6	3e-22	PHB2; prohibitin 2	N/A
PHROG	UHGV-0110751_35	phrog_200	208.9	0	lipoprotein	other
UniRef90	UHGV-0110751_35	UniRef90_A0A373NQU6	508.0	0	Prohibitin family protein	N/A
eggNOG-mapper	UHGV-0110751_35	702450.CUW_0416	221.0	0	COG0330 Membrane protease subunits stomatin prohibitin homologs	N/A
Pfam	UHGV-0110751_35	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0110751_35	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-0110751_35	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_45	phrog_6730	69.8	2.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0110751_45	1136534.J9PTY8_9CAUD	61.2	0.0000000000432	N/A	N/A
structural_annotation	UHGV-0110751_45	PF00684	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_47	phrog_850	390.3	0	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110751_47	UniRef90_A0A3E5EPH1	925.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110751_47	476272.RUMHYD_01913	558.0	0	N/A	N/A
Pfam	UHGV-0110751_47	PF11443	N/A	N/A	N/A	DUF2828
COG	UHGV-0110751_47	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
structural_annotation	UHGV-0110751_47	PF11443,MF_01340,COG2304	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_51	phrog_374	157.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110751_51	UniRef90_A0A3Q9RLP4	155.0	4.08002e-41	Deoxyuridine 5'-triphosphate nucleotidohydrolase family protein	N/A
eggNOG-mapper	UHGV-0110751_51	742767.HMPREF9456_02044	150.0	1.23e-40	N/A	N/A
structural_annotation	UHGV-0110751_51	PF12647	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0110751_52	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110751_53	476272.RUMHYD_01907	100.0	1.83e-23	N/A	N/A
eggNOG-mapper	UHGV-0110751_54	658655.HMPREF0988_00903	45.8	0.00000907	N/A	N/A
UniRef90	UHGV-0110751_56	UniRef90_A0A374NER8	503.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110751_56	1392486.JIAF01000001_gene336	122.0	3.41e-30	N/A	N/A
Pfam	UHGV-0110751_56	PF13497	N/A	N/A	N/A	DUF4121
structural_annotation	UHGV-0110751_56	PF13497	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0110751_57	397290.C810_01347	50.4	0.000000137	N/A	N/A
structural_annotation	UHGV-0110751_57	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-0110751_60	phrog_8680	200.4	0	N/A	unknown function
UniRef90	UHGV-0110751_60	UniRef90_A0A412EMT7	424.0	0	N/A	N/A
eggNOG-mapper	UHGV-0110751_60	476272.RUMHYD_01896	216.0	0	N/A	N/A
Pfam	UHGV-0110751_60	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0110751_60	PF14386	N/A	N/A	N/A	N/A
KOfam	UHGV-0110751_61	K06400	286.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0110751_61	phrog_95	297.2	0	integrase	integration and excision
UniRef90	UHGV-0110751_61	UniRef90_UPI001D084942	697.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0110751_61	1384065.JAGS01000001_gene1134	268.0	0	N/A	N/A
Pfam	UHGV-0110751_61	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0110751_61	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0110751_61	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0110751_61	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0110751_66	K02315	153.7	1.4013e-45	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0110751_66	phrog_50	162.3	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110751_66	UniRef90_A0A3E5ENL1	432.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-0110751_66	742733.HMPREF9469_01844	206.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0110751_66	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-0110751_66	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
PHROG	UHGV-0110751_67	phrog_10469	203.0	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0110751_67	UniRef90_A0A317UCF5	347.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0110751_67	536232.CLM_1634	219.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0110751_67	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0110751_67	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0110751_67	PF09681,TIGR01714,COG3355	N/A	N/A	N/A	N/A