UHGV-0111185 (vOTU-062129)

Viral Genome: UHGV-0111185

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0111185
vOTU ID	vOTU-062129
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_244823
Associated BioSample	SAMEA3708795
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9773
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.47
Jumbo phage	No

Genome content
Genome length (bp)	46,190
GC content	37.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	80
CDS density	89%
Average CDS length (bps)	512.36
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0111185_2	phrog_20016	58.7	8.7e-17	N/A	unknown function
UniRef90	UHGV-0111185_2	UniRef90_A0A316MV88	177.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_2	1226322.HMPREF1545_00077	51.2	0.00000396	N/A	N/A
structural_annotation	UHGV-0111185_2	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111185_3	476272.RUMHYD_01770	73.9	0.000000000000335	N/A	N/A
PHROG	UHGV-0111185_5	phrog_21718	85.3	7.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0111185_5	1235790.C805_00058	105.0	1.96e-26	N/A	N/A
PHROG	UHGV-0111185_6	phrog_419	98.0	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0111185_6	358220.C380_08880	95.5	3.19e-23	Phage protein (N4 Gp49/phage Sf6 gene 66) family	N/A
structural_annotation	UHGV-0111185_6	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_7	phrog_1048	43.8	0.0000000000058	N/A	unknown function
eggNOG-mapper	UHGV-0111185_7	457412.RSAG_01107	90.9	1.67e-21	N/A	N/A
UniRef90	UHGV-0111185_8	UniRef90_A0A417UWY7	202.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0111185_8	476272.RUMHYD_01766	59.3	0.000000000533	N/A	N/A
PHROG	UHGV-0111185_9	phrog_581	263.3	0	minor head protein	head and packaging
UniRef90	UHGV-0111185_9	UniRef90_A0A173TY40	721.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0111185_9	33035.JPJF01000106_gene3134	403.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0111185_9	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0111185_9	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111185_9	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_11	phrog_533	263.0	0	portal protein	head and packaging
UniRef90	UHGV-0111185_11	UniRef90_A0A173TY48	894.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0111185_11	33035.JPJF01000106_gene3135	451.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0111185_11	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0111185_13	K06909	330.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0111185_13	phrog_3717	164.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0111185_13	UniRef90_UPI00156DBE69	839.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0111185_13	33035.JPJF01000106_gene3136	394.0	0	Terminase small subunit	N/A
Pfam	UHGV-0111185_13	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0111185_13	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0111185_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0111185_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0111185_13	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_14	phrog_606	86.4	3.3e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0111185_14	UniRef90_UPI0004BAB6EB	143.0	5.10003e-41	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0111185_14	397290.C810_05185	153.0	2.8026e-45	DNA-packaging protein gp3	N/A
Pfam	UHGV-0111185_14	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0111185_14	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111185_15	478749.BRYFOR_07651	135.0	2.13e-36	N/A	N/A
UniRef90	UHGV-0111185_17	UniRef90_A0A173TX46	152.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_17	397291.C804_01058	62.4	0.00000000000485	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0111185_17	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0111185_17	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_18	phrog_15863	113.4	1.5e-33	N/A	unknown function
UniRef90	UHGV-0111185_18	UniRef90_A0A417UWU3	312.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_18	397288.C806_01234	157.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0111185_18	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0111185_19	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111185_23	PF14285	N/A	N/A	N/A	N/A
KOfam	UHGV-0111185_26	K22300	52.9	0.0000000000000077	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0111185_26	phrog_8	51.5	0.000000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0111185_26	UniRef90_A0A173U128	214.0	0	Transcriptional regulator, y4mF family	N/A
eggNOG-mapper	UHGV-0111185_26	556261.HMPREF0240_03318	58.2	0.0000000105	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0111185_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0111185_26	PF13560,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111185_29	PF19079,TIGR04203	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_39	phrog_31463	107.4	1.4e-31	N/A	unknown function
UniRef90	UHGV-0111185_39	UniRef90_UPI001160B515	107.0	8.75e-27	LemA family protein	N/A
eggNOG-mapper	UHGV-0111185_40	1035196.HMPREF9998_01745	64.7	0.0000000000796	N/A	N/A
KOfam	UHGV-0111185_42	K24213	46.7	0.00000000000036	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0111185_42	phrog_4433	70.5	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0111185_42	886882.PPSC2_p0363	107.0	7.24e-24	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-0111185_42	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0111185_42	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0111185_42	NF007410	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111185_43	UniRef90_UPI001BA881F1	110.0	1.34e-28	transposase	N/A
Pfam	UHGV-0111185_43	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
structural_annotation	UHGV-0111185_43	PF13518,PF13613,NF040595,COG3415	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_44	phrog_1123	58.6	9e-17	N/A	unknown function
UniRef90	UHGV-0111185_44	UniRef90_A0A6N9P096	56.2	0.0000000495	DNA gyrase	N/A
eggNOG-mapper	UHGV-0111185_44	1308863.U5J9F3_9CAUD	53.5	0.000000128	N/A	N/A
structural_annotation	UHGV-0111185_44	PF03551,MF_01804,TIGR03433,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_45	phrog_270	81.6	1.4e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111185_45	UniRef90_A0A416S3A2	117.0	3.74e-28	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_45	742733.HMPREF9469_01845	181.0	0	N/A	N/A
structural_annotation	UHGV-0111185_45	PF10771,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0111185_46	K01160	48.8	0.00000000000019	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0111185_46	phrog_1682	64.6	1.9e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111185_46	UniRef90_A0A417V5H0	262.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0111185_46	1158604.I591_01786	103.0	8.79e-27	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0111185_46	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0111185_46	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0111185_46	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_47	phrog_7566	86.1	2.8e-25	N/A	unknown function
UniRef90	UHGV-0111185_47	UniRef90_A0A417V5I7	184.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0111185_47	1304866.K413DRAFT_1198	78.6	5.63e-18	N/A	N/A
PHROG	UHGV-0111185_48	phrog_72	48.4	0.00000000000011	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111185_48	UniRef90_A0A285PU94	119.0	1.95e-30	Recombinase NinB	N/A
eggNOG-mapper	UHGV-0111185_48	411490.ANACAC_00804	237.0	0	N/A	N/A
structural_annotation	UHGV-0111185_48	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_49	phrog_155	134.5	7.9e-40	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111185_49	UniRef90_A0A417V5L9	385.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0111185_49	929506.CbC4_1193	159.0	0	ERF superfamily	N/A
Pfam	UHGV-0111185_49	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0111185_49	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_53	phrog_36464	77.8	1.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0111185_53	1235798.C817_05488	66.2	0.000000000000183	N/A	N/A
structural_annotation	UHGV-0111185_53	PF09035	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0111185_54	cluster_17974	99.8	5.28e-31	NA	N/A
PHROG	UHGV-0111185_57	phrog_8	51.1	0.000000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0111185_57	UniRef90_UPI00156EC996	91.7	3.11e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_57	1201292.DR75_1541	65.1	0.000000000000244	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0111185_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0111185_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0111185_57	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0111185_58	K22300	62.6	1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0111185_58	phrog_8	80.0	4.4e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0111185_58	UniRef90_UPI001570EBDA	164.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0111185_58	1235802.C823_04750	85.5	1.49e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0111185_58	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0111185_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0111185_58	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_59	phrog_87	67.8	1.3e-19	metallo-protease	other
UniRef90	UHGV-0111185_59	UniRef90_A0A417V5H7	285.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0111185_59	1235802.C823_04751	110.0	7.54e-29	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0111185_59	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0111185_59	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0111185_59	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_60	phrog_10059	47.5	0.00000000000015	N/A	unknown function
UniRef90	UHGV-0111185_60	UniRef90_UPI0011CB643E	200.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_60	445971.ANASTE_01207	157.0	7.84727e-44	Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0111185_60	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-0111185_60	PF02368,NF005261,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-0111185_61	K14059	153.9	1.4013e-45	int; integrase	N/A
PHROG	UHGV-0111185_61	phrog_1	154.1	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-0111185_61	UniRef90_A0A173TZS3	740.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0111185_61	1235798.C817_05483	409.0	0	Phage integrase family	N/A
Pfam	UHGV-0111185_61	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0111185_61	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0111185_61	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_62	phrog_9589	106.2	6.7e-32	endolysin	lysis
UniRef90	UHGV-0111185_62	UniRef90_A0A173TVL9	504.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0111185_62	1123075.AUDP01000020_gene1533	226.0	0	pathogenesis	N/A
Pfam	UHGV-0111185_62	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0111185_62	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0111185_62	PF01471,PF06940,TIGR02594,NF038080,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_63	phrog_962	56.4	5.5e-16	holin	lysis
UniRef90	UHGV-0111185_63	UniRef90_A0A173TVM5	162.0	0	Small integral membrane protein	N/A
eggNOG-mapper	UHGV-0111185_63	887929.HMP0721_1251	85.1	1.74e-20	Bacteriophage holin	N/A
Pfam	UHGV-0111185_63	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0111185_63	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0111185_63	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_66	phrog_18444	92.8	1.9e-27	N/A	unknown function
PHROG	UHGV-0111185_67	phrog_6616	528.0	0	tail protein	tail
UniRef90	UHGV-0111185_67	UniRef90_A0A173TV73	2216.0	0	Collagen triple helix repeat (20 copies)	N/A
eggNOG-mapper	UHGV-0111185_67	33035.JPJF01000043_gene1002	288.0	0	N/A	N/A
structural_annotation	UHGV-0111185_67	PF05113,PF03921,PF13884,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_68	phrog_1194	43.6	0.0000000000043	N/A	unknown function
structural_annotation	UHGV-0111185_68	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_69	phrog_1535	276.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0111185_69	UniRef90_A0A173TXH9	1474.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0111185_69	411459.RUMOBE_01384	273.0	0	phage tail tape measure protein	N/A
COG	UHGV-0111185_69	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0111185_69	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_70	phrog_706	135.6	3.09999e-40	N/A	unknown function
UniRef90	UHGV-0111185_70	UniRef90_A0A173TZF2	383.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0111185_70	411459.RUMOBE_01383	203.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0111185_70	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0111185_70	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_71	phrog_11299	75.1	9.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0111185_71	411459.RUMOBE_01382	75.1	0.00000000000000219	N/A	N/A
structural_annotation	UHGV-0111185_71	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_72	phrog_3099	125.9	2.6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0111185_72	411902.CLOBOL_00129	156.0	0	N/A	N/A
structural_annotation	UHGV-0111185_72	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_73	phrog_3266	80.7	1.6e-23	tail completion	connector
eggNOG-mapper	UHGV-0111185_73	476272.RUMHYD_01781	190.0	0	N/A	N/A
structural_annotation	UHGV-0111185_73	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_74	phrog_556	65.7	4.4e-19	minor head protein	head and packaging
UniRef90	UHGV-0111185_74	UniRef90_UPI000E4989EB	161.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0111185_74	476272.RUMHYD_01780	174.0	0	N/A	N/A
Pfam	UHGV-0111185_74	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0111185_74	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_75	phrog_3366	84.5	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0111185_75	476272.RUMHYD_01779	122.0	1.94e-33	N/A	N/A
structural_annotation	UHGV-0111185_75	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_76	phrog_541	89.9	2.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0111185_76	1235790.C805_00076	171.0	0	N/A	N/A
PHROG	UHGV-0111185_77	phrog_247	226.7	0	major head protein	head and packaging
UniRef90	UHGV-0111185_77	UniRef90_UPI001BA5448B	295.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0111185_77	33035.JPJF01000106_gene3132	548.0	0	N/A	N/A
structural_annotation	UHGV-0111185_77	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0111185_78	phrog_194	42.5	0.0000000000096	head scaffolding protein	head and packaging
UniRef90	UHGV-0111185_78	UniRef90_UPI001C0EBA51	158.0	5.60519e-45	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0111185_78	742765.HMPREF9457_02126	73.2	0.000000000000241	COG NOG36366 non supervised orthologous group	N/A