UHGV-0113100 (vOTU-101902)

Viral Genome: UHGV-0113100

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0113100
vOTU ID	vOTU-101902
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_288740
Associated BioSample	SAMEA4378259
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.21 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.89
Jumbo phage	No

Genome content
Genome length (bp)	25,086
GC content	46.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	93%
Average CDS length (bps)	649.83
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
AcrCatalog	UHGV-0113100_1	cluster_11486	41.2	0.000000233	NA	N/A
UniRef90	UHGV-0113100_2	UniRef90_UPI00082E087A	148.0	7.00649e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0113100_2	411470.RUMGNA_03786	67.0	0.00000000000114	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0113100_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0113100_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0113100_2	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_3	phrog_374	45.4	0.0000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0113100_3	742738.HMPREF9460_04058	89.7	2.73e-18	N/A	N/A
KOfam	UHGV-0113100_4	K11062	84.2	1.2e-24	entD; probable enterotoxin D	N/A
PHROG	UHGV-0113100_4	phrog_3088	162.7	0	amidase	lysis
UniRef90	UHGV-0113100_4	UniRef90_A0A417U0P9	383.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0113100_4	1151292.QEW_0991	192.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0113100_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0113100_4	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0113100_4	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0113100_4	PF01510,PF19127,MF_04111,NF008758,TIGR04035,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0113100_5	1304866.K413DRAFT_4731	79.0	1.48e-18	N/A	N/A
eggNOG-mapper	UHGV-0113100_7	1298920.KI911353_gene541	53.9	0.00000974	ATPase involved in DNA repair	N/A
COG	UHGV-0113100_7	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0113100_7	PF07675,NF038128	N/A	N/A	N/A	N/A
COG	UHGV-0113100_8	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-0113100_9	1304866.K413DRAFT_0769	85.1	7.1e-19	N/A	N/A
PHROG	UHGV-0113100_10	phrog_18725	53.3	0.0000000000000054	N/A	unknown function
eggNOG-mapper	UHGV-0113100_10	411902.CLOBOL_00123	126.0	2.97e-35	N/A	N/A
PHROG	UHGV-0113100_11	phrog_32744	180.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0113100_11	411902.CLOBOL_00124	474.0	0	N/A	N/A
structural_annotation	UHGV-0113100_11	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_12	phrog_1194	51.9	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0113100_12	411902.CLOBOL_00125	127.0	7.29e-36	N/A	N/A
structural_annotation	UHGV-0113100_12	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_13	phrog_37543	720.0	0	N/A	unknown function
UniRef90	UHGV-0113100_13	UniRef90_UPI001DBC5439	299.0	0	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-0113100_13	1298920.KI911353_gene2068	198.0	0	domain protein	N/A
COG	UHGV-0113100_13	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_14	phrog_706	130.5	1.1e-38	N/A	unknown function
UniRef90	UHGV-0113100_14	UniRef90_A0A1I0K8S4	197.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0113100_14	411902.CLOBOL_00127	195.0	0	N/A	N/A
Pfam	UHGV-0113100_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0113100_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_15	phrog_11299	133.3	1.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0113100_15	411459.RUMOBE_01382	75.1	0.00000000000000386	N/A	N/A
PHROG	UHGV-0113100_16	phrog_3099	127.2	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0113100_16	1120746.CCNL01000014_gene2102	119.0	1.18e-31	N/A	N/A
structural_annotation	UHGV-0113100_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_17	phrog_3266	120.3	9.5e-36	tail completion	connector
eggNOG-mapper	UHGV-0113100_17	476272.RUMHYD_01781	144.0	1.79002e-41	N/A	N/A
structural_annotation	UHGV-0113100_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_18	phrog_556	71.7	4.1e-22	minor head protein	head and packaging
UniRef90	UHGV-0113100_18	UniRef90_UPI0008B4CFF0	226.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0113100_18	476272.RUMHYD_01780	164.0	0	N/A	N/A
Pfam	UHGV-0113100_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0113100_18	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_19	phrog_3366	110.3	1.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-0113100_19	476272.RUMHYD_01779	145.0	1.46015e-42	N/A	N/A
structural_annotation	UHGV-0113100_19	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_22	phrog_8680	242.3	0	N/A	unknown function
UniRef90	UHGV-0113100_22	UniRef90_UPI0015711ED3	394.0	0	N/A	N/A
eggNOG-mapper	UHGV-0113100_22	411470.RUMGNA_02208	320.0	0	N/A	N/A
Pfam	UHGV-0113100_22	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0113100_22	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_23	phrog_18218	147.0	4.2039e-44	N/A	unknown function
UniRef90	UHGV-0113100_23	UniRef90_A0A8D9PGR5	153.0	0	Holin	N/A
eggNOG-mapper	UHGV-0113100_23	411902.CLOBOL_03424	75.9	1.95e-16	N/A	N/A
structural_annotation	UHGV-0113100_23	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_24	phrog_541	101.4	3.9e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0113100_24	476272.RUMHYD_01778	119.0	3.53e-32	N/A	N/A
PHROG	UHGV-0113100_25	phrog_544	153.7	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-0113100_25	UniRef90_A0A173R8P5	649.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0113100_25	1232453.BAIF02000011_gene3359	400.0	0	N/A	N/A
Pfam	UHGV-0113100_25	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0113100_25	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_26	phrog_194	69.7	6e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0113100_26	UniRef90_UPI001D14C9C8	231.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0113100_26	476272.RUMHYD_01775	204.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0113100_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0113100_27	phrog_28802	216.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0113100_27	476272.RUMHYD_01772	165.0	0	N/A	N/A
PHROG	UHGV-0113100_28	phrog_20016	210.4	0	N/A	unknown function
UniRef90	UHGV-0113100_28	UniRef90_A0A345BPX4	110.0	1.4e-28	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0113100_28	397290.C810_05214	100.0	1.95e-25	N/A	N/A
structural_annotation	UHGV-0113100_28	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_29	phrog_16490	248.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0113100_29	476272.RUMHYD_01770	265.0	0	N/A	N/A
PHROG	UHGV-0113100_30	phrog_22984	126.3	8.4e-38	N/A	unknown function
PHROG	UHGV-0113100_31	phrog_21718	236.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0113100_31	476272.RUMHYD_01768	226.0	0	N/A	N/A
UniRef90	UHGV-0113100_32	UniRef90_A0A843HPX3	75.1	1.67e-16	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0113100_32	1235790.C805_00057	57.0	0.000000000413	N/A	N/A
structural_annotation	UHGV-0113100_32	PF13404,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0113100_33	UniRef90_A0A395X7A4	138.0	1.11e-40	CTP synthase	N/A
eggNOG-mapper	UHGV-0113100_33	476272.RUMHYD_01766	147.0	4.2039e-45	N/A	N/A
PHROG	UHGV-0113100_34	phrog_3754	112.0	4.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0113100_34	476272.RUMHYD_01764	213.0	0	N/A	N/A
PHROG	UHGV-0113100_35	phrog_581	264.5	0	minor head protein	head and packaging
UniRef90	UHGV-0113100_35	UniRef90_A0A1C6CDG2	611.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0113100_35	33035.JPJF01000106_gene3134	454.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0113100_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0113100_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0113100_35	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0113100_36	phrog_16164	166.2	0	N/A	unknown function
UniRef90	UHGV-0113100_36	UniRef90_UPI00085CAFDC	136.0	8.94e-30	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0113100_36	476272.RUMHYD_00002	109.0	1.16e-21	N/A	N/A
structural_annotation	UHGV-0113100_36	PF10651,NF032891	N/A	N/A	N/A	N/A