UHGV-0114264 (vOTU-068924)

Viral Genome: UHGV-0114264

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0114264
vOTU ID	vOTU-068924
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_306976
Associated BioSample	SAMEA103958151
Viral genome confidence	Confident

Quality assessment
CheckV method	Provirus
CheckV completeness	99.9 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	26
CheckV host markers	6
Recoded stop codon	No

Viral Content
geNomad score	0.9755
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	67.03
Jumbo phage	No

Genome content
Genome length (bp)	32,139
GC content	38.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	94%
Average CDS length (bps)	627.75
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0114264_1	UniRef90_UPI001C386214	123.0	1.08e-35	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0114264_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0114264_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0114264_1	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0114264_3	K07741	174.9	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0114264_3	phrog_63	160.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0114264_3	UniRef90_UPI00067F3EAD	335.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0114264_3	1499683.CCFF01000017_gene2614	292.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0114264_3	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0114264_3	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0114264_3	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0114264_3	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114264_4	UniRef90_A0A416DT94	91.7	1.74e-22	DNA-binding protein	N/A
structural_annotation	UHGV-0114264_4	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_8	phrog_434	162.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114264_8	UniRef90_A0A6N9L4Y3	445.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0114264_8	888055.HMPREF9015_01894	128.0	4.88e-34	YqaJ viral recombinase family	N/A
Pfam	UHGV-0114264_8	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0114264_8	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0114264_8	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0114264_8	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_9	phrog_674	82.5	1.8e-24	N/A	unknown function
UniRef90	UHGV-0114264_9	UniRef90_UPI001C383633	737.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114264_9	1234679.BN424_3317	70.1	0.00000000022	N/A	N/A
Pfam	UHGV-0114264_9	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0114264_9	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0114264_10	K07455	212.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0114264_10	phrog_148	226.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114264_10	UniRef90_A0A6N9L4X4	572.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0114264_10	1095750.HMPREF9970_1675	364.0	0	RecT family	N/A
Pfam	UHGV-0114264_10	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0114264_10	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0114264_10	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0114264_10	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_11	phrog_2514	63.5	3.6e-18	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114264_11	UniRef90_UPI001C395B09	276.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0114264_11	1140002.I570_01458	62.4	0.0000000165	DnaD domain protein	N/A
COG	UHGV-0114264_11	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0114264_11	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_16	phrog_2245	62.4	8.1e-18	nucleoside triphosphate pyrophosphohydrolase	other
Pfam	UHGV-0114264_16	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-0114264_16	NF001613,COG1694	N/A	N/A	N/A	N/A
KOfam	UHGV-0114264_19	K03111	144.0	1.60028e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0114264_19	phrog_44	151.9	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114264_19	UniRef90_A0A6N9L4V1	279.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0114264_19	1121333.JMLH01000005_gene483	157.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0114264_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0114264_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0114264_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0114264_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0114264_19	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_20	phrog_190	126.2	2.3e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114264_20	UniRef90_A0A6N9L4W3	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114264_20	445974.CLORAM_02947	108.0	4.97e-29	N/A	N/A
Pfam	UHGV-0114264_20	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0114264_20	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_22	phrog_36	58.1	2e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0114264_22	411461.DORFOR_00754	51.2	0.0000027	sigma factor activity	N/A
Pfam	UHGV-0114264_22	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0114264_22	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0114264_22	PF08281,MF_00674,NF007227,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0114264_23	K07474	104.5	2.1e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0114264_23	phrog_51	120.0	1.9e-35	terminase small subunit	head and packaging
UniRef90	UHGV-0114264_23	UniRef90_A0A6N9L4V4	260.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0114264_23	1504823.CCMM01000008_gene1049	192.0	0	DNA packaging	N/A
Pfam	UHGV-0114264_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0114264_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0114264_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0114264_24	K06909	361.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0114264_24	phrog_3717	163.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0114264_24	UniRef90_A0A6N9L4W9	797.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0114264_24	445974.CLORAM_02936	736.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0114264_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0114264_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0114264_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0114264_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0114264_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_25	phrog_64	392.2	0	portal protein	head and packaging
UniRef90	UHGV-0114264_25	UniRef90_A0A6N9L3D6	899.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0114264_25	445974.CLORAM_02935	479.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0114264_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0114264_25	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0114264_25	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_26	phrog_115	340.9	0	minor head protein	head and packaging
UniRef90	UHGV-0114264_26	UniRef90_A0A6N9L4X5	998.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0114264_26	1211844.CBLM010000016_gene1495	403.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0114264_26	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0114264_26	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0114264_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114264_26	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_28	phrog_3675	114.6	3.7e-34	N/A	unknown function
UniRef90	UHGV-0114264_28	UniRef90_A0A0E4H649	119.0	8.87e-33	YjcQ protein	N/A
eggNOG-mapper	UHGV-0114264_28	1120978.KB894082_gene1061	142.0	2.1594e-42	YjcQ protein	N/A
Pfam	UHGV-0114264_28	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0114264_28	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_29	phrog_172	156.8	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0114264_29	UniRef90_A0A6N9L4V5	293.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114264_29	445974.CLORAM_02931	125.0	2.42e-33	N/A	N/A
Pfam	UHGV-0114264_29	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0114264_29	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_30	phrog_422	298.8	0	major head protein	head and packaging
UniRef90	UHGV-0114264_30	UniRef90_A0A2H4JCM6	300.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0114264_30	1211844.CBLM010000016_gene1491	308.0	0	N/A	N/A
structural_annotation	UHGV-0114264_30	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_31	phrog_2724	60.3	3.8e-17	N/A	unknown function
UniRef90	UHGV-0114264_31	UniRef90_A0A6N9L4P9	159.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-0114264_31	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-0114264_31	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-0114264_31	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_32	phrog_132	42.1	0.000000000013	head-tail adaptor	connector
UniRef90	UHGV-0114264_32	UniRef90_UPI001C101B39	54.3	0.000000262	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0114264_32	1235800.C819_00483	56.6	0.00000000811	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0114264_32	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0114264_32	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_33	phrog_2168	90.3	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0114264_33	1280689.AUJC01000003_gene969	77.4	5.05e-17	N/A	N/A
structural_annotation	UHGV-0114264_33	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_34	phrog_5	72.6	6.9e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-0114264_34	UniRef90_A0A6N9L3B6	343.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0114264_34	742733.HMPREF9469_01819	155.0	1.4013e-45	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0114264_34	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0114264_34	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0114264_34	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_35	phrog_78	56.8	4.5e-16	tail terminator	connector
eggNOG-mapper	UHGV-0114264_35	1504823.CCMM01000008_gene1036	137.0	2.04e-40	N/A	N/A
structural_annotation	UHGV-0114264_35	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_36	phrog_158	69.9	5e-20	major tail protein	tail
UniRef90	UHGV-0114264_36	UniRef90_A0A6N9L2K6	265.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0114264_36	742733.HMPREF9469_01817	177.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0114264_36	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0114264_36	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_37	phrog_183	58.2	1.6e-16	tail chaperone protein	tail
UniRef90	UHGV-0114264_37	UniRef90_UPI0011C9B36A	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114264_37	445974.CLORAM_02923	116.0	9.38e-32	N/A	N/A
Pfam	UHGV-0114264_37	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0114264_37	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_38	phrog_1535	320.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0114264_38	UniRef90_A0A6N9L4U2	1450.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0114264_38	650150.ERH_0621	342.0	0	tape measure	N/A
Pfam	UHGV-0114264_38	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0114264_38	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0114264_38	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0114264_39	phrog_1194	86.2	3.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0114264_39	1504823.CCMM01000008_gene1031	188.0	0	N/A	N/A
Pfam	UHGV-0114264_39	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0114264_39	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_40	phrog_15074	59.4	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0114264_40	445974.CLORAM_02919	492.0	0	cellulase activity	N/A
COG	UHGV-0114264_40	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0114264_40	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_41	phrog_30133	114.6	8.6e-34	virion structural protein	head and packaging
UniRef90	UHGV-0114264_41	UniRef90_I7ARM6	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114264_41	1504823.CCMM01000008_gene1029	316.0	0	N/A	N/A
structural_annotation	UHGV-0114264_41	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_42	phrog_18110	41.6	0.000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0114264_42	411465.PEPMIC_00746	69.7	0.0000000000938	Prophage endopeptidase tail	N/A
COG	UHGV-0114264_42	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0114264_43	phrog_372	210.5	0	tail protein	tail
UniRef90	UHGV-0114264_43	UniRef90_UPI0006C32325	1087.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114264_43	1211844.CBLM010000016_gene1479	196.0	0	N/A	N/A
Pfam	UHGV-0114264_43	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0114264_43	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_44	phrog_199	62.0	7.1e-18	holin	lysis
UniRef90	UHGV-0114264_44	UniRef90_E2NU60	286.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0114264_44	742723.HMPREF9477_00889	194.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0114264_44	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0114264_44	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0114264_44	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0114264_44	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_45	phrog_918	116.7	7.6e-35	N/A	unknown function
UniRef90	UHGV-0114264_45	UniRef90_UPI00164AB9AF	122.0	1.03e-34	N/A	N/A
eggNOG-mapper	UHGV-0114264_45	1504823.CCMM01000008_gene1021	117.0	2.57e-33	N/A	N/A
Pfam	UHGV-0114264_45	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0114264_45	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_46	phrog_355	50.0	0.000000000000047	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114264_46	UniRef90_UPI0018A09237	116.0	7.17e-32	N/A	N/A
eggNOG-mapper	UHGV-0114264_46	397290.C810_05229	114.0	8.03e-32	N/A	N/A
Pfam	UHGV-0114264_46	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0114264_46	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0114264_47	phrog_774	58.5	1.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0114264_47	397290.C810_05225	79.3	2.85e-18	N/A	N/A
KOfam	UHGV-0114264_48	K01448	124.0	1.6e-36	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0114264_48	phrog_435	192.9	0	endolysin	lysis
UniRef90	UHGV-0114264_48	UniRef90_UPI001EE924D3	440.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0114264_48	552396.HMPREF0863_00263	196.0	0	hmm pf01520	N/A
Pfam	UHGV-0114264_48	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0114264_48	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0114264_48	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A