UHGV-0114520 (vOTU-066127)

Viral Genome: UHGV-0114520

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0114520
vOTU ID	vOTU-066127
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_290105
Associated BioSample	SAMEA4378328
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9719
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.81
Jumbo phage	No

Genome content
Genome length (bp)	39,356
GC content	42.72%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	92%
Average CDS length (bps)	601.00
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0114520_1	K07273	176.6	0	acm; lysozyme	N/A
PHROG	UHGV-0114520_1	phrog_6745	169.9	0	endolysin	lysis
UniRef90	UHGV-0114520_1	UniRef90_UPI0009315CF1	1122.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0114520_1	457412.RSAG_00790	421.0	0	CHAP domain	N/A
Pfam	UHGV-0114520_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0114520_1	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0114520_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0114520_1	PF01183,PF18342,PF14603,NF040678,TIGR04303,COG3757,COG3807	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_2	phrog_199	80.2	2e-23	holin	lysis
UniRef90	UHGV-0114520_2	UniRef90_UPI000930DB75	286.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0114520_2	411462.DORLON_00766	223.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0114520_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0114520_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0114520_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
PHROG	UHGV-0114520_3	phrog_134	60.0	3e-17	N/A	unknown function
UniRef90	UHGV-0114520_3	UniRef90_UPI00189C704B	53.5	0.0000000168	XkdX family protein	N/A
Pfam	UHGV-0114520_3	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0114520_3	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0114520_3	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114520_5	1232452.BAIB02000007_gene1610	69.3	0.000000000287	N/A	N/A
eggNOG-mapper	UHGV-0114520_6	1121866.AUGK01000003_gene1445	85.1	4.73e-16	N/A	N/A
PHROG	UHGV-0114520_7	phrog_6616	460.2	0	tail protein	tail
UniRef90	UHGV-0114520_7	UniRef90_A0A414EG21	986.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0114520_7	1121866.AUGK01000003_gene1439	254.0	0	Phage minor structural protein	N/A
COG	UHGV-0114520_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0114520_7	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_8	phrog_1194	70.1	3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0114520_8	33035.JPJF01000093_gene2242	158.0	0	N/A	N/A
structural_annotation	UHGV-0114520_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_9	phrog_1535	376.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0114520_9	UniRef90_A0A1C5RGR7	1190.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0114520_9	33035.JPJF01000093_gene2243	766.0	0	phage tail tape measure protein	N/A
COG	UHGV-0114520_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0114520_9	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_10	phrog_8355	96.3	1e-28	N/A	unknown function
UniRef90	UHGV-0114520_10	UniRef90_UPI001F2CFAB2	181.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0114520_10	1280692.AUJL01000027_gene2152	95.9	8.01e-24	N/A	N/A
Pfam	UHGV-0114520_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0114520_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_11	phrog_8300	86.0	3.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0114520_11	33035.JPJF01000093_gene2245	65.1	0.00000000000216	N/A	N/A
structural_annotation	UHGV-0114520_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_12	phrog_820	113.4	1.5e-33	major tail protein	tail
eggNOG-mapper	UHGV-0114520_12	33035.JPJF01000093_gene2246	178.0	0	N/A	N/A
structural_annotation	UHGV-0114520_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_13	phrog_2595	84.0	1.4e-24	head-tail connector protein	connector
UniRef90	UHGV-0114520_13	UniRef90_UPI001C0EB705	235.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0114520_13	483218.BACPEC_01150	123.0	2.66e-34	N/A	N/A
Pfam	UHGV-0114520_13	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0114520_13	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_14	phrog_556	52.8	0.0000000000000063	minor head protein	head and packaging
eggNOG-mapper	UHGV-0114520_14	742740.HMPREF9474_03509	177.0	0	N/A	N/A
PHROG	UHGV-0114520_15	phrog_8710	154.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0114520_15	742740.HMPREF9474_03508	150.0	0	N/A	N/A
structural_annotation	UHGV-0114520_15	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_16	phrog_541	95.1	5.9e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0114520_16	742740.HMPREF9474_03507	210.0	0	N/A	N/A
PHROG	UHGV-0114520_17	phrog_15682	62.2	5.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0114520_17	469618.FVAG_01311	71.2	0.00000000000000648	N/A	N/A
PHROG	UHGV-0114520_18	phrog_212	286.7	0	major head protein	head and packaging
UniRef90	UHGV-0114520_18	UniRef90_A0A416Q289	579.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0114520_18	1151292.QEW_2433	496.0	0	N/A	N/A
structural_annotation	UHGV-0114520_18	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_19	phrog_194	165.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0114520_19	UniRef90_UPI001D02A5C9	283.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0114520_19	1262449.CP6013_3198	168.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0114520_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0114520_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_22	phrog_1048	170.8	0	N/A	unknown function
UniRef90	UHGV-0114520_22	UniRef90_A0A373P4J3	293.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114520_22	457412.RSAG_01107	275.0	0	N/A	N/A
Pfam	UHGV-0114520_22	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0114520_22	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0114520_22	PF11195	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114520_23	476272.RUMHYD_00002	140.0	2.8e-32	N/A	N/A
PHROG	UHGV-0114520_26	phrog_581	244.9	0	minor head protein	head and packaging
UniRef90	UHGV-0114520_26	UniRef90_A0A414EGE0	1083.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0114520_26	33035.JPJF01000093_gene2255	522.0	0	N/A	N/A
Pfam	UHGV-0114520_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0114520_26	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0114520_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_27	phrog_25639	78.5	5.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0114520_27	742740.HMPREF9474_03502	65.1	0.000000000000225	N/A	N/A
PHROG	UHGV-0114520_28	phrog_533	271.1	0	portal protein	head and packaging
UniRef90	UHGV-0114520_28	UniRef90_UPI0011DCF338	841.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0114520_28	394503.Ccel_3049	524.0	0	N/A	N/A
structural_annotation	UHGV-0114520_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0114520_29	K06909	80.2	3.4e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0114520_29	phrog_10250	40.5	0.000000000022	N/A	unknown function
UniRef90	UHGV-0114520_29	UniRef90_UPI0011DDB413	850.0	0	terminase	N/A
eggNOG-mapper	UHGV-0114520_29	742740.HMPREF9474_03500	677.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0114520_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0114520_29	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0114520_30	K07474	142.9	3.50044e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0114520_30	phrog_51	157.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0114520_30	UniRef90_A0A415L5B5	300.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0114520_30	1298920.KI911353_gene4857	213.0	0	Terminase small subunit	N/A
Pfam	UHGV-0114520_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0114520_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0114520_30	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114520_32	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0114520_33	K07726	43.9	0.0000000000046	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0114520_33	phrog_2104	45.6	0.000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0114520_33	1410625.JHWK01000002_gene45	63.5	0.00000000000884	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0114520_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0114520_33	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
PHROG	UHGV-0114520_34	phrog_36	77.2	2.6e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0114520_34	UniRef90_UPI001C0ED9E5	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114520_34	97139.C824_05976	111.0	2.2e-29	sigma factor activity	N/A
Pfam	UHGV-0114520_34	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0114520_34	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0114520_34	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114520_38	PF17888	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114520_40	UniRef90_UPI00092FE141	250.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0114520_40	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
Pfam	UHGV-0114520_40	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
structural_annotation	UHGV-0114520_40	PF01710,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_43	phrog_7566	122.1	1.5e-36	N/A	unknown function
eggNOG-mapper	UHGV-0114520_43	97139.C824_00037	99.0	3.09e-25	N/A	N/A
eggNOG-mapper	UHGV-0114520_44	1298920.KI911353_gene4860	65.5	0.00000000000588	N/A	N/A
KOfam	UHGV-0114520_45	K03497	67.1	3.9e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0114520_45	phrog_15077	160.4	0	N/A	unknown function
UniRef90	UHGV-0114520_45	UniRef90_UPI0009306E3C	1204.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0114520_45	1235792.C808_00610	189.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0114520_45	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0114520_45	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0114520_45	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0114520_46	K03496	192.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0114520_46	phrog_164	160.5	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114520_46	UniRef90_A0A1C5REE7	473.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0114520_46	97139.C824_00725	270.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0114520_46	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0114520_46	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0114520_46	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_49	phrog_3584	148.3	4.76441e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114520_49	UniRef90_UPI001D0EB55A	319.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0114520_49	483218.BACPEC_01173	172.0	0	N/A	N/A
structural_annotation	UHGV-0114520_49	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114520_52	UniRef90_A0A1C5LFH5	140.0	3.61955e-42	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-0114520_52	478749.BRYFOR_07577	89.7	1.52e-22	Helix-turn-helix domain	N/A
Pfam	UHGV-0114520_52	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0114520_55	phrog_585	92.6	3.9e-27	N/A	unknown function
UniRef90	UHGV-0114520_55	UniRef90_A0A413B154	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114520_55	97138.C820_00628	87.4	2.02e-20	N/A	N/A
Pfam	UHGV-0114520_55	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0114520_55	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
KOfam	UHGV-0114520_56	K18830	67.7	2.2e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0114520_56	phrog_8	53.3	0.0000000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-0114520_56	UniRef90_A0A1C6ITJ1	197.0	0	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0114520_56	445972.ANACOL_03315	107.0	1.31e-28	N/A	N/A
Pfam	UHGV-0114520_56	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0114520_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0114520_56	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0114520_59	phrog_1847	345.0	0	N/A	unknown function
UniRef90	UHGV-0114520_59	UniRef90_A0A173ZYI4	613.0	0	T5orf172 domain	N/A
eggNOG-mapper	UHGV-0114520_59	1256908.HMPREF0373_00641	469.0	0	T5orf172	N/A
Pfam	UHGV-0114520_59	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0114520_59	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0114520_59	PF13250,NF041454	N/A	N/A	N/A	N/A
KOfam	UHGV-0114520_60	K14059	218.1	0	int; integrase	N/A
PHROG	UHGV-0114520_60	phrog_1	201.1	0	integrase	integration and excision
UniRef90	UHGV-0114520_60	UniRef90_A0A1C5LGT5	811.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0114520_60	476272.RUMHYD_02818	449.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0114520_60	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0114520_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0114520_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0114520_60	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A