UHGV-0115448 (vOTU-123981)

Viral Genome: UHGV-0115448

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0115448
vOTU ID	vOTU-123981
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_279363
Associated BioSample	SAMEA3888901
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.57 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9777
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.81
Jumbo phage	No

Genome content
Genome length (bp)	45,557
GC content	47.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	74
CDS density	87%
Average CDS length (bps)	534.00
Total tRNA genes	1
Suppressor tRNA genes	1

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0115448_1	1378168.N510_03079	141.0	1.72e-38	N/A	N/A
eggNOG-mapper	UHGV-0115448_2	1408437.JNJN01000043_gene802	187.0	0	N/A	N/A
PHROG	UHGV-0115448_3	phrog_16490	274.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0115448_3	445972.ANACOL_01880	280.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115448_4	476272.RUMHYD_01953	52.4	0.0000000748	N/A	N/A
eggNOG-mapper	UHGV-0115448_5	1408437.JNJN01000043_gene805	59.7	0.00000000131	N/A	N/A
structural_annotation	UHGV-0115448_7	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0115448_8	K01448	142.9	2.79979e-42	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0115448_8	phrog_435	152.1	4.2039e-45	endolysin	lysis
UniRef90	UHGV-0115448_8	UniRef90_A0A1Y4LLZ2	276.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0115448_8	1203606.HMPREF1526_00962	279.0	0	Ami_3	N/A
Pfam	UHGV-0115448_8	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0115448_8	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0115448_8	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_10	phrog_297	46.6	0.00000000000053	holin	lysis
UniRef90	UHGV-0115448_10	UniRef90_A0A417HAK5	131.0	4.25e-38	Phage holin	N/A
eggNOG-mapper	UHGV-0115448_10	1408437.JNJN01000039_gene392	102.0	1.45e-27	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0115448_10	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0115448_10	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0115448_10	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115448_10	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_11	phrog_23092	85.2	7.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0115448_11	1226322.HMPREF1545_00131	82.4	8.41e-19	N/A	N/A
PHROG	UHGV-0115448_12	phrog_1009	41.9	0.000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0115448_13	1121947.AUHK01000002_gene947	54.7	0.000000638	N/A	N/A
structural_annotation	UHGV-0115448_15	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
UniRef90	UHGV-0115448_16	UniRef90_A0A096B066	99.4	1.22e-19	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_17	693746.OBV_18220	65.1	0.000000000917	N/A	N/A
structural_annotation	UHGV-0115448_17	PF00354	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115448_19	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_20	phrog_32322	47.6	0.00000000000024	N/A	unknown function
UniRef90	UHGV-0115448_20	UniRef90_A0A1Y3SHI6	82.0	1.06e-17	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_20	1232446.BAIE02000011_gene1581	53.1	0.000000175	N/A	N/A
Pfam	UHGV-0115448_20	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-0115448_20	PF13754	N/A	N/A	N/A	N/A
KOfam	UHGV-0115448_21	K13276	72.9	2.4e-21	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0115448_21	phrog_11157	232.6	0	N/A	unknown function
UniRef90	UHGV-0115448_21	UniRef90_A0A1M5CXW0	304.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_21	742765.HMPREF9457_03368	291.0	0	N/A	N/A
Pfam	UHGV-0115448_21	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0115448_21	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0115448_21	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0115448_21	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_22	phrog_13879	240.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0115448_22	645991.Sgly_0356	152.0	2.29e-37	N/A	N/A
structural_annotation	UHGV-0115448_22	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_23	phrog_1194	83.0	3.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0115448_23	1449343.JQLQ01000002_gene1510	55.8	0.0000000262	N/A	N/A
Pfam	UHGV-0115448_23	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0115448_23	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_24	phrog_58	131.4	3.5e-39	tail length tape measure protein	tail
UniRef90	UHGV-0115448_24	UniRef90_A0A174WQ97	138.0	3.12e-29	Phage-like protein	N/A
eggNOG-mapper	UHGV-0115448_24	1121866.AUGK01000003_gene1437	192.0	0	phage tail tape measure protein	N/A
COG	UHGV-0115448_24	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0115448_27	phrog_130	122.5	4.5e-36	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0115448_27	UniRef90_A0A3A8W367	129.0	1.83e-34	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_27	663952.SDD27957_09050	117.0	5.39e-30	COG3617 Prophage antirepressor	N/A
Pfam	UHGV-0115448_27	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0115448_27	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0115448_27	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0115448_30	UniRef90_UPI001C3EAD16	94.7	1.86e-24	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-0115448_30	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_31	phrog_806	96.1	3.8e-28	N/A	unknown function
UniRef90	UHGV-0115448_31	UniRef90_A0A6N9P7A4	191.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115448_31	476272.RUMHYD_01730	148.0	3.79051e-42	N/A	N/A
Pfam	UHGV-0115448_31	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0115448_31	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0115448_31	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_32	phrog_130	72.2	9.8e-21	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0115448_32	UniRef90_A0A1V0QCE9	222.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_32	445972.ANACOL_01862	175.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0115448_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0115448_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0115448_32	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0115448_33	1121333.JMLH01000047_gene1011	71.6	0.0000000000000144	N/A	N/A
UniRef90	UHGV-0115448_34	UniRef90_A0A845R9E6	120.0	5.68e-33	N/A	N/A
Pfam	UHGV-0115448_34	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0115448_34	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_35	phrog_158	43.2	0.0000000000071	major tail protein	tail
eggNOG-mapper	UHGV-0115448_35	1121333.JMLH01000047_gene1013	198.0	0	N/A	N/A
structural_annotation	UHGV-0115448_35	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115448_36	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_37	phrog_5	46.0	0.0000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0115448_37	UniRef90_UPI001BBD4500	127.0	2.21e-34	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0115448_37	397290.C810_01411	94.7	2.97e-22	N/A	N/A
structural_annotation	UHGV-0115448_37	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0115448_38	1121866.AUGK01000003_gene1432	67.4	0.00000000000303	N/A	N/A
structural_annotation	UHGV-0115448_38	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0115448_39	UniRef90_A0A845R6M6	114.0	3.51e-31	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0115448_39	1298920.KI911353_gene2658	53.5	0.000000081	N/A	N/A
Pfam	UHGV-0115448_39	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0115448_39	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0115448_41	1226322.HMPREF1545_00051	149.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0115448_42	phrog_29	198.0	0	major head protein	head and packaging
UniRef90	UHGV-0115448_42	UniRef90_A0A7X5DZ98	556.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0115448_42	1347368.HG964404_gene4993	290.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0115448_42	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0115448_42	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_43	phrog_909	52.2	0.00000000000001	major head protein	head and packaging
eggNOG-mapper	UHGV-0115448_43	1298920.KI911353_gene2661	52.8	0.000000232	N/A	N/A
PHROG	UHGV-0115448_45	phrog_6072	47.9	0.0000000000002	N/A	unknown function
PHROG	UHGV-0115448_46	phrog_115	45.8	0.0000000000011	minor head protein	head and packaging
UniRef90	UHGV-0115448_46	UniRef90_A0A1C5WCC8	319.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
COG	UHGV-0115448_46	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115448_46	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_47	phrog_23707	77.9	1.3e-22	N/A	unknown function
UniRef90	UHGV-0115448_47	UniRef90_A0A1Q6KU34	111.0	1.98e-28	N/A	N/A
eggNOG-mapper	UHGV-0115448_47	411470.RUMGNA_00214	109.0	1.87e-28	N/A	N/A
structural_annotation	UHGV-0115448_47	PF08325,COG4900	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_48	phrog_64	204.3	0	portal protein	head and packaging
UniRef90	UHGV-0115448_48	UniRef90_A0A845RCM8	549.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0115448_48	1123263.AUKY01000015_gene1609	370.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0115448_48	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0115448_48	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_49	phrog_38	191.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0115448_49	UniRef90_A0A810QA10	997.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0115448_49	1298920.KI911353_gene2682	447.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0115448_49	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0115448_49	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115448_49	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
Pfam	UHGV-0115448_50	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0115448_51	phrog_374	57.0	5.4e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115448_51	UniRef90_A0A328KEI3	80.1	0.00000000000000626	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_51	411467.BACCAP_02633	90.9	8.69e-20	N/A	N/A
structural_annotation	UHGV-0115448_51	PF17375	N/A	N/A	N/A	N/A
KOfam	UHGV-0115448_52	K14060	131.0	1.1e-38	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0115448_52	phrog_125	162.4	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115448_52	UniRef90_A0A3C0RMG9	235.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0115448_52	742738.HMPREF9460_01133	234.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0115448_52	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0115448_52	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0115448_52	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0115448_53	UniRef90_UPI001C02D1DF	51.2	0.000000924	winged helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0115448_58	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0115448_58	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_59	phrog_12588	79.1	4.3e-23	N/A	unknown function
PHROG	UHGV-0115448_61	phrog_1485	109.1	4.4e-32	N/A	unknown function
UniRef90	UHGV-0115448_61	UniRef90_UPI001C127ADA	114.0	6.12e-30	nucleotide modification associated domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_61	1415774.U728_1099	101.0	1.51e-25	N/A	N/A
Pfam	UHGV-0115448_61	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
structural_annotation	UHGV-0115448_61	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_63	phrog_22543	44.6	0.0000000000015	N/A	unknown function
PHROG	UHGV-0115448_67	phrog_111	147.8	5.32493e-44	DNA methyltransferase	other
UniRef90	UHGV-0115448_67	UniRef90_A0A1C6GCR8	241.0	0	Phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0115448_67	445972.ANACOL_03344	201.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0115448_67	oMTase_00015	173.6	0	orphan methyltransferase	RM
Pfam	UHGV-0115448_67	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0115448_67	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0115448_70	phrog_25732	42.8	0.0000000000016	N/A	unknown function
UniRef90	UHGV-0115448_72	UniRef90_UPI001C3A10B1	73.2	0.0000000000000495	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0115448_72	1226322.HMPREF1545_00023	51.2	0.00000287	N/A	N/A
KOfam	UHGV-0115448_73	K00558	187.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0115448_73	phrog_116	228.8	0	DNA methyltransferase	other
UniRef90	UHGV-0115448_73	UniRef90_A0A316S792	590.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0115448_73	1216932.CM240_0666	460.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0115448_73	oMTase_00004	363.4	0	orphan methyltransferase	RM
Pfam	UHGV-0115448_73	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0115448_73	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0115448_73	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0115448_73	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A