UHGV-0119593 (vOTU-141243)

Viral Genome: UHGV-0119593

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0119593
vOTU ID	vOTU-141243
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_295720
Associated BioSample	SAMEA4431968
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.71 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	20
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9688
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.92
Jumbo phage	No

Genome content
Genome length (bp)	33,885
GC content	47.76%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	93%
Average CDS length (bps)	628.80
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0119593_1	K06400	350.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0119593_1	phrog_95	342.1	0	integrase	integration and excision
UniRef90	UHGV-0119593_1	UniRef90_A0A415Y8B5	633.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0119593_1	1160721.RBI_I01606	587.0	0	N/A	N/A
Pfam	UHGV-0119593_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0119593_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0119593_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0119593_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0119593_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_2	phrog_16260	62.0	7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0119593_2	2754.EH55_11435	130.0	3.75e-31	cell adhesion	N/A
COG	UHGV-0119593_2	COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0119593_3	K22300	56.9	4.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0119593_3	phrog_8	65.5	1.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0119593_3	UniRef90_UPI001E627292	74.7	0.0000000000000285	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0119593_3	1117108.PAALTS15_10030	63.2	0.0000000000302	TRANSCRIPTIONal	N/A
Pfam	UHGV-0119593_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0119593_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0119593_3	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_6	phrog_2232	174.0	0	N/A	unknown function
UniRef90	UHGV-0119593_6	UniRef90_UPI001CCCDE3F	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-0119593_6	357809.Cphy_2977	146.0	8.44001e-40	N/A	N/A
Pfam	UHGV-0119593_6	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
KOfam	UHGV-0119593_10	K01449	58.5	1.1e-16	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0119593_10	phrog_18750	149.7	1.96182e-44	N/A	unknown function
UniRef90	UHGV-0119593_10	UniRef90_A0A3D5TM41	214.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0119593_10	1203606.HMPREF1526_01876	144.0	1.18001e-40	Cell wall hydrolase	N/A
Pfam	UHGV-0119593_10	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0119593_10	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0119593_10	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_11	phrog_924	43.8	0.0000000000048	N/A	unknown function
eggNOG-mapper	UHGV-0119593_11	665950.HMPREF1025_02540	76.3	0.0000000000000123	N/A	N/A
Pfam	UHGV-0119593_11	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0119593_15	phrog_824	135.3	2e-40	N/A	unknown function
UniRef90	UHGV-0119593_15	UniRef90_A0A3D5TLJ2	333.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0119593_15	1235792.C808_00075	137.0	1.53e-37	VRR_NUC	N/A
Pfam	UHGV-0119593_15	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0119593_15	PF08774,COG1996	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_16	phrog_7445	60.7	2.6e-17	N/A	unknown function
UniRef90	UHGV-0119593_16	UniRef90_UPI001B3C69A2	75.1	0.00000000000000315	Cas9 inhibitor AcrIIA9 family protein	N/A
Pfam	UHGV-0119593_16	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0119593_16	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_17	phrog_8470	303.4	0	N/A	unknown function
UniRef90	UHGV-0119593_17	UniRef90_A0A238ZSA1	214.0	0	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0119593_17	649747.HMPREF0083_05326	219.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0119593_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0119593_17	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_18	phrog_15609	145.0	4.80645e-43	N/A	unknown function
UniRef90	UHGV-0119593_18	UniRef90_A0A3A6ESC2	107.0	3.36e-22	N/A	N/A
eggNOG-mapper	UHGV-0119593_18	641112.ACOK01000073_gene2872	70.5	0.0000000000374	N/A	N/A
Pfam	UHGV-0119593_18	PF11300	N/A	N/A	N/A	DUF3102
structural_annotation	UHGV-0119593_18	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_23	phrog_24518	46.5	0.00000000000051	N/A	unknown function
eggNOG-mapper	UHGV-0119593_23	693746.OBV_25370	82.4	4.94e-17	N/A	N/A
PHROG	UHGV-0119593_24	phrog_3584	128.9	3.4e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0119593_24	537013.CLOSTMETH_02141	79.7	0.00000000000000165	N/A	N/A
structural_annotation	UHGV-0119593_24	PF21578,MF_00360	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119593_25	UniRef90_UPI00082EBC63	54.3	0.00000043	Lar family restriction alleviation protein	N/A
PHROG	UHGV-0119593_26	phrog_8684	80.9	1e-24	N/A	unknown function
UniRef90	UHGV-0119593_26	UniRef90_UPI0011A28856	90.9	5.2e-21	YopX family protein	N/A
eggNOG-mapper	UHGV-0119593_26	742767.HMPREF9456_03352	81.6	4.52e-18	YopX protein	N/A
Pfam	UHGV-0119593_26	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0119593_26	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0119593_26	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_27	phrog_11237	79.0	6.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0119593_27	537013.CLOSTMETH_01096	59.7	0.00000000106	N/A	N/A
structural_annotation	UHGV-0119593_27	TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0119593_28	K00571	158.9	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0119593_28	phrog_12862	165.5	0	N/A	unknown function
UniRef90	UHGV-0119593_28	UniRef90_UPI000A26DFF4	328.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0119593_28	1120998.AUFC01000030_gene2227	313.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0119593_28	MTase_II_00037	147.2	0	Type II methyltransferase	RM
Pfam	UHGV-0119593_28	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0119593_28	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0119593_28	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_29	phrog_12389	77.8	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0119593_29	1196322.A370_03932	63.5	0.000000000329	N/A	N/A
PHROG	UHGV-0119593_30	phrog_20533	58.6	9.3e-17	N/A	unknown function
UniRef90	UHGV-0119593_30	UniRef90_A0A7C6U4T3	174.0	0	PLD phosphodiesterase domain-containing protein	N/A
eggNOG-mapper	UHGV-0119593_30	1123058.KB894251_gene2369	77.4	0.00000000000000643	N/A	N/A
structural_annotation	UHGV-0119593_30	PF17941,MF_01918,NF010490,COG3886	N/A	N/A	N/A	N/A
KOfam	UHGV-0119593_31	K07474	48.0	0.0000000000004	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0119593_31	phrog_51	52.8	0.0000000000000044	terminase small subunit	head and packaging
UniRef90	UHGV-0119593_31	UniRef90_UPI000C7A7EA3	76.6	0.00000000000000263	terminase small subunit	N/A
eggNOG-mapper	UHGV-0119593_31	1158607.UAU_05157	63.2	0.0000000000699	Terminase small subunit	N/A
Pfam	UHGV-0119593_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
KOfam	UHGV-0119593_32	K06909	119.3	4.3e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0119593_32	phrog_10250	151.0	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0119593_32	UniRef90_UPI000B8B31AD	482.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0119593_32	1226322.HMPREF1545_00043	473.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0119593_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0119593_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0119593_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0119593_32	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_34	phrog_533	214.6	0	portal protein	head and packaging
UniRef90	UHGV-0119593_34	UniRef90_UPI000680A1DB	476.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0119593_34	693746.OBV_18040	381.0	0	N/A	N/A
structural_annotation	UHGV-0119593_34	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_35	phrog_581	226.2	0	minor head protein	head and packaging
UniRef90	UHGV-0119593_35	UniRef90_UPI0006814CA4	604.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0119593_35	693746.OBV_18050	454.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0119593_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0119593_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119593_35	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_37	phrog_194	107.2	1.9e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0119593_37	UniRef90_A0A2N0ULW9	164.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0119593_37	742765.HMPREF9457_02126	145.0	1.96995e-41	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0119593_37	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0119593_37	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_38	phrog_422	243.6	0	major head protein	head and packaging
UniRef90	UHGV-0119593_38	UniRef90_W0U896	369.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0119593_38	693746.OBV_18090	402.0	0	N/A	N/A
structural_annotation	UHGV-0119593_38	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-0119593_39	PF13912	N/A	N/A	C2H2-type zinc finger	zf-C2H2_6
PHROG	UHGV-0119593_40	phrog_541	92.2	4.7e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0119593_40	1304866.K413DRAFT_3039	85.1	1.04e-19	N/A	N/A
PHROG	UHGV-0119593_41	phrog_3366	43.1	0.00000000000041	N/A	unknown function
eggNOG-mapper	UHGV-0119593_41	1449050.JNLE01000003_gene3887	77.4	9.64e-17	N/A	N/A
Pfam	UHGV-0119593_41	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0119593_41	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_42	phrog_556	95.4	3.9e-28	minor head protein	head and packaging
UniRef90	UHGV-0119593_42	UniRef90_UPI001B3C5A2B	144.0	5.05995e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-0119593_42	1449050.JNLE01000003_gene3886	130.0	1.78e-36	N/A	N/A
Pfam	UHGV-0119593_42	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0119593_42	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_43	phrog_3266	97.9	7.9e-29	tail completion	connector
eggNOG-mapper	UHGV-0119593_43	1304866.K413DRAFT_3042	132.0	1.62e-37	N/A	N/A
structural_annotation	UHGV-0119593_43	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_44	phrog_3099	138.1	5.10003e-41	N/A	unknown function
eggNOG-mapper	UHGV-0119593_44	1304866.K413DRAFT_3043	155.0	0	N/A	N/A
structural_annotation	UHGV-0119593_44	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_45	phrog_11299	111.9	4.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-0119593_45	1298920.KI911353_gene2067	75.9	0.00000000000000282	N/A	N/A
structural_annotation	UHGV-0119593_45	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_46	phrog_706	142.7	2.10055e-42	N/A	unknown function
UniRef90	UHGV-0119593_46	UniRef90_UPI00051C36A4	197.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0119593_46	1449050.JNLE01000003_gene3882	196.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0119593_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0119593_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_47	phrog_1535	128.6	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0119593_47	1232443.BAIA02000078_gene18	121.0	1.84e-25	phage tail tape measure protein	N/A
COG	UHGV-0119593_47	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119593_47	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_48	phrog_1194	66.3	4.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0119593_48	1211844.CBLM010000023_gene979	50.8	0.0000027	N/A	N/A
Pfam	UHGV-0119593_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0119593_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0119593_49	phrog_6616	117.5	1.3e-35	tail protein	tail
eggNOG-mapper	UHGV-0119593_49	469596.HMPREF9488_01318	171.0	1.23006e-41	N/A	N/A
structural_annotation	UHGV-0119593_49	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119593_50	PF10651,NF009453	N/A	N/A	N/A	N/A