UHGV-0120802 (vOTU-067004)

Viral Genome: UHGV-0120802

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0120802
vOTU ID	vOTU-067004
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_293020
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.28 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	14
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.38
Jumbo phage	No

Genome content
Genome length (bp)	35,821
GC content	41.71%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	91%
Average CDS length (bps)	614.49
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0120802_1	phrog_6616	464.5	0	tail protein	tail
UniRef90	UHGV-0120802_1	UniRef90_A0A414EG21	1009.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0120802_1	1121866.AUGK01000003_gene1439	248.0	0	Phage minor structural protein	N/A
COG	UHGV-0120802_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0120802_1	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_2	phrog_1194	69.0	7.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0120802_2	33035.JPJF01000093_gene2242	158.0	0	N/A	N/A
structural_annotation	UHGV-0120802_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_3	phrog_1535	277.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0120802_3	UniRef90_A0A1C5RGR7	970.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0120802_3	33035.JPJF01000093_gene2243	531.0	0	phage tail tape measure protein	N/A
COG	UHGV-0120802_3	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0120802_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_4	phrog_59	139.4	1.49995e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120802_4	UniRef90_A0A139QI12	151.0	2.53635e-43	HNH homing endonuclease	N/A
eggNOG-mapper	UHGV-0120802_4	1206110.L0P6F5_9CAUD	144.0	5.84005e-41	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0120802_4	HEase_00016	99.8	1.1e-29	homing endonuclease	RM
Pfam	UHGV-0120802_4	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0120802_4	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0120802_4	PF07463,PF07453	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_5	phrog_1535	88.5	6.1e-26	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0120802_5	33035.JPJF01000093_gene2243	274.0	0	phage tail tape measure protein	N/A
COG	UHGV-0120802_5	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0120802_6	phrog_8355	76.7	1.7e-22	N/A	unknown function
UniRef90	UHGV-0120802_6	UniRef90_UPI001F2CFAB2	145.0	9.66896e-44	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0120802_6	1294142.CINTURNW_1037	67.4	0.0000000000000861	N/A	N/A
PHROG	UHGV-0120802_7	phrog_8300	84.5	9.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0120802_7	742740.HMPREF9474_03512	102.0	8.66e-27	N/A	N/A
structural_annotation	UHGV-0120802_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_8	phrog_820	110.6	1.1e-32	major tail protein	tail
eggNOG-mapper	UHGV-0120802_8	33035.JPJF01000093_gene2246	179.0	0	N/A	N/A
structural_annotation	UHGV-0120802_8	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_9	phrog_2595	92.6	3.3e-27	head-tail connector protein	connector
UniRef90	UHGV-0120802_9	UniRef90_UPI001C0EB705	245.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0120802_9	483218.BACPEC_01150	124.0	6.58e-35	N/A	N/A
Pfam	UHGV-0120802_9	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0120802_9	PF12691,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120802_10	33035.JPJF01000093_gene2248	228.0	0	N/A	N/A
structural_annotation	UHGV-0120802_10	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_11	phrog_8710	141.7	1.99965e-42	N/A	unknown function
eggNOG-mapper	UHGV-0120802_11	742740.HMPREF9474_03508	141.0	2.86005e-42	N/A	N/A
structural_annotation	UHGV-0120802_11	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_12	phrog_541	91.1	1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0120802_12	1298920.KI911353_gene4848	207.0	0	N/A	N/A
PHROG	UHGV-0120802_13	phrog_422	283.3	0	major head protein	head and packaging
UniRef90	UHGV-0120802_13	UniRef90_A0A414EG86	607.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0120802_13	663278.Ethha_1589	402.0	0	N/A	N/A
structural_annotation	UHGV-0120802_13	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_14	phrog_2303	162.3	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0120802_14	1304866.K413DRAFT_0806	187.0	0	N/A	N/A
PHROG	UHGV-0120802_16	phrog_478	117.0	9.8e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0120802_16	UniRef90_R6R5K5	132.0	1.82e-37	Protein 64 protein	N/A
eggNOG-mapper	UHGV-0120802_16	521003.COLINT_02327	132.0	6.14e-38	N/A	N/A
PHROG	UHGV-0120802_17	phrog_1048	171.7	0	N/A	unknown function
UniRef90	UHGV-0120802_17	UniRef90_UPI0009312F1B	330.0	0	N/A	N/A
eggNOG-mapper	UHGV-0120802_17	457412.RSAG_01107	263.0	0	N/A	N/A
Pfam	UHGV-0120802_17	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0120802_17	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0120802_17	PF11195	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120802_18	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_19	phrog_581	235.9	0	minor head protein	head and packaging
UniRef90	UHGV-0120802_19	UniRef90_UPI0009303339	1545.0	0	putative zinc-binding metallopeptidase	N/A
eggNOG-mapper	UHGV-0120802_19	33035.JPJF01000093_gene2255	509.0	0	N/A	N/A
Pfam	UHGV-0120802_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0120802_19	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0120802_19	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_20	phrog_25639	104.9	3.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0120802_20	742740.HMPREF9474_03502	72.8	4.88e-16	N/A	N/A
PHROG	UHGV-0120802_21	phrog_533	302.7	0	portal protein	head and packaging
UniRef90	UHGV-0120802_21	UniRef90_A0A1C5YZW6	1003.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0120802_21	742740.HMPREF9474_03501	719.0	0	N/A	N/A
structural_annotation	UHGV-0120802_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0120802_22	K06909	82.9	5.5e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0120802_22	phrog_2	66.7	5.2e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0120802_22	UniRef90_A0A414SEW8	904.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0120802_22	742740.HMPREF9474_03500	787.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0120802_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0120802_22	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0120802_23	K07474	137.1	2.1e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0120802_23	phrog_51	148.9	2.52234e-44	terminase small subunit	head and packaging
UniRef90	UHGV-0120802_23	UniRef90_A0A415L5B5	298.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0120802_23	1298920.KI911353_gene4857	217.0	0	Terminase small subunit	N/A
Pfam	UHGV-0120802_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0120802_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0120802_23	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120802_24	610130.Closa_1386	104.0	1.89e-26	N/A	N/A
structural_annotation	UHGV-0120802_24	PF15968	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120802_25	610130.Closa_1385	311.0	0	N/A	N/A
structural_annotation	UHGV-0120802_25	PF20505	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_26	phrog_36	47.2	0.00000000000049	transcriptional regulator	transcription regulation
UniRef90	UHGV-0120802_26	UniRef90_UPI000931D7F9	239.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0120802_26	411459.RUMOBE_00943	243.0	0	N/A	N/A
structural_annotation	UHGV-0120802_26	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120802_30	UniRef90_A0A1C5LDM6	249.0	0	Polar chromosome segregation protein	N/A
Pfam	UHGV-0120802_30	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
Pfam	UHGV-0120802_30	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
structural_annotation	UHGV-0120802_30	PF01710,NF040595	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120802_33	1298920.KI911353_gene4860	68.2	0.000000000000528	N/A	N/A
PHROG	UHGV-0120802_34	phrog_17690	126.5	1.1e-37	N/A	unknown function
UniRef90	UHGV-0120802_34	UniRef90_A0A6L5XWF4	102.0	1.38e-25	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0120802_34	33035.JPJF01000123_gene2433	149.0	9.80909e-45	N/A	N/A
PHROG	UHGV-0120802_35	phrog_17842	60.0	2.9e-17	N/A	unknown function
KOfam	UHGV-0120802_36	K03497	70.1	4.5e-20	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0120802_36	phrog_15077	162.8	0	N/A	unknown function
UniRef90	UHGV-0120802_36	UniRef90_UPI0009306E3C	1154.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0120802_36	1235792.C808_00610	187.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0120802_36	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0120802_36	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0120802_36	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0120802_37	K03496	197.4	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0120802_37	phrog_164	157.9	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120802_37	UniRef90_A0A1C5REE7	452.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0120802_37	97139.C824_00725	273.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0120802_37	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0120802_37	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0120802_37	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120802_38	UniRef90_A0A1C5RDL1	213.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0120802_38	411461.DORFOR_01140	91.7	2.62e-21	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-0120802_38	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0120802_38	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_39	phrog_3584	153.7	1.4013e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120802_39	UniRef90_UPI001D0EB55A	325.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0120802_39	483218.BACPEC_01173	182.0	0	N/A	N/A
structural_annotation	UHGV-0120802_39	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120802_43	UniRef90_A0A1C5LFH5	138.0	2.09004e-41	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-0120802_43	478749.BRYFOR_07577	88.6	2.21e-22	Helix-turn-helix domain	N/A
Pfam	UHGV-0120802_43	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
UniRef90	UHGV-0120802_45	UniRef90_UPI001D0976C2	256.0	0	actin family protein	N/A
PHROG	UHGV-0120802_47	phrog_31760	61.1	1.1e-17	N/A	unknown function
UniRef90	UHGV-0120802_48	UniRef90_A0A414EGH7	117.0	2.95e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0120802_48	394503.Ccel_3114	52.0	0.0000000539	N/A	N/A
structural_annotation	UHGV-0120802_48	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120802_49	UniRef90_A0A414EGA2	193.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0120802_49	1235798.C817_00736	98.2	7.25e-25	addiction module antidote protein HigA	N/A
COG	UHGV-0120802_49	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0120802_49	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_50	phrog_27136	154.9	0	N/A	unknown function
UniRef90	UHGV-0120802_50	UniRef90_UPI000A966D6C	446.0	0	Zn-ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0120802_50	1282664.H354_06486	139.0	4.78e-38	Short C-terminal domain	N/A
PHROG	UHGV-0120802_51	phrog_87	79.1	4.6e-23	metallo-protease	other
UniRef90	UHGV-0120802_51	UniRef90_A0A414EG59	234.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0120802_51	457412.RSAG_00798	193.0	0	Zn peptidase	N/A
COG	UHGV-0120802_51	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0120802_51	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0120802_52	phrog_2158	209.2	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0120802_52	UniRef90_A0A1C6K8Q1	626.0	0	Abortive infection bacteriophage resistance protein	N/A
eggNOG-mapper	UHGV-0120802_52	476272.RUMHYD_02820	535.0	0	Abi-like protein	N/A
PADLOC	UHGV-0120802_52	AbiD	122.3	8.5e-36	AbiD	Abi
Pfam	UHGV-0120802_52	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0120802_52	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0120802_52	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-0120802_53	K14059	219.0	0	int; integrase	N/A
PHROG	UHGV-0120802_53	phrog_1	201.9	0	integrase	integration and excision
UniRef90	UHGV-0120802_53	UniRef90_A0A1C5LGT5	816.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0120802_53	476272.RUMHYD_02818	451.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0120802_53	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0120802_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0120802_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0120802_53	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A