UHGV-0121296 (vOTU-066107)

Viral Genome: UHGV-0121296

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0121296
vOTU ID	vOTU-066107
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_294823
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.86
Jumbo phage	No

Genome content
Genome length (bp)	39,045
GC content	37.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	91%
Average CDS length (bps)	604.98
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0121296_1	phrog_21357	131.1	6.2e-39	endolysin	lysis
UniRef90	UHGV-0121296_1	UniRef90_UPI00156F8A64	484.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0121296_1	693746.OBV_19030	143.0	1.19e-39	CHAP domain	N/A
Pfam	UHGV-0121296_1	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0121296_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0121296_1	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0121296_1	PF01471,PF00877,TIGR02594,TIGR03979,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_2	phrog_199	50.9	0.000000000000018	holin	lysis
UniRef90	UHGV-0121296_2	UniRef90_UPI00156FA5B5	251.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0121296_2	411470.RUMGNA_02086	136.0	3.46e-39	N/A	N/A
Pfam	UHGV-0121296_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0121296_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0121296_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0121296_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_4	phrog_2566	77.7	1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0121296_4	1232453.BAIF02000058_gene1639	61.6	0.0000000000138	N/A	N/A
PHROG	UHGV-0121296_5	phrog_16267	187.3	0	N/A	unknown function
UniRef90	UHGV-0121296_5	UniRef90_A0A417V835	2067.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0121296_5	1294142.CINTURNW_1706	209.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0121296_5	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0121296_5	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0121296_6	phrog_1401	55.4	0.0000000000000011	N/A	unknown function
UniRef90	UHGV-0121296_6	UniRef90_UPI001A9A8A65	56.2	0.000000159	N/A	N/A
structural_annotation	UHGV-0121296_6	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_7	phrog_1194	79.4	4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0121296_7	33035.JPJF01000093_gene2242	130.0	7.61e-38	N/A	N/A
structural_annotation	UHGV-0121296_7	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_8	phrog_1535	262.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0121296_8	UniRef90_A0A1C5RRP4	468.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0121296_8	742740.HMPREF9474_03514	402.0	0	tape measure	N/A
COG	UHGV-0121296_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0121296_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_9	phrog_8355	101.7	2.7e-30	N/A	unknown function
UniRef90	UHGV-0121296_9	UniRef90_UPI001D0684E3	126.0	3.79e-36	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0121296_9	33035.JPJF01000093_gene2244	97.4	1.11e-25	N/A	N/A
PHROG	UHGV-0121296_10	phrog_8300	86.7	2.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0121296_10	1282664.H354_06701	82.8	2.59e-19	N/A	N/A
structural_annotation	UHGV-0121296_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_11	phrog_820	128.5	3.4e-38	major tail protein	tail
eggNOG-mapper	UHGV-0121296_11	1282664.H354_06691	202.0	0	N/A	N/A
structural_annotation	UHGV-0121296_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_12	phrog_2595	102.4	3.3e-30	head-tail connector protein	connector
UniRef90	UHGV-0121296_12	UniRef90_UPI001D0627B3	202.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0121296_12	679192.HMPREF9013_1297	139.0	8.14995e-41	N/A	N/A
Pfam	UHGV-0121296_12	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0121296_12	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_13	phrog_556	57.2	2.7e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0121296_13	742740.HMPREF9474_03509	161.0	0	N/A	N/A
PHROG	UHGV-0121296_14	phrog_8710	145.2	1.59748e-43	N/A	unknown function
eggNOG-mapper	UHGV-0121296_14	742740.HMPREF9474_03508	143.0	7.03452e-43	N/A	N/A
structural_annotation	UHGV-0121296_14	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_15	phrog_541	71.0	1.5e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0121296_15	742740.HMPREF9474_03507	135.0	1.72e-39	N/A	N/A
PHROG	UHGV-0121296_16	phrog_422	277.7	0	major head protein	head and packaging
UniRef90	UHGV-0121296_16	UniRef90_A0A417V845	596.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0121296_16	663278.Ethha_1589	411.0	0	N/A	N/A
structural_annotation	UHGV-0121296_16	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_17	phrog_2303	143.8	1.19951e-42	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0121296_17	742740.HMPREF9474_03504	174.0	0	N/A	N/A
structural_annotation	UHGV-0121296_18	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_20	phrog_581	255.1	0	minor head protein	head and packaging
UniRef90	UHGV-0121296_20	UniRef90_UPI0015715021	1021.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0121296_20	33035.JPJF01000093_gene2255	431.0	0	N/A	N/A
Pfam	UHGV-0121296_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0121296_20	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0121296_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_21	phrog_533	281.0	0	portal protein	head and packaging
UniRef90	UHGV-0121296_21	UniRef90_A0A417V837	1060.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0121296_21	33035.JPJF01000093_gene2257	592.0	0	N/A	N/A
structural_annotation	UHGV-0121296_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0121296_22	K06909	105.1	8e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0121296_22	phrog_2	72.9	6.6e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0121296_22	UniRef90_A0A417V8L6	923.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0121296_22	1304866.K413DRAFT_0811	744.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0121296_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0121296_22	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0121296_23	K07474	131.4	1.2e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0121296_23	phrog_51	146.6	1.30321e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0121296_23	UniRef90_A0A417V811	315.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0121296_23	1298920.KI911353_gene4857	213.0	0	Terminase small subunit	N/A
Pfam	UHGV-0121296_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0121296_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0121296_23	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_24	phrog_478	127.8	4.2e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0121296_24	UniRef90_A0A285PT53	198.0	0	Prokaryotic membrane lipoprotein lipid attachment site profile	N/A
eggNOG-mapper	UHGV-0121296_24	1235792.C808_00058	185.0	0	N/A	N/A
PHROG	UHGV-0121296_25	phrog_1048	174.9	0	N/A	unknown function
UniRef90	UHGV-0121296_25	UniRef90_A0A417V882	345.0	0	N/A	N/A
eggNOG-mapper	UHGV-0121296_25	457412.RSAG_01107	191.0	0	N/A	N/A
Pfam	UHGV-0121296_25	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0121296_25	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0121296_25	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_27	phrog_36	78.8	8.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0121296_27	UniRef90_UPI001CD68077	109.0	4.47e-28	N/A	N/A
eggNOG-mapper	UHGV-0121296_27	478749.BRYFOR_07600	86.7	1.83e-19	sigma factor activity	N/A
COG	UHGV-0121296_27	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0121296_27	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0121296_30	UniRef90_A0A374AM63	46.2	0.00000503	N/A	N/A
Pfam	UHGV-0121296_30	PF12664	N/A	N/A	N/A	DUF3789
eggNOG-mapper	UHGV-0121296_34	1121871.AUAT01000002_gene1365	63.2	0.000000000192	N/A	N/A
PHROG	UHGV-0121296_35	phrog_424	90.3	1.8e-26	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0121296_35	UniRef90_C0CTA2	569.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0121296_35	33035.JPJF01000123_gene2435	590.0	0	N/A	N/A
Pfam	UHGV-0121296_35	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0121296_35	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0121296_35	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_37	phrog_17690	121.7	3.4e-36	N/A	unknown function
UniRef90	UHGV-0121296_37	UniRef90_A0A6L5XWF4	65.9	0.000000000109	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0121296_37	33035.JPJF01000123_gene2433	75.9	0.00000000000000279	N/A	N/A
PHROG	UHGV-0121296_39	phrog_1123	54.2	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0121296_39	1308863.U5J9F3_9CAUD	58.9	0.000000000894	N/A	N/A
structural_annotation	UHGV-0121296_39	PF03551,MF_01804,TIGR03433,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_40	phrog_16304	126.7	2.4e-37	N/A	unknown function
UniRef90	UHGV-0121296_40	UniRef90_L1Q6L3	261.0	0	N/A	N/A
eggNOG-mapper	UHGV-0121296_40	411490.ANACAC_00800	157.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0121296_41	phrog_16304	110.8	1.7e-32	N/A	unknown function
UniRef90	UHGV-0121296_41	UniRef90_UPI001D0811D8	52.8	0.000000557	N/A	N/A
eggNOG-mapper	UHGV-0121296_41	33035.JPJF01000071_gene4467	52.4	0.000000645	N/A	N/A
Pfam	UHGV-0121296_41	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0121296_42	phrog_190	126.5	1.8e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121296_42	UniRef90_A0A5B3G7W7	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-0121296_42	862517.HMPREF9225_1657	122.0	1.15e-34	N/A	N/A
Pfam	UHGV-0121296_42	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0121296_42	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_43	phrog_398	228.3	0	N/A	unknown function
UniRef90	UHGV-0121296_43	UniRef90_UPI0001F01BA5	313.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0121296_43	33035.JPJF01000122_gene2462	268.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0121296_43	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0121296_43	PF16784,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_44	phrog_14970	254.4	0	N/A	unknown function
UniRef90	UHGV-0121296_44	UniRef90_UPI00123F00F5	194.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0121296_44	1410632.JHWW01000001_gene1266	197.0	0	double-strand break repair protein	N/A
COG	UHGV-0121296_44	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0121296_44	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_45	phrog_253	150.7	5.60519e-45	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121296_45	UniRef90_UPI00156F9B5D	147.0	4.30058e-42	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0121296_45	1256908.HMPREF0373_00657	142.0	5.96e-41	Siphovirus Gp157	N/A
Pfam	UHGV-0121296_45	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0121296_45	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0121296_49	phrog_6058	108.6	2e-32	N/A	unknown function
UniRef90	UHGV-0121296_49	UniRef90_A0A0V8QBN7	71.2	0.0000000000000233	Histone-lysine N-methyltransferase	N/A
eggNOG-mapper	UHGV-0121296_49	658088.HMPREF0987_00666	82.4	1.28e-19	N/A	N/A
structural_annotation	UHGV-0121296_49	PF12728,NF040990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0121296_50	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0121296_53	UniRef90_C4GAU8	90.1	2.16e-22	Toxin-antitoxin system, antitoxin component, Xre family	N/A
eggNOG-mapper	UHGV-0121296_53	626523.GCWU000342_01049	90.1	3.62e-23	N/A	N/A
Pfam	UHGV-0121296_53	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0121296_53	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0121296_53	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0121296_54	K01356	137.7	1.3e-40	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0121296_54	phrog_4	132.7	2.9e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0121296_54	UniRef90_UPI00156D79C9	256.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0121296_54	411490.ANACAC_00815	219.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0121296_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0121296_54	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0121296_54	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0121296_54	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0121296_55	UniRef90_UPI001C02AC42	241.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0121296_55	679192.HMPREF9013_1325	174.0	0	N/A	N/A
PHROG	UHGV-0121296_56	phrog_2546	97.4	2.1e-28	N/A	unknown function
UniRef90	UHGV-0121296_56	UniRef90_UPI001D05CE63	87.0	7.77e-18	hydrogenase maturation nickel metallochaperone HypA	N/A
eggNOG-mapper	UHGV-0121296_56	218140.BPSY_1432	55.1	0.0000000797	N/A	N/A
structural_annotation	UHGV-0121296_56	PF02701	N/A	N/A	N/A	N/A
KOfam	UHGV-0121296_57	K07171	59.0	1.2e-17	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0121296_57	phrog_1412	167.8	0	antitoxin mazE-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0121296_57	UniRef90_UPI00156F5271	540.0	0	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0121296_57	1235792.C808_05257	341.0	0	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-0121296_57	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0121296_57	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0121296_57	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
KOfam	UHGV-0121296_58	K14059	106.4	4.1e-31	int; integrase	N/A
PHROG	UHGV-0121296_58	phrog_1	145.0	6.50202e-43	integrase	integration and excision
UniRef90	UHGV-0121296_58	UniRef90_A0A5B3G8B3	836.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0121296_58	428125.CLOLEP_01345	509.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0121296_58	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0121296_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0121296_58	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0121296_58	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A