UHGV-0127448 (vOTU-023331)

Viral Genome: UHGV-0127448

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0127448
vOTU ID	vOTU-023331
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_334424
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.34 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9799
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.25
Jumbo phage	No

Genome content
Genome length (bp)	46,310
GC content	40.03%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	83%
Average CDS length (bps)	528.62
Total tRNA genes	5
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0127448_1	phrog_4433	219.3	0	N/A	unknown function
UniRef90	UHGV-0127448_1	UniRef90_UPI00045B9709	118.0	1.44e-30	collagen-like protein	N/A
eggNOG-mapper	UHGV-0127448_1	665950.HMPREF1025_01373	162.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0127448_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
eggNOG-mapper	UHGV-0127448_2	1232453.BAIF02000057_gene1135	66.6	0.00000000000393	N/A	N/A
KOfam	UHGV-0127448_5	K19171	46.0	0.0000000000002	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0127448_5	phrog_77	139.3	2.89999e-41	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0127448_5	UniRef90_A0A174JMG0	464.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0127448_5	1232453.BAIF02000057_gene1134	498.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0127448_5	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0127448_5	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_6	phrog_26861	92.2	2.1e-27	N/A	unknown function
UniRef90	UHGV-0127448_6	UniRef90_A0A173RCS5	352.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0127448_6	1120998.AUFC01000016_gene32	115.0	1.34e-29	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-0127448_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0127448_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0127448_6	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_11	phrog_4608	156.6	0	anti-repressor	transcription regulation
UniRef90	UHGV-0127448_11	UniRef90_UPI001D00AF42	526.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_11	926561.KB900622_gene670	174.0	0	ORF6N domain	N/A
Pfam	UHGV-0127448_11	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0127448_11	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0127448_11	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0127448_13	K18830	66.2	7.7e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0127448_13	phrog_8	55.4	0.0000000000000017	transcriptional regulator	transcription regulation
UniRef90	UHGV-0127448_13	UniRef90_A0A1Q6LL24	145.0	3.74987e-42	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_13	642492.Clole_0718	115.0	1.19e-31	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0127448_13	retron_type_VI_hth_cluster2_1	43.4	0.0000000000075	N/A	Retron
Pfam	UHGV-0127448_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0127448_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0127448_13	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0127448_14	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0127448_14	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0127448_15	1232452.BAIB02000007_gene1607	77.4	2.04e-16	N/A	N/A
PHROG	UHGV-0127448_17	phrog_17196	139.7	6.60012e-42	kinase	other
eggNOG-mapper	UHGV-0127448_17	483218.BACPEC_01141	183.0	0	N/A	N/A
structural_annotation	UHGV-0127448_17	PF19537,PF13619,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_18	phrog_18190	485.9	0	N/A	unknown function
UniRef90	UHGV-0127448_18	UniRef90_A0A173UFM3	901.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_18	397290.C810_05239	303.0	0	N/A	N/A
Pfam	UHGV-0127448_18	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0127448_18	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_19	phrog_1194	44.5	0.0000000000021	N/A	unknown function
Pfam	UHGV-0127448_19	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0127448_19	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_20	phrog_130	147.1	8.68805e-44	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0127448_20	UniRef90_A0A1I0BKG6	297.0	0	BRO family, N-terminal domain	N/A
eggNOG-mapper	UHGV-0127448_20	1443125.Z962_p0009	205.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0127448_20	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0127448_20	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0127448_20	PF02498,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_22	phrog_4608	156.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-0127448_22	UniRef90_A0A413YTH5	286.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_22	1408823.AXUS01000024_gene2689	159.0	0	ORF6C domain	N/A
Pfam	UHGV-0127448_22	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0127448_22	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
UniRef90	UHGV-0127448_23	UniRef90_A0A416L831	62.8	0.0000000000198	Toxin-antitoxin system HicB family antitoxin	N/A
structural_annotation	UHGV-0127448_23	PF16777,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_25	phrog_1535	189.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0127448_25	1211844.CBLM010000016_gene1482	213.0	0	tape measure	N/A
COG	UHGV-0127448_25	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0127448_25	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_26	phrog_14030	129.8	1.9e-38	N/A	unknown function
UniRef90	UHGV-0127448_26	UniRef90_A0A3R6ARM6	205.0	0	Peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0127448_26	1235793.C809_02691	170.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0127448_26	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
UniRef90	UHGV-0127448_29	UniRef90_A0A8D9PGN2	184.0	0	Major tail protein	N/A
structural_annotation	UHGV-0127448_29	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0127448_30	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0127448_31	1298920.KI911353_gene2654	175.0	0	N/A	N/A
AcrCatalog	UHGV-0127448_31	cluster_24841	92.4	1.38e-25	NA	N/A
structural_annotation	UHGV-0127448_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_33	phrog_18218	133.5	7.1e-40	N/A	unknown function
UniRef90	UHGV-0127448_33	UniRef90_A0A8D9PGR5	177.0	0	Holin	N/A
eggNOG-mapper	UHGV-0127448_33	411902.CLOBOL_03424	81.6	1.22e-18	N/A	N/A
PHROG	UHGV-0127448_34	phrog_1863	56.6	2.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0127448_34	742741.HMPREF9475_00442	63.2	0.0000000000163	N/A	N/A
eggNOG-mapper	UHGV-0127448_35	397290.C810_01402	62.0	0.000000000101	N/A	N/A
UniRef90	UHGV-0127448_36	UniRef90_A0A416G2T8	68.6	0.000000000000162	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0127448_36	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_37	phrog_29	159.7	0	major head protein	head and packaging
UniRef90	UHGV-0127448_37	UniRef90_A0A173UF26	722.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0127448_37	1347368.HG964404_gene4993	160.0	2.07392e-43	Phage major capsid protein E	N/A
Pfam	UHGV-0127448_37	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0127448_37	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_38	phrog_909	69.5	4.9e-20	major head protein	head and packaging
UniRef90	UHGV-0127448_38	UniRef90_R7BGI8	149.0	1.54143e-44	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0127448_38	1536772.R70723_06665	55.8	0.0000000135	N/A	N/A
UniRef90	UHGV-0127448_39	UniRef90_R6C0B6	125.0	6.1e-33	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0127448_40	phrog_64	180.1	0	portal protein	head and packaging
UniRef90	UHGV-0127448_40	UniRef90_A0A173UGW9	937.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0127448_40	1298920.KI911353_gene2663	456.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0127448_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0127448_40	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_41	phrog_36	62.2	1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0127448_41	UniRef90_A0A371AT86	75.5	0.0000000000000123	N/A	N/A
eggNOG-mapper	UHGV-0127448_41	689781.AUJX01000031_gene120	72.8	0.0000000000000245	N/A	N/A
COG	UHGV-0127448_41	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0127448_41	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_42	phrog_38	144.7	6.40393e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0127448_42	UniRef90_A0A8D9PG33	741.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0127448_42	1232453.BAIF02000058_gene1623	423.0	0	TIGRFAM Phage	N/A
COG	UHGV-0127448_42	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0127448_42	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-0127448_43	UniRef90_UPI0011072322	83.2	3.97e-18	N/A	N/A
eggNOG-mapper	UHGV-0127448_43	411473.RUMCAL_00360	72.4	0.00000000000000955	N/A	N/A
structural_annotation	UHGV-0127448_43	PF14359,COG3613	N/A	N/A	N/A	N/A
UniRef90	UHGV-0127448_47	UniRef90_A0A8D9PGN8	87.8	3.86e-21	Acetyl-coA carboxylase zinc finger domain protein	N/A
structural_annotation	UHGV-0127448_48	PF04466	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_49	phrog_28328	41.3	0.000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0127448_51	411473.RUMCAL_02525	99.4	1.75e-25	N/A	N/A
PHROG	UHGV-0127448_52	phrog_229	116.0	2.5e-34	MazG-like pyrophosphatase	other
UniRef90	UHGV-0127448_52	UniRef90_UPI001D02B1F9	275.0	0	nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-0127448_52	428125.CLOLEP_01391	104.0	3.75e-27	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0127448_52	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0127448_52	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0127448_52	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
Pfam	UHGV-0127448_53	PF10957	N/A	N/A	Sporulation protein Cse60	Spore_Cse60
structural_annotation	UHGV-0127448_53	PF10750,MF_00508,TIGR00166	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0127448_54	658655.HMPREF0988_00895	71.2	0.000000000000545	N/A	N/A
eggNOG-mapper	UHGV-0127448_55	742738.HMPREF9460_04058	77.0	0.0000000000000218	N/A	N/A
UniRef90	UHGV-0127448_59	UniRef90_UPI001D008199	159.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_59	877411.JMMA01000002_gene1483	53.5	0.0000000176	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0127448_59	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
eggNOG-mapper	UHGV-0127448_61	397290.C810_01347	50.8	0.000000104	N/A	N/A
structural_annotation	UHGV-0127448_61	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_65	phrog_1233	41.2	0.00000000003	N/A	unknown function
eggNOG-mapper	UHGV-0127448_65	658655.HMPREF0988_00914	72.0	0.00000000000000193	N/A	N/A
structural_annotation	UHGV-0127448_65	PF13058	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0127448_66	658655.HMPREF0988_00915	114.0	1.5e-28	N/A	N/A
PHROG	UHGV-0127448_67	phrog_20016	211.4	0	N/A	unknown function
UniRef90	UHGV-0127448_67	UniRef90_A0A285PT46	162.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0127448_67	397290.C810_05214	213.0	0	N/A	N/A
structural_annotation	UHGV-0127448_67	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0127448_68	phrog_16490	191.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0127448_68	397290.C810_01328	180.0	0	N/A	N/A
PHROG	UHGV-0127448_69	phrog_59	136.9	2.59997e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0127448_69	UniRef90_UPI00189871DD	166.0	0	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_69	357276.EL88_11520	157.0	1.4013e-45	HNH endonuclease domain protein	N/A
PADLOC	UHGV-0127448_69	HEase_00016	86.7	1e-26	homing endonuclease	RM
Pfam	UHGV-0127448_69	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0127448_69	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0127448_69	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-0127448_69	PF07453,TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0127448_70	658655.HMPREF0988_00918	81.6	1.45e-19	N/A	N/A
eggNOG-mapper	UHGV-0127448_71	658655.HMPREF0988_00919	89.4	2.86e-20	N/A	N/A
KOfam	UHGV-0127448_73	K03733	42.9	0.0000000000087	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0127448_73	phrog_1	53.9	0.0000000000000036	integrase	integration and excision
UniRef90	UHGV-0127448_73	UniRef90_UPI001C8BD2E0	202.0	0	phage integrase N-terminal SAM-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0127448_73	658088.HMPREF0987_01033	216.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0127448_73	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
COG	UHGV-0127448_73	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0127448_73	PF13495,MF_01808,NF001399,COG4974	N/A	N/A	N/A	N/A