UHGV-0129567 (vOTU-010397)

Viral Genome: UHGV-0129567

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0129567
vOTU ID	vOTU-010397
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_310598
Associated BioSample	SAMEA37118668
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.86 (High-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.02
Jumbo phage	No

Genome content
Genome length (bp)	37,416
GC content	37.57%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	93%
Average CDS length (bps)	697.32
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0129567_1	411469.EUBHAL_01069	87.4	3.96e-21	N/A	N/A
KOfam	UHGV-0129567_2	K14059	93.5	3.5e-27	int; integrase	N/A
PHROG	UHGV-0129567_2	phrog_1	128.7	6.4e-38	integrase	integration and excision
UniRef90	UHGV-0129567_2	UniRef90_A0A173S3V2	692.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0129567_2	742740.HMPREF9474_02388	422.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0129567_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0129567_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0129567_2	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0129567_3	UniRef90_A0A173RTG3	414.0	0	Bacterial Ig-like domain (Group 2)	N/A
eggNOG-mapper	UHGV-0129567_3	1449050.JNLE01000003_gene3872	127.0	1.03e-33	Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0129567_3	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-0129567_3	PF02368,NF005261,COG3121	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_4	phrog_87	106.4	1.6e-31	metallo-protease	other
UniRef90	UHGV-0129567_4	UniRef90_A0A173RF40	264.0	0	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-0129567_4	742740.HMPREF9474_03480	145.0	5.08671e-43	N/A	N/A
Pfam	UHGV-0129567_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0129567_4	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0129567_4	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_5	phrog_2967	60.3	3.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0129567_5	UniRef90_A0A173REI3	273.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0129567_5	742740.HMPREF9474_03481	112.0	9.35e-30	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0129567_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0129567_5	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0129567_5	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0129567_6	K22300	46.4	0.00000000000078	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0129567_6	phrog_2439	42.5	0.0000000000067	transcriptional regulator	transcription regulation
UniRef90	UHGV-0129567_6	UniRef90_A0A173RFH2	149.0	1.4013e-45	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0129567_6	1256908.HMPREF0373_00646	76.3	1.65e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0129567_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0129567_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0129567_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0129567_9	NF037954	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_10	phrog_8	44.5	0.000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-0129567_10	UniRef90_A0A1Q2C3Y4	241.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_10	748224.HMPREF9436_01450	94.7	4.14e-23	N/A	N/A
Pfam	UHGV-0129567_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0129567_10	PF01381,PF12728,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_13	phrog_3584	183.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129567_13	UniRef90_A0A1I5LZL1	192.0	0	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_13	1196322.A370_05744	204.0	0	N/A	N/A
structural_annotation	UHGV-0129567_13	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0129567_14	K03469	45.3	0.0000000000017	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0129567_14	phrog_531	40.3	0.000000000051	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129567_14	UniRef90_A0A415YC84	295.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_14	1122139.KB907863_gene1814	55.8	0.000000107	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0129567_14	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0129567_14	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0129567_14	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
UniRef90	UHGV-0129567_15	UniRef90_A0A415YC18	271.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0129567_15	1540257.JQMW01000009_gene3675	72.8	0.000000000000021	HNH nucleases	N/A
COG	UHGV-0129567_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0129567_15	COG5126	N/A	N/A	N/A	N/A
UniRef90	UHGV-0129567_16	UniRef90_UPI0015704B43	261.0	0	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0129567_16	1235793.C809_01906	77.8	5.95e-16	N/A	N/A
Pfam	UHGV-0129567_16	PF14058	N/A	N/A	PcfK-like protein	PcfK
PHROG	UHGV-0129567_17	phrog_8470	225.6	0	N/A	unknown function
UniRef90	UHGV-0129567_17	UniRef90_UPI00156DB36C	913.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_17	397288.C806_03897	131.0	2.39e-29	PcfJ-like protein	N/A
Pfam	UHGV-0129567_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0129567_17	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_18	phrog_15077	120.2	3.3e-35	N/A	unknown function
UniRef90	UHGV-0129567_18	UniRef90_A0A415YC35	720.0	0	N/A	N/A
eggNOG-mapper	UHGV-0129567_18	411459.RUMOBE_00949	173.0	0	N/A	N/A
Pfam	UHGV-0129567_18	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0129567_18	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0129567_18	PF12961,PF11300,MF_00771,NF002615,COG2411	N/A	N/A	N/A	N/A
UniRef90	UHGV-0129567_20	UniRef90_A0A415YC13	251.0	0	Transposase	N/A
Pfam	UHGV-0129567_20	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
Pfam	UHGV-0129567_20	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0129567_20	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0129567_20	PF01710,NF040595,COG3415	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_22	phrog_1672	46.6	0.00000000000025	N/A	unknown function
eggNOG-mapper	UHGV-0129567_22	632245.CLP_1632	55.5	0.0000000589	N/A	N/A
PHROG	UHGV-0129567_23	phrog_30258	119.2	1.7e-35	N/A	unknown function
PHROG	UHGV-0129567_25	phrog_36	65.3	1.2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0129567_25	UniRef90_R6ZAS5	147.0	2.24068e-42	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_25	411490.ANACAC_00789	169.0	0	N/A	N/A
structural_annotation	UHGV-0129567_25	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_26	phrog_872	69.6	5.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0129567_26	397290.C810_05225	108.0	1.43e-28	N/A	N/A
dbAPIS	UHGV-0129567_26	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_27	phrog_918	47.4	0.00000000000025	N/A	unknown function
UniRef90	UHGV-0129567_27	UniRef90_UPI00156D5D02	98.2	5.81e-25	N/A	N/A
eggNOG-mapper	UHGV-0129567_27	537007.BLAHAN_05515	89.4	2.75e-22	N/A	N/A
Pfam	UHGV-0129567_27	PF19791	N/A	N/A	N/A	DUF6275
PHROG	UHGV-0129567_28	phrog_478	127.8	4e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0129567_28	UniRef90_A0A285PT53	194.0	0	Prokaryotic membrane lipoprotein lipid attachment site profile	N/A
eggNOG-mapper	UHGV-0129567_28	397290.C810_00409	186.0	0	N/A	N/A
KOfam	UHGV-0129567_29	K07474	147.1	2.00386e-43	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0129567_29	phrog_51	159.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0129567_29	UniRef90_UPI00156DD68E	318.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0129567_29	1304866.K413DRAFT_0812	215.0	0	Terminase small subunit	N/A
Pfam	UHGV-0129567_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0129567_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0129567_29	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0129567_30	K06909	102.0	6.9e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0129567_30	phrog_10250	55.4	2.6e-16	N/A	unknown function
UniRef90	UHGV-0129567_30	UniRef90_A0A417V8L6	919.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0129567_30	1304866.K413DRAFT_0811	746.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0129567_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0129567_30	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_31	phrog_533	275.7	0	portal protein	head and packaging
UniRef90	UHGV-0129567_31	UniRef90_A0A417V837	1074.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0129567_31	33035.JPJF01000093_gene2257	594.0	0	N/A	N/A
structural_annotation	UHGV-0129567_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0129567_32	K11044	46.0	1.6e-17	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-0129567_32	phrog_581	253.7	0	minor head protein	head and packaging
UniRef90	UHGV-0129567_32	UniRef90_A0A417V7Z4	1066.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0129567_32	33035.JPJF01000093_gene2255	674.0	0	N/A	N/A
Pfam	UHGV-0129567_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0129567_32	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0129567_32	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0129567_32	PF06152,PF01129,NF041404	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0129567_34	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_35	phrog_2303	145.3	4.1058e-43	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0129567_35	742740.HMPREF9474_03504	178.0	0	N/A	N/A
PHROG	UHGV-0129567_36	phrog_422	270.1	0	major head protein	head and packaging
UniRef90	UHGV-0129567_36	UniRef90_A0A417V845	633.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0129567_36	663278.Ethha_1589	409.0	0	N/A	N/A
structural_annotation	UHGV-0129567_36	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_37	phrog_541	70.0	3e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0129567_37	1298920.KI911353_gene4848	133.0	1.41e-38	N/A	N/A
PHROG	UHGV-0129567_38	phrog_8710	144.5	2.49431e-43	N/A	unknown function
eggNOG-mapper	UHGV-0129567_38	742740.HMPREF9474_03508	143.0	4.9606e-43	N/A	N/A
structural_annotation	UHGV-0129567_38	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_39	phrog_556	56.4	5.1e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0129567_39	742740.HMPREF9474_03509	159.0	0	N/A	N/A
PHROG	UHGV-0129567_40	phrog_2595	103.2	1.9e-30	head-tail connector protein	connector
UniRef90	UHGV-0129567_40	UniRef90_UPI001D0627B3	201.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0129567_40	679192.HMPREF9013_1297	141.0	1.79002e-41	N/A	N/A
Pfam	UHGV-0129567_40	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0129567_40	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_41	phrog_820	123.6	1e-36	major tail protein	tail
eggNOG-mapper	UHGV-0129567_41	1282664.H354_06691	199.0	0	N/A	N/A
structural_annotation	UHGV-0129567_41	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_42	phrog_8300	92.0	4.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0129567_42	33035.JPJF01000093_gene2245	102.0	6.05e-27	N/A	N/A
structural_annotation	UHGV-0129567_42	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_43	phrog_8355	100.6	5.5e-30	N/A	unknown function
UniRef90	UHGV-0129567_43	UniRef90_UPI001D0684E3	125.0	1.09e-35	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0129567_43	33035.JPJF01000093_gene2244	94.0	2.6e-24	N/A	N/A
PHROG	UHGV-0129567_44	phrog_1535	254.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0129567_44	UniRef90_A0A1C5PIN9	512.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0129567_44	742740.HMPREF9474_03514	403.0	0	tape measure	N/A
COG	UHGV-0129567_44	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0129567_44	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_45	phrog_1194	83.2	2.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0129567_45	33035.JPJF01000093_gene2242	126.0	5.08e-36	N/A	N/A
structural_annotation	UHGV-0129567_45	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_46	phrog_1401	51.6	0.000000000000016	N/A	unknown function
structural_annotation	UHGV-0129567_46	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_47	phrog_16267	205.4	0	N/A	unknown function
UniRef90	UHGV-0129567_47	UniRef90_A0A417V835	1518.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_47	1294142.CINTURNW_1706	217.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0129567_47	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
Pfam	UHGV-0129567_47	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0129567_47	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0129567_48	phrog_2566	77.6	1.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0129567_48	1232453.BAIF02000058_gene1639	62.0	0.00000000000974	N/A	N/A
PHROG	UHGV-0129567_49	phrog_199	70.8	1.6e-20	holin	lysis
UniRef90	UHGV-0129567_49	UniRef90_A0A417V866	301.0	0	Holin	N/A
eggNOG-mapper	UHGV-0129567_49	411462.DORLON_00766	186.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0129567_49	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0129567_49	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0129567_49	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0129567_49	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0129567_50	phrog_21357	122.0	3.7e-36	endolysin	lysis
UniRef90	UHGV-0129567_50	UniRef90_A0A417V8P8	462.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0129567_50	693746.OBV_19030	154.0	7.56701e-44	CHAP domain	N/A
Pfam	UHGV-0129567_50	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0129567_50	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0129567_50	PF01471,PF00877,TIGR02594,TIGR03979,COG3942	N/A	N/A	N/A	N/A