UHGV-0130761 (vOTU-017050)

Viral Genome: UHGV-0130761

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0130761
vOTU ID	vOTU-017050
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_387510
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.3 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9783
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.55
Jumbo phage	No

Genome content
Genome length (bp)	48,017
GC content	46.70%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	96%
Average CDS length (bps)	767.75
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0130761_1	phrog_270	41.2	0.00000000003	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0130761_1	945021.TEH_18370	53.5	0.000000312	Helix-turn-helix domain	N/A
COG	UHGV-0130761_1	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
PHROG	UHGV-0130761_2	phrog_9804	103.6	1.9e-30	N/A	unknown function
UniRef90	UHGV-0130761_2	UniRef90_R6LQQ5	114.0	1.33e-28	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0130761_2	1499683.CCFF01000013_gene503	83.2	3.26e-17	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0130761_2	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0130761_2	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0130761_8	K01520	138.4	5.49996e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0130761_8	phrog_135	118.3	5.2e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130761_8	UniRef90_R6ILQ3	149.0	1.16308e-43	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0130761_8	1282887.AUJG01000016_gene1113	144.0	1.84005e-41	N/A	N/A
Pfam	UHGV-0130761_8	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0130761_8	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0130761_8	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0130761_8	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-0130761_9	UniRef90_A0A098GES5	97.8	4.33e-24	Putative phage associated protein	N/A
structural_annotation	UHGV-0130761_9	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0130761_11	PF13969	N/A	N/A	N/A	N/A
KOfam	UHGV-0130761_12	K00558	171.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0130761_12	phrog_116	200.8	0	DNA methyltransferase	other
UniRef90	UHGV-0130761_12	UniRef90_A0A410PTN3	432.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0130761_12	693746.OBV_41630	369.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0130761_12	oMTase_00004	262.6	0	orphan methyltransferase	RM
Pfam	UHGV-0130761_12	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0130761_12	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0130761_12	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0130761_12	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0130761_14	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_15	phrog_7314	44.9	0.0000000000019	N/A	unknown function
KOfam	UHGV-0130761_16	K07451	55.3	1.9e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0130761_16	phrog_1271	68.7	1.3e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130761_16	UniRef90_U4R634	147.0	1.53022e-42	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0130761_16	394503.Ccel_3167	150.0	2.24208e-44	N/A	N/A
Pfam	UHGV-0130761_16	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-0130761_16	PF01844,NF008448,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_18	phrog_22543	43.2	0.0000000000049	N/A	unknown function
Pfam	UHGV-0130761_18	PF09297	N/A	N/A	NADH pyrophosphatase zinc ribbon domain	zf-NADH-PPase
PHROG	UHGV-0130761_21	phrog_478	130.9	4.3e-39	site-specific recombination directionality factor RDF	integration and excision
eggNOG-mapper	UHGV-0130761_21	1111121.HMPREF1247_0834	116.0	1.09e-31	N/A	N/A
KOfam	UHGV-0130761_23	K03111	135.5	6.2e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0130761_23	phrog_44	136.5	1.7e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130761_23	UniRef90_R6TSJ9	165.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0130761_23	445972.ANACOL_04434	125.0	8.93e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0130761_23	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0130761_23	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0130761_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0130761_23	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0130761_23	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_24	phrog_4632	49.9	0.0000000000000015	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130761_24	UniRef90_A0A1V5ZUM0	102.0	2.36e-25	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0130761_24	469604.HMPREF0946_00819	68.6	0.000000000000356	N/A	N/A
structural_annotation	UHGV-0130761_24	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_25	phrog_474	79.1	9.3e-23	phosphofructokinase	other
UniRef90	UHGV-0130761_25	UniRef90_UPI00195F5FF7	100.0	2.01e-25	N/A	N/A
eggNOG-mapper	UHGV-0130761_25	1095750.HMPREF9970_1026	74.3	8.71e-16	N/A	N/A
Pfam	UHGV-0130761_25	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0130761_25	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0130761_27	K03111	118.2	1.1e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0130761_27	phrog_44	117.9	9.4e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130761_27	UniRef90_A0A7C6GL00	149.0	1.75162e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0130761_27	1232443.BAIA02000073_gene513	116.0	1.47e-31	Single-strand binding protein family	N/A
Pfam	UHGV-0130761_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0130761_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0130761_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0130761_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0130761_27	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_30	phrog_10089	1328.0	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0130761_30	UniRef90_A0A3D0X8D0	1283.0	0	Helicase ATP-binding domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0130761_30	397288.C806_03713	958.0	0	helicase C-terminal domain protein	N/A
PADLOC	UHGV-0130761_30	DrmD_00004	40.2	0.00000000005	DrmD	DISARM
Pfam	UHGV-0130761_30	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0130761_30	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0130761_30	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-0130761_30	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0130761_30	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
KOfam	UHGV-0130761_31	K14059	166.3	0	int; integrase	N/A
PHROG	UHGV-0130761_31	phrog_1	148.8	4.34403e-44	integrase	integration and excision
UniRef90	UHGV-0130761_31	UniRef90_A0A6N7W462	190.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0130761_31	887325.HMPREF0381_0346	172.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0130761_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0130761_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0130761_31	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0130761_32	1408437.JNJN01000043_gene801	90.1	2.95e-20	N/A	N/A
structural_annotation	UHGV-0130761_34	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0130761_37	1121334.KB911071_gene1966	55.1	0.00000000607	N/A	N/A
KOfam	UHGV-0130761_39	K19304	100.0	2.9e-29	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0130761_39	phrog_7767	92.2	3.6e-27	metallo-endopeptidase	other
UniRef90	UHGV-0130761_39	UniRef90_A0A1E1VI95	80.9	0.00000000000008	Muramidase	N/A
eggNOG-mapper	UHGV-0130761_39	1158601.I585_02846	95.9	2.22e-18	Peptidase family M23	N/A
Pfam	UHGV-0130761_39	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0130761_39	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0130761_39	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0130761_39	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_40	phrog_4105	96.1	2.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-0130761_40	397288.C806_00056	93.6	2.44e-23	N/A	N/A
PHROG	UHGV-0130761_42	phrog_13589	51.3	3.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0130761_42	411471.SUBVAR_06929	263.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0130761_42	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0130761_44	phrog_19111	71.2	6.2e-21	N/A	unknown function
COG	UHGV-0130761_45	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0130761_45	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0130761_48	1449126.JQKL01000002_gene1688	77.0	0.0000000000031	N/A	N/A
structural_annotation	UHGV-0130761_48	PF11134,MF_00923,NF010237,NF038128,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0130761_49	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_51	phrog_14242	114.6	6.6e-34	major head protein	head and packaging
UniRef90	UHGV-0130761_51	UniRef90_A0A355JD53	277.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0130761_51	588581.Cpap_1528	140.0	8.4e-35	N/A	N/A
NCBIFam	UHGV-0130761_51	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0130761_51	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_53	phrog_156	84.9	1e-26	portal protein	head and packaging
eggNOG-mapper	UHGV-0130761_53	588581.Cpap_1526	233.0	0	N/A	N/A
structural_annotation	UHGV-0130761_53	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_56	phrog_28563	40.8	0.00000000003	N/A	unknown function
UniRef90	UHGV-0130761_56	UniRef90_A0A0M9D4G0	68.9	0.000000000000114	INTEIN_C_TER domain-containing protein	N/A
NCBIFam	UHGV-0130761_56	TIGR01443.1	N/A	N/A	intein C-terminal splicing region	N/A
PHROG	UHGV-0130761_57	phrog_15471	123.5	3.2e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130761_57	UniRef90_A0A3F2ZSG9	171.0	0	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-0130761_57	1235800.C819_00490	129.0	3.29e-34	HNH endonuclease	N/A
Pfam	UHGV-0130761_57	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0130761_57	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
KOfam	UHGV-0130761_58	K06909	285.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0130761_58	phrog_3717	199.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0130761_58	UniRef90_A0A3S1ABC6	466.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0130761_58	696281.Desru_1088	428.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0130761_58	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0130761_58	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0130761_58	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0130761_58	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0130761_59	phrog_606	52.8	0.0000000000000062	terminase small subunit	head and packaging
Pfam	UHGV-0130761_59	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0130761_59	PF16677	N/A	N/A	N/A	N/A