UHGV-0130783 (vOTU-143268)

Viral Genome: UHGV-0130783

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0130783
vOTU ID	vOTU-143268
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_356544
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	78.27 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	31
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9802
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.42
Jumbo phage	No

Genome content
Genome length (bp)	26,057
GC content	40.34%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	94%
Average CDS length (bps)	681.92
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0130783_1	phrog_7445	185.9	0	N/A	unknown function
UniRef90	UHGV-0130783_1	UniRef90_Q7Y4K2	287.0	0	Gp22	N/A
eggNOG-mapper	UHGV-0130783_1	157924.Q7Y4K2_9CAUD	287.0	0	PcfK-like protein	N/A
Pfam	UHGV-0130783_1	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0130783_1	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_2	phrog_7484	716.2	0	N/A	unknown function
UniRef90	UHGV-0130783_2	UniRef90_Q7Y4K1	766.0	0	Gp23	N/A
eggNOG-mapper	UHGV-0130783_2	997830.HMPREF1124_0583	846.0	0	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0130783_2	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0130783_2	PF14284	N/A	N/A	N/A	N/A
KOfam	UHGV-0130783_3	K22300	54.1	0.0000000000000037	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0130783_3	phrog_8	69.4	7.1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0130783_3	UniRef90_A0A139R8H2	261.0	0	Phage DNA-binding protein	N/A
eggNOG-mapper	UHGV-0130783_3	1123308.KB904555_gene919	92.0	7.41e-22	Transcriptional	N/A
Pfam	UHGV-0130783_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0130783_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0130783_3	PF12844,MF_00535,NF041575,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_4	phrog_121	113.9	2.6e-34	N/A	unknown function
UniRef90	UHGV-0130783_4	UniRef90_UPI00066D5CFD	310.0	0	N/A	N/A
eggNOG-mapper	UHGV-0130783_4	1282664.H354_07590	162.0	0	N/A	N/A
Pfam	UHGV-0130783_4	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-0130783_4	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_5	phrog_2003	176.4	0	N/A	unknown function
UniRef90	UHGV-0130783_5	UniRef90_UPI000AB188AB	140.0	6.86006e-41	N/A	N/A
PHROG	UHGV-0130783_6	phrog_20205	124.9	1.9e-37	N/A	unknown function
PHROG	UHGV-0130783_7	phrog_884	102.5	2.2e-30	N/A	unknown function
UniRef90	UHGV-0130783_7	UniRef90_W1USP4	157.0	0	Gp27 family protein	N/A
eggNOG-mapper	UHGV-0130783_7	768726.HMPREF9178_1075	119.0	1.09e-32	N/A	N/A
Pfam	UHGV-0130783_7	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-0130783_7	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_8	phrog_7626	144.3	1.79366e-43	N/A	unknown function
PHROG	UHGV-0130783_9	phrog_36	78.6	9.2e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0130783_9	UniRef90_E6KKC4	253.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-0130783_9	1008453.HMPREF9957_0709	87.0	4.2e-20	N/A	N/A
NCBIFam	UHGV-0130783_9	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0130783_9	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0130783_10	K04763	103.9	2e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0130783_10	phrog_216	185.5	0	integrase	integration and excision
UniRef90	UHGV-0130783_10	UniRef90_A0A4D6B299	358.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-0130783_10	888049.HMPREF8578_0690	357.0	0	Integrase	N/A
Pfam	UHGV-0130783_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0130783_10	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0130783_10	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_12	phrog_119	69.4	5.3e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0130783_12	UniRef90_A0A081R3F3	234.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-0130783_12	644007.C5J957_9CAUD	226.0	0	endonuclease activity	N/A
PHROG	UHGV-0130783_13	phrog_361	154.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-0130783_13	UniRef90_A0A414CIM9	226.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-0130783_13	1005705.HMPREF9967_1038	250.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0130783_13	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0130783_13	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0130783_13	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_14	phrog_9	346.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0130783_14	UniRef90_A0A7G1IQ86	1090.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0130783_14	888049.HMPREF8578_0694	1143.0	0	Terminase	N/A
Pfam	UHGV-0130783_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0130783_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0130783_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0130783_14	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_15	phrog_12	187.9	0	portal protein	head and packaging
UniRef90	UHGV-0130783_15	UniRef90_UPI001CBC02E6	724.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0130783_15	644007.C5J961_9CAUD	775.0	0	Phage portal protein	N/A
Pfam	UHGV-0130783_15	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0130783_15	TIGR01537.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0130783_15	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0130783_16	K06904	133.9	1.6e-39	N/A	N/A
PHROG	UHGV-0130783_16	phrog_80	169.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0130783_16	UniRef90_A0A098ANM2	363.0	0	Bacteriophage maturation protease	N/A
eggNOG-mapper	UHGV-0130783_16	1005705.HMPREF9967_1041	340.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0130783_16	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0130783_16	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0130783_16	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0130783_16	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_17	phrog_10	182.6	0	major head protein	head and packaging
UniRef90	UHGV-0130783_17	UniRef90_A0A1X0X1F5	644.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0130783_17	644007.C5J963_9CAUD	616.0	0	peptidase activity	N/A
Pfam	UHGV-0130783_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0130783_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0130783_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_18	phrog_390	91.4	6.9e-27	Arc-like repressor	transcription regulation
UniRef90	UHGV-0130783_18	UniRef90_A0A0P0N6K2	88.2	8.72e-21	Phage transcriptional terminator	N/A
eggNOG-mapper	UHGV-0130783_18	1405498.SSIM_04855	50.4	0.00000082	Rho termination factor, N-terminal domain	N/A
PHROG	UHGV-0130783_19	phrog_2550	142.1	6.40393e-43	N/A	unknown function
UniRef90	UHGV-0130783_19	UniRef90_A0A081R3E6	181.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-0130783_19	644007.C5J965_9CAUD	181.0	0	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-0130783_19	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_20	phrog_1951	136.5	5.70006e-41	head-tail adaptor	connector
UniRef90	UHGV-0130783_20	UniRef90_UPI000B58A5F0	182.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-0130783_20	888049.HMPREF8578_0701	192.0	0	head-tail adaptor	N/A
NCBIFam	UHGV-0130783_20	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0130783_20	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0130783_20	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_21	phrog_5	46.1	0.0000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0130783_21	UniRef90_A0A098ANM6	203.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-0130783_21	644007.C5J967_9CAUD	203.0	0	exonuclease activity	N/A
Pfam	UHGV-0130783_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0130783_21	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_22	phrog_78	51.3	0.000000000000025	tail terminator	connector
UniRef90	UHGV-0130783_22	UniRef90_T0U477	153.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-0130783_22	644007.C5J968_9CAUD	209.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-0130783_22	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_23	phrog_88	162.5	0	major tail protein	tail
UniRef90	UHGV-0130783_23	UniRef90_F5W033	330.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0130783_23	644007.C5J969_9CAUD	389.0	0	N/A	N/A
NCBIFam	UHGV-0130783_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0130783_23	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_24	phrog_709	148.3	2.10195e-44	N/A	unknown function
UniRef90	UHGV-0130783_24	UniRef90_A0A0E4CSV4	185.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-0130783_24	888049.HMPREF8578_0705	273.0	0	N/A	N/A
structural_annotation	UHGV-0130783_24	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_25	phrog_58	281.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0130783_25	UniRef90_A0A0F3HL36	1063.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-0130783_25	888049.HMPREF8578_0706	1077.0	0	Phage tail tape measure protein	N/A
COG	UHGV-0130783_25	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0130783_25	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_26	phrog_33	55.5	2.9e-16	distal tail protein Dit	tail
UniRef90	UHGV-0130783_26	UniRef90_A0A1F0TGE5	441.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0130783_26	888049.HMPREF8578_0707	458.0	0	N/A	N/A
structural_annotation	UHGV-0130783_26	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_27	phrog_1210	698.7	0	PblB-type receptor binding	other
UniRef90	UHGV-0130783_27	UniRef90_UPI0009F3A55A	1550.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0130783_27	1297534.CAUJ01000005_gene170	1253.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0130783_27	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0130783_27	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0130783_27	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0130783_27	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_28	phrog_12683	84.1	1.2e-24	N/A	unknown function
PHROG	UHGV-0130783_29	phrog_1554	214.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0130783_29	1095737.HMPREF1110_1749	204.0	0	N/A	N/A
structural_annotation	UHGV-0130783_29	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_30	phrog_4257	129.0	2.2e-38	N/A	unknown function
UniRef90	UHGV-0130783_30	UniRef90_F9PZ52	109.0	8.43e-28	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0130783_30	1035189.HMPREF9954_0324	109.0	1.41e-28	N/A	N/A
PHROG	UHGV-0130783_31	phrog_6487	183.6	0	N/A	unknown function
UniRef90	UHGV-0130783_31	UniRef90_A0A0U0KNR2	264.0	0	N/A	N/A
eggNOG-mapper	UHGV-0130783_31	365659.smi_0474	179.0	0	N/A	N/A
structural_annotation	UHGV-0130783_31	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
UniRef90	UHGV-0130783_32	UniRef90_A0A150NVR4	164.0	0	N/A	N/A
UniRef90	UHGV-0130783_33	UniRef90_A0A139PUB3	149.0	6.46994e-41	N/A	N/A
PHROG	UHGV-0130783_34	phrog_10091	87.1	1.8e-25	holin	lysis
UniRef90	UHGV-0130783_34	UniRef90_Q708K1	168.0	0	Holin	N/A
eggNOG-mapper	UHGV-0130783_34	428127.EUBDOL_01206	109.0	3.45e-30	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0130783_34	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0130783_34	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0130783_34	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0130783_34	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-0130783_35	K07273	102.9	3.5e-30	acm; lysozyme	N/A
PHROG	UHGV-0130783_35	phrog_6745	351.5	0	endolysin	lysis
UniRef90	UHGV-0130783_35	UniRef90_F9PY40	517.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0130783_35	1297534.CAUJ01000005_gene165	529.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0130783_35	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0130783_35	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
Pfam	UHGV-0130783_35	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0130783_35	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0130783_35	PF01183,PF19127,TIGR04035,COG5263,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0130783_36	phrog_1529	61.1	2.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0130783_36	638301.HMPREF0444_1489	55.1	0.00000000197	N/A	N/A
structural_annotation	UHGV-0130783_36	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A