UHGV-0131325 (vOTU-168661)

Viral Genome: UHGV-0131325

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0131325
vOTU ID	vOTU-168661
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_392114
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.26 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9665
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.74
Jumbo phage	No

Genome content
Genome length (bp)	20,452
GC content	38.86%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	83%
Average CDS length (bps)	566.10
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0131325_1	UniRef90_A0A401LF18	79.3	6.05e-18	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0131325_1	1121289.JHVL01000006_gene2897	54.7	0.00000000485	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0131325_1	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0131325_1	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0131325_4	UniRef90_A0A4S2HFY1	54.3	0.0000000246	N/A	N/A
eggNOG-mapper	UHGV-0131325_4	397288.C806_01227	57.0	0.000000000317	N/A	N/A
PHROG	UHGV-0131325_5	phrog_36702	80.1	3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0131325_5	397290.C810_01700	108.0	9.77e-25	N/A	N/A
KOfam	UHGV-0131325_6	K06909	194.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0131325_6	phrog_5653	149.3	1.68156e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0131325_6	UniRef90_A0A0X8VB17	415.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0131325_6	86416.Clopa_1892	222.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0131325_6	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0131325_6	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0131325_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0131325_6	PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_7	phrog_64	244.0	0	portal protein	head and packaging
UniRef90	UHGV-0131325_7	UniRef90_A0A0X8VAZ7	462.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0131325_7	642492.Clole_0968	162.0	9.94922e-44	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0131325_7	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0131325_7	PF05133,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_8	phrog_115	122.7	3.2e-36	minor head protein	head and packaging
UniRef90	UHGV-0131325_8	UniRef90_A0A0X8VEJ5	310.0	0	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-0131325_8	642492.Clole_0969	155.0	1.1911e-43	cell adhesion	N/A
COG	UHGV-0131325_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0131325_8	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_9	phrog_172	83.1	5e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-0131325_9	UniRef90_UPI00085C378A	156.0	4.2039e-45	N/A	N/A
eggNOG-mapper	UHGV-0131325_9	1071400.LBUCD034_0949	58.2	0.0000000837	N/A	N/A
Pfam	UHGV-0131325_9	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0131325_9	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_10	phrog_544	82.0	8.7e-24	major head protein	head and packaging
UniRef90	UHGV-0131325_10	UniRef90_A0A6N3FT63	249.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0131325_10	642492.Clole_0972	340.0	0	N/A	N/A
structural_annotation	UHGV-0131325_10	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0131325_12	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0131325_13	UniRef90_UPI00085CD908	91.3	8.46e-22	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0131325_13	768710.DesyoDRAFT_3136	55.1	0.0000000179	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0131325_13	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0131325_14	PF06141,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_15	phrog_2175	94.0	1.6e-27	protein with Ig domain	other
eggNOG-mapper	UHGV-0131325_15	1219626.HMPREF1639_07450	230.0	0	N/A	N/A
structural_annotation	UHGV-0131325_15	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_17	phrog_1272	334.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0131325_17	UniRef90_A0A0X1U6Z5	751.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0131325_17	642492.Clole_1867	320.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0131325_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0131325_17	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0131325_18	phrog_33	105.5	8.8e-31	distal tail protein Dit	tail
UniRef90	UHGV-0131325_18	UniRef90_A0A350TW29	471.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0131325_18	545697.HMPREF0216_00910	182.0	0	tail component	N/A
COG	UHGV-0131325_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0131325_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_19	phrog_3639	58.3	1e-16	minor tail protein	tail
UniRef90	UHGV-0131325_19	UniRef90_A0A396NMY3	847.0	0	N/A	N/A
Pfam	UHGV-0131325_19	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0131325_19	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-0131325_19	PF10651,PF05475,NF033675,COG4935	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0131325_21	1203606.HMPREF1526_01926	75.5	0.0000000000000167	N/A	N/A
PHROG	UHGV-0131325_22	phrog_1067	274.8	0	minor head protein	head and packaging
UniRef90	UHGV-0131325_22	UniRef90_A0A396NSB6	704.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0131325_22	1443125.Z962_07985	223.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0131325_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0131325_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0131325_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0131325_22	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0131325_23	phrog_937	52.2	0.000000000000011	hemolysin	other
eggNOG-mapper	UHGV-0131325_23	1519439.JPJG01000023_gene533	68.9	0.000000000000054	N/A	N/A
PHROG	UHGV-0131325_25	phrog_36029	134.5	5.5e-40	N/A	unknown function
UniRef90	UHGV-0131325_25	UniRef90_A0A318KD97	108.0	3.12e-28	Superfamily 6 holin (LLH)	N/A
eggNOG-mapper	UHGV-0131325_25	411468.CLOSCI_01511	129.0	2.9e-37	N/A	N/A
KOfam	UHGV-0131325_26	K21471	50.0	0.000000000000076	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0131325_26	UniRef90_A0A0X8VCT6	263.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0131325_26	411902.CLOBOL_04837	103.0	7.24e-23	Phage lysozyme	N/A
COG	UHGV-0131325_26	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0131325_26	PF00877,PF01471,NF033743,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0131325_27	515620.EUBELI_20304	212.0	0	N/A	N/A
UniRef90	UHGV-0131325_28	UniRef90_A0A3R6T240	103.0	6.29e-27	N/A	N/A
Pfam	UHGV-0131325_28	PF14213	N/A	N/A	N/A	DUF4325
structural_annotation	UHGV-0131325_28	PF14213	N/A	N/A	N/A	N/A
UniRef90	UHGV-0131325_30	UniRef90_R6Q1K9	117.0	4.92e-33	Polysaccharide deacetylase PdaB family	N/A
eggNOG-mapper	UHGV-0131325_30	97138.C820_00519	117.0	1.29e-32	Polysaccharide deacetylase	N/A
COG	UHGV-0131325_30	COG0726	N/A	N/A	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	N/A