UHGV-0132547 (vOTU-095731)

Viral Genome: UHGV-0132547

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0132547
vOTU ID	vOTU-095731
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_384158
Associated BioSample	SAMN04209227
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.53 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.973
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.03
Jumbo phage	No

Genome content
Genome length (bp)	19,701
GC content	42.51%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	38
CDS density	94%
Average CDS length (bps)	488.29
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0132547_1	UniRef90_UPI00189A61B2	160.0	0	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0132547_1	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0132547_1	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_2	phrog_15198	50.0	0.000000000000053	N/A	unknown function
UniRef90	UHGV-0132547_2	UniRef90_A0A416VUN0	54.3	0.000000334	N/A	N/A
Pfam	UHGV-0132547_2	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0132547_2	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_3	phrog_17690	91.3	8.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0132547_3	665950.HMPREF1025_02546	108.0	9.46e-30	N/A	N/A
PHROG	UHGV-0132547_4	phrog_17690	59.8	4.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0132547_4	665950.HMPREF1025_02546	59.3	0.000000000107	N/A	N/A
PHROG	UHGV-0132547_5	phrog_25456	56.2	2.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0132547_6	457412.RSAG_01159	261.0	0	N/A	N/A
structural_annotation	UHGV-0132547_8	PF09889,MF_00649,COG4068	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_9	K04763	215.1	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0132547_9	phrog_1	171.7	0	integrase	integration and excision
UniRef90	UHGV-0132547_9	UniRef90_A0A3D2TUS5	351.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0132547_9	1514668.JOOA01000001_gene378	201.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0132547_9	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0132547_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0132547_9	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0132547_9	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_10	phrog_7566	105.0	3.3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0132547_10	665950.HMPREF1025_02547	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-0132547_11	1196322.A370_05726	62.0	0.000000000019	N/A	N/A
PHROG	UHGV-0132547_12	phrog_15077	94.8	1.7e-27	N/A	unknown function
UniRef90	UHGV-0132547_12	UniRef90_A0A3A6HZA9	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-0132547_12	1280698.AUJS01000007_gene1019	403.0	0	N/A	N/A
structural_annotation	UHGV-0132547_12	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_13	phrog_8470	227.4	0	N/A	unknown function
UniRef90	UHGV-0132547_13	UniRef90_UPI001C01E393	586.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0132547_13	1280698.AUJS01000007_gene1018	841.0	0	N/A	N/A
Pfam	UHGV-0132547_13	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0132547_13	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_14	phrog_4433	71.3	2.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0132547_14	1280698.AUJS01000007_gene1017	214.0	0	N/A	N/A
structural_annotation	UHGV-0132547_14	PF12120,NF000066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0132547_15	1280698.AUJS01000007_gene1016	212.0	0	N/A	N/A
KOfam	UHGV-0132547_16	K03469	55.4	0.0000000000000013	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0132547_16	phrog_531	71.7	1.2e-20	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0132547_16	UniRef90_A0A373MPV2	231.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-0132547_16	665950.HMPREF1025_02551	165.0	0	RNase H	N/A
Pfam	UHGV-0132547_16	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0132547_16	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0132547_16	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_17	phrog_3584	148.6	3.64338e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0132547_17	665950.HMPREF1025_02552	292.0	0	N/A	N/A
structural_annotation	UHGV-0132547_17	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_19	K14059	184.0	0	int; integrase	N/A
PHROG	UHGV-0132547_19	phrog_1	186.7	0	integrase	integration and excision
UniRef90	UHGV-0132547_19	UniRef90_R9LR72	317.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0132547_19	1235796.C815_01058	317.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0132547_19	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0132547_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0132547_19	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0132547_19	PF00589,PF14659,MF_02055,NF001399,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_20	K03427	48.2	0.00000000000014	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0132547_20	phrog_5696	199.7	0	N/A	unknown function
UniRef90	UHGV-0132547_20	UniRef90_A0A1C5WE14	256.0	0	Type I restriction-modification system methyltransferase subunit	N/A
eggNOG-mapper	UHGV-0132547_20	1335760.ASTG01000023_gene576	122.0	5.22e-31	N-6 DNA Methylase	N/A
PADLOC	UHGV-0132547_20	MTase_I_00005	40.5	0.000000000035	Type I methyltransferase	RM
Pfam	UHGV-0132547_20	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0132547_20	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0132547_20	COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_25	phrog_1305	123.1	2e-36	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0132547_25	UniRef90_UPI00156EDECA	238.0	0	N/A	N/A
eggNOG-mapper	UHGV-0132547_25	445974.CLORAM_02962	152.0	5.54914e-43	N/A	N/A
structural_annotation	UHGV-0132547_25	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_28	phrog_750	92.9	2.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0132547_28	1231377.C426_1696	77.4	5e-17	N/A	N/A
structural_annotation	UHGV-0132547_28	PF13835,NF040858	N/A	N/A	N/A	N/A
UniRef90	UHGV-0132547_29	UniRef90_A0A414UVZ4	48.1	0.0000076	Aspartate ammonia-lyase	N/A
structural_annotation	UHGV-0132547_29	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_30	phrog_585	94.7	9.7e-28	N/A	unknown function
UniRef90	UHGV-0132547_30	UniRef90_A0A7G9G8R3	130.0	2.37e-36	N/A	N/A
eggNOG-mapper	UHGV-0132547_30	411465.PEPMIC_00712	85.5	1.21e-19	N/A	N/A
Pfam	UHGV-0132547_30	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0132547_30	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_33	K18830	74.2	1.3e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0132547_33	phrog_8	54.8	0.0000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-0132547_33	UniRef90_A0A3E4LWU1	211.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0132547_33	445972.ANACOL_03315	137.0	1.79e-40	N/A	N/A
Pfam	UHGV-0132547_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0132547_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0132547_33	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_35	K23779	44.7	0.0000000000031	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
UniRef90	UHGV-0132547_35	UniRef90_UPI000E486504	99.8	4.8e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0132547_35	1280698.AUJS01000007_gene1001	77.0	7.91e-18	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0132547_35	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0132547_35	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_36	K14623	375.2	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-0132547_36	phrog_8036	394.6	0	N/A	unknown function
UniRef90	UHGV-0132547_36	UniRef90_UPI000E4D3CCF	560.0	0	DNA damage-inducible protein D	N/A
eggNOG-mapper	UHGV-0132547_36	411461.DORFOR_00036	417.0	0	BRO family, N-terminal domain	N/A
AcrCatalog	UHGV-0132547_36	cluster_17589	154.0	0	NA	N/A
PADLOC	UHGV-0132547_36	Specificity_I_00032	377.4	0	Type I specificity subunit	RM
Pfam	UHGV-0132547_36	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-0132547_36	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-0132547_36	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0132547_36	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0132547_37	K06400	367.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0132547_37	phrog_95	377.2	0	integrase	integration and excision
UniRef90	UHGV-0132547_37	UniRef90_A5KP69	758.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0132547_37	411460.RUMTOR_02053	758.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0132547_37	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0132547_37	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0132547_37	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0132547_37	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0132547_37	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0132547_38	phrog_28785	170.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0132547_38	471875.RUMLAC_01973	160.0	1.4013e-45	peptidoglycan binding domain protein	N/A
COG	UHGV-0132547_38	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A