UHGV-0137878 (vOTU-032164)

Viral Genome: UHGV-0137878

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0137878
vOTU ID	vOTU-032164
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_371038
Associated BioSample	SAMN03295832
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.5 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9713
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.51
Jumbo phage	No

Genome content
Genome length (bp)	25,831
GC content	29.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	87%
Average CDS length (bps)	608.11
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0137878_2	UniRef90_A0A7X6XBW6	644.0	0	TFIIB-type zinc ribbon-containing protein	N/A
eggNOG-mapper	UHGV-0137878_2	546269.HMPREF0389_01375	556.0	0	bacterial-type flagellum-dependent swarming motility	N/A
COG	UHGV-0137878_2	COG1645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137878_3	UniRef90_A0A7C6MKH0	626.0	0	SPFH domain-containing protein	N/A
eggNOG-mapper	UHGV-0137878_3	1118059.CAHC01000001_gene617	580.0	0	SPFH domain-Band 7 family	N/A
Pfam	UHGV-0137878_3	PF13421	N/A	N/A	SPFH domain-Band 7 family	Band_7_1
Pfam	UHGV-0137878_3	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
COG	UHGV-0137878_3	COG4260	N/A	N/A	Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain	N/A
UniRef90	UHGV-0137878_4	UniRef90_UPI00082B8CF9	112.0	3.79e-31	N/A	N/A
eggNOG-mapper	UHGV-0137878_5	457396.CSBG_01065	63.5	0.000000000000535	N/A	N/A
UniRef90	UHGV-0137878_6	UniRef90_UPI00115B56BE	126.0	2.04e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0137878_6	1196322.A370_05750	84.7	3.19e-20	Helix-turn-helix domain	N/A
Pfam	UHGV-0137878_6	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0137878_6	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
KOfam	UHGV-0137878_7	K01356	62.0	1.4e-17	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0137878_7	phrog_3502	58.4	1.6e-16	N/A	unknown function
UniRef90	UHGV-0137878_7	UniRef90_UPI001AE48220	91.3	8.61e-23	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0137878_7	1294142.CINTURNW_4512	78.2	2.2e-18	LexA DNA binding domain	N/A
Pfam	UHGV-0137878_7	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0137878_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0137878_7	PF01726,MF_00732,TIGR02944,COG1321	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0137878_8	457396.CSBG_01599	137.0	1.43003e-41	N/A	N/A
NCBIFam	UHGV-0137878_9	NF035925.1	N/A	N/A	geobacillin-26 family protein	N/A
KOfam	UHGV-0137878_10	K01448	95.3	7.8e-28	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0137878_10	phrog_12727	196.3	0	endolysin	lysis
UniRef90	UHGV-0137878_10	UniRef90_UPI001AEB9862	430.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0137878_10	1540257.JQMW01000009_gene2672	225.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0137878_10	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0137878_10	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0137878_10	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_11	phrog_1129	85.1	4.6e-25	holin	lysis
UniRef90	UHGV-0137878_11	UniRef90_UPI0011587C98	144.0	5.25487e-43	phage holin family protein	N/A
eggNOG-mapper	UHGV-0137878_11	1499683.CCFF01000017_gene2556	128.0	1.97e-37	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0137878_11	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0137878_11	PF16079	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137878_12	UniRef90_UPI000DCFCC11	108.0	2.19e-29	iduronate sulfatase	N/A
eggNOG-mapper	UHGV-0137878_12	457396.CSBG_01061	142.0	1.41531e-43	N/A	N/A
PHROG	UHGV-0137878_14	phrog_16267	136.6	0	N/A	unknown function
UniRef90	UHGV-0137878_14	UniRef90_UPI00082DA883	894.0	0	carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0137878_14	1294142.CINTURNW_1706	545.0	0	Phage minor structural protein	N/A
COG	UHGV-0137878_14	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0137878_15	phrog_1401	87.1	1.7e-25	N/A	unknown function
UniRef90	UHGV-0137878_15	UniRef90_UPI0018ABCBD1	141.0	3.92994e-41	N/A	N/A
eggNOG-mapper	UHGV-0137878_15	1262449.CP6013_3212	118.0	8.91e-33	N/A	N/A
structural_annotation	UHGV-0137878_15	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_16	phrog_2566	101.7	3.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0137878_16	1294142.CINTURNW_1040	91.3	2.83e-23	N/A	N/A
PHROG	UHGV-0137878_19	phrog_1194	130.5	6.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0137878_19	1280692.AUJL01000027_gene2149	191.0	0	N/A	N/A
Pfam	UHGV-0137878_19	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0137878_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_20	phrog_31409	387.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0137878_20	UniRef90_A0A383RGU3	392.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0137878_20	1280689.AUJC01000003_gene976	624.0	0	phage tail tape measure protein	N/A
COG	UHGV-0137878_20	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0137878_20	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_21	phrog_2066	47.2	0.0000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0137878_21	1280689.AUJC01000003_gene975	185.0	0	N/A	N/A
PHROG	UHGV-0137878_22	phrog_183	76.8	3.1e-22	tail chaperone protein	tail
UniRef90	UHGV-0137878_22	UniRef90_UPI0006C0E497	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137878_22	1280689.AUJC01000003_gene974	223.0	0	N/A	N/A
Pfam	UHGV-0137878_22	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0137878_22	PF19591	N/A	N/A	N/A	N/A
KOfam	UHGV-0137878_23	K19370	43.3	0.0000000000033	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-0137878_23	phrog_2546	80.4	3e-23	N/A	unknown function
UniRef90	UHGV-0137878_23	UniRef90_UPI0006C261E9	274.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0137878_23	1280689.AUJC01000003_gene973	110.0	6.15e-28	N/A	N/A
Pfam	UHGV-0137878_23	PF05154	N/A	N/A	TM2 domain	TM2
structural_annotation	UHGV-0137878_23	PF05154,PF02701,COG3478,COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_24	phrog_158	84.8	1.5e-24	major tail protein	tail
UniRef90	UHGV-0137878_24	UniRef90_A0A1B8RSU9	237.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0137878_24	1280689.AUJC01000003_gene972	237.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0137878_24	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0137878_24	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_25	phrog_78	64.9	1.4e-18	tail terminator	connector
eggNOG-mapper	UHGV-0137878_25	1294142.CINTURNW_1695	193.0	0	N/A	N/A
structural_annotation	UHGV-0137878_25	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_26	phrog_5	99.7	3.4e-29	tail completion or Neck1 protein	connector
UniRef90	UHGV-0137878_26	UniRef90_UPI0008369623	233.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0137878_26	1280689.AUJC01000003_gene970	208.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0137878_26	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0137878_26	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0137878_26	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_27	phrog_2168	124.9	2.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-0137878_27	1280689.AUJC01000003_gene969	187.0	0	N/A	N/A
structural_annotation	UHGV-0137878_27	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_28	phrog_132	80.2	1.9e-23	head-tail adaptor	connector
UniRef90	UHGV-0137878_28	UniRef90_UPI001158F70C	178.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0137878_28	1280689.AUJC01000003_gene968	157.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0137878_28	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0137878_28	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137878_29	UniRef90_UPI00096A3CC9	50.1	0.000000782	Rho termination factor N-terminal domain-containing protein	N/A
Pfam	UHGV-0137878_29	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
PHROG	UHGV-0137878_30	phrog_422	258.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0137878_30	693746.OBV_18090	387.0	0	N/A	N/A
structural_annotation	UHGV-0137878_30	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_31	phrog_172	162.8	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0137878_31	UniRef90_UPI0011593FAC	302.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137878_31	1280689.AUJC01000003_gene966	268.0	0	N/A	N/A
Pfam	UHGV-0137878_31	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0137878_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0137878_33	phrog_2841	330.3	0	minor head protein	head and packaging
UniRef90	UHGV-0137878_33	UniRef90_UPI00115A002E	664.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0137878_33	1280689.AUJC01000003_gene964	621.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0137878_33	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0137878_33	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0137878_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137878_33	PF15542,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0137878_34	1280692.AUJL01000025_gene2083	119.0	1.02e-30	Phage portal protein, SPP1 Gp6-like	N/A
PHROG	UHGV-0137878_35	phrog_64	338.3	0	portal protein	head and packaging
UniRef90	UHGV-0137878_35	UniRef90_UPI00115A1F99	647.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0137878_35	1280689.AUJC01000003_gene963	615.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0137878_35	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0137878_35	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0137878_35	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0137878_36	1280689.AUJC01000003_gene1021	100.0	7.62e-25	N/A	N/A
UniRef90	UHGV-0137878_37	UniRef90_UPI000B49AA7F	122.0	2.32e-32	N/A	N/A
Pfam	UHGV-0137878_37	PF16111	N/A	N/A	N/A	DUF4829
COG	UHGV-0137878_37	COG4219	N/A	N/A	Signal transducer regulating beta-lactamase production, contains metallopeptidase domain	N/A