UHGV-0139322 (vOTU-034726)

Viral Genome: UHGV-0139322

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0139322
vOTU ID	vOTU-034726
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_368362
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.54 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9679
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.37
Jumbo phage	No

Genome content
Genome length (bp)	33,758
GC content	27.98%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	93%
Average CDS length (bps)	500.95
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0139322_3	PF20385	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0139322_4	PF11372	N/A	N/A	N/A	N/A
KOfam	UHGV-0139322_6	K02086	48.7	0.00000000000008	dnaD; DNA replication protein	N/A
PHROG	UHGV-0139322_6	phrog_186	60.1	7e-18	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0139322_6	UniRef90_R5A158	417.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0139322_6	1123299.AUKZ01000018_gene209	62.8	0.00000000554	Replication initiation and membrane attachment	N/A
Pfam	UHGV-0139322_6	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0139322_6	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0139322_6	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0139322_6	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_7	phrog_2289	49.4	0.000000000000067	helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0139322_7	UniRef90_R5A614	314.0	0	Inhibitor_G39P domain-containing protein	N/A
Pfam	UHGV-0139322_7	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0139322_7	PF11417,PF08209	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_9	phrog_155	77.6	1.7e-22	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0139322_9	UniRef90_R5A0M1	425.0	0	Erf family protein	N/A
eggNOG-mapper	UHGV-0139322_9	1484479.DI14_04910	81.3	7.31e-16	ERF superfamily	N/A
Pfam	UHGV-0139322_9	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0139322_9	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_10	phrog_674	120.9	1.1e-35	N/A	unknown function
UniRef90	UHGV-0139322_10	UniRef90_A0A7X7EMF4	133.0	9.31e-34	N/A	N/A
eggNOG-mapper	UHGV-0139322_10	754027.HMPREF9554_00708	152.0	2.83001e-40	N/A	N/A
Pfam	UHGV-0139322_10	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0139322_10	PF07083	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0139322_13	1123263.AUKY01000096_gene1822	105.0	8.71e-25	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0139322_13	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
eggNOG-mapper	UHGV-0139322_14	1497679.EP56_05680	53.5	0.00000195	N/A	N/A
PHROG	UHGV-0139322_15	phrog_72	49.7	0.000000000000058	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0139322_15	UniRef90_UPI000C7BF263	125.0	1.64e-33	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0139322_15	508419.F8J186_9CAUD	134.0	8.91e-38	N/A	N/A
structural_annotation	UHGV-0139322_15	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_16	phrog_1123	54.7	6.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0139322_16	1308863.U5J9F3_9CAUD	67.0	0.00000000000212	N/A	N/A
KOfam	UHGV-0139322_17	K03111	136.3	3.3e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0139322_17	phrog_44	139.7	1.70006e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0139322_17	UniRef90_R5A412	254.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0139322_17	445972.ANACOL_01827	124.0	9.22e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0139322_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0139322_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0139322_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0139322_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0139322_17	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0139322_21	PF09947	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0139322_34	PF16360	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_35	phrog_20735	184.8	0	N/A	unknown function
UniRef90	UHGV-0139322_35	UniRef90_R5A140	404.0	0	RNA_ligase domain-containing protein	N/A
Pfam	UHGV-0139322_35	PF09414	N/A	N/A	RNA ligase	RNA_ligase
structural_annotation	UHGV-0139322_35	PF09414,MF_04150,TIGR01209,COG1423	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0139322_36	PF15456	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_38	phrog_2412	67.0	2.7e-19	N/A	unknown function
UniRef90	UHGV-0139322_38	UniRef90_R5AAQ5	244.0	0	N/A	N/A
eggNOG-mapper	UHGV-0139322_38	1122981.AUME01000026_gene531	75.1	0.00000000000000207	N/A	N/A
UniRef90	UHGV-0139322_39	UniRef90_R5A0K2	969.0	0	Putative phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0139322_39	645991.Sgly_0335	480.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0139322_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0139322_39	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_40	phrog_533	246.7	0	portal protein	head and packaging
UniRef90	UHGV-0139322_40	UniRef90_R5A3Z5	978.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0139322_40	1117108.PAALTS15_13582	441.0	0	N/A	N/A
structural_annotation	UHGV-0139322_40	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_42	phrog_581	138.7	0	minor head protein	head and packaging
UniRef90	UHGV-0139322_42	UniRef90_R5A5Z0	924.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0139322_42	1151292.QEW_4396	258.0	0	COG3209 Rhs family protein	N/A
Pfam	UHGV-0139322_42	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0139322_42	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0139322_42	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_45	phrog_2303	81.8	1.1e-23	head scaffolding protein	head and packaging
structural_annotation	UHGV-0139322_45	MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_46	phrog_422	228.5	0	major head protein	head and packaging
UniRef90	UHGV-0139322_46	UniRef90_W0U896	378.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0139322_46	1160721.RBI_II00538	378.0	0	N/A	N/A
structural_annotation	UHGV-0139322_46	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_49	phrog_541	89.5	2.8e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0139322_49	1391647.AVSV01000003_gene1810	91.3	5.08e-22	N/A	N/A
PHROG	UHGV-0139322_50	phrog_8710	128.8	1.7e-38	N/A	unknown function
UniRef90	UHGV-0139322_50	UniRef90_UPI0018A9BDCF	77.0	5.29e-16	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-0139322_50	1294142.CINTURNW_1032	88.2	3.76e-21	N/A	N/A
structural_annotation	UHGV-0139322_50	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_51	phrog_556	66.0	5.3e-19	minor head protein	head and packaging
UniRef90	UHGV-0139322_51	UniRef90_UPI00058FDD53	117.0	1.22e-31	minor capsid protein	N/A
eggNOG-mapper	UHGV-0139322_51	742740.HMPREF9474_03509	115.0	2.29e-31	N/A	N/A
PHROG	UHGV-0139322_52	phrog_2595	63.7	3e-18	head-tail connector protein	connector
UniRef90	UHGV-0139322_52	UniRef90_UPI001C301760	66.6	0.0000000000157	minor capsid protein	N/A
eggNOG-mapper	UHGV-0139322_52	394503.Ccel_3286	81.3	6.39e-18	N/A	N/A
Pfam	UHGV-0139322_52	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0139322_52	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_53	phrog_820	81.3	1.1e-23	major tail protein	tail
UniRef90	UHGV-0139322_53	UniRef90_R6DLA9	104.0	1.83e-25	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0139322_53	658659.HMPREF0983_03301	108.0	2.71e-28	N/A	N/A
Pfam	UHGV-0139322_53	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-0139322_53	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_54	phrog_8300	77.7	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0139322_54	1507.HMPREF0262_01185	53.5	0.000000119	N/A	N/A
structural_annotation	UHGV-0139322_54	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_55	phrog_8355	82.4	2.5e-24	N/A	unknown function
UniRef90	UHGV-0139322_55	UniRef90_A0A1M6RZ32	73.9	0.0000000000000064	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0139322_55	1123263.AUKY01000051_gene1072	69.3	0.0000000000000554	N/A	N/A
Pfam	UHGV-0139322_55	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-0139322_56	phrog_1535	200.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0139322_56	UniRef90_R5A122	801.0	0	ETS domain-containing protein	N/A
eggNOG-mapper	UHGV-0139322_56	645991.Sgly_0352	371.0	0	SLT domain	N/A
COG	UHGV-0139322_56	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0139322_57	phrog_1194	66.8	2.9e-19	N/A	unknown function
structural_annotation	UHGV-0139322_57	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_58	phrog_6616	60.3	5.9e-19	tail protein	tail
eggNOG-mapper	UHGV-0139322_58	1305708.M9Q2I5_9CAUD	74.3	0.0000000000651	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-0139322_58	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_59	phrog_372	215.8	0	tail protein	tail
UniRef90	UHGV-0139322_59	UniRef90_R7FHU8	157.0	3.62e-37	Tail protein	N/A
eggNOG-mapper	UHGV-0139322_59	658088.HMPREF0987_01104	93.2	9.89e-17	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0139322_59	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0139322_59	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0139322_59	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-0139322_62	K08640	57.3	3.8e-16	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0139322_62	phrog_894	41.9	0.000000000012	endolysin	lysis
UniRef90	UHGV-0139322_62	UniRef90_A0A843H2N1	267.0	0	Peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0139322_62	931626.Awo_c26840	61.6	0.00000000371	Peptidase M15	N/A
Pfam	UHGV-0139322_62	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0139322_62	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0139322_62	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0139322_62	PF08291,PF01471,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0139322_63	phrog_7566	46.0	0.00000000000091	N/A	unknown function
eggNOG-mapper	UHGV-0139322_63	1118057.CAGX01000020_gene1648	56.2	0.0000000268	N/A	N/A