Overview | |
---|---|
UHGV ID | UHGV-0139523 |
vOTU ID | vOTU-000018 |
Representative Genome? | No |
Source | GPD |
Original genome ID | uvig_388780 |
Associated BioSample | SAMN04329806 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 68.62 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 22 |
CheckV host markers | 4 |
Recoded stop codon | Yes |
Viral Content | |
---|---|
geNomad score | 0.9743 |
Virus hallmark genes (geNomad) | 6 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 35.62 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 120,200 |
GC content | 29.46% |
Genetic code | The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code (4) |
CDS genes | 141 |
CDS density | 92% |
Average CDS length (bps) | 781.21 |
Total tRNA genes | 21 |
Suppressor tRNA genes | 0 |