UHGV-0142226 (vOTU-162226)

Viral Genome: UHGV-0142226

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0142226
vOTU ID	vOTU-162226
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_440552
Associated BioSample	SAMN05971584
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	69.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.37
Jumbo phage	No

Genome content
Genome length (bp)	31,761
GC content	48.34%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	93%
Average CDS length (bps)	668.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0142226_4	phrog_1156	312.9	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142226_4	UniRef90_D7GNU9	1003.0	0	Phage/plasmid primase, P4 family, C-terminal domain	N/A
eggNOG-mapper	UHGV-0142226_4	649747.HMPREF0083_00553	307.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0142226_4	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0142226_4	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0142226_4	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0142226_4	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0142226_4	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0142226_4	PF08706,PF05272,PF02257,MF_04000,NF005477,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_5	K07171	74.5	1.1e-21	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0142226_5	phrog_1936	115.4	2.8e-34	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0142226_5	UniRef90_A0A1C5MWG4	308.0	0	mRNA interferase MazF4	N/A
eggNOG-mapper	UHGV-0142226_5	411461.DORFOR_01157	109.0	8.31e-28	N/A	N/A
Pfam	UHGV-0142226_5	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0142226_5	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0142226_5	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_7	phrog_21980	67.8	1.1e-19	N/A	unknown function
UniRef90	UHGV-0142226_7	UniRef90_D7GNU5	369.0	0	N/A	N/A
eggNOG-mapper	UHGV-0142226_7	742733.HMPREF9469_05080	73.6	0.000000000000563	N/A	N/A
Pfam	UHGV-0142226_7	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0142226_7	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_9	phrog_1829	145.9	2.20004e-43	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142226_9	UniRef90_A0A1C0AE21	439.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0142226_9	1121866.AUGK01000003_gene1409	193.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0142226_9	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-0142226_9	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-0142226_9	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142226_10	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_13	phrog_6721	279.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0142226_13	428125.CLOLEP_01387	305.0	0	N/A	N/A
structural_annotation	UHGV-0142226_13	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_15	K03698	44.4	0.0000000000026	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0142226_15	phrog_5889	106.5	2.3e-31	N/A	unknown function
UniRef90	UHGV-0142226_15	UniRef90_A0A1C5MUY3	392.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-0142226_15	1219626.HMPREF1639_07345	168.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0142226_15	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0142226_15	PF01966,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_16	phrog_229	123.4	1.8e-36	MazG-like pyrophosphatase	other
UniRef90	UHGV-0142226_16	UniRef90_D7GNT7	233.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0142226_16	428125.CLOLEP_01391	157.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0142226_16	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0142226_16	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0142226_16	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_18	phrog_236	103.5	3.8e-30	nucleotide kinase	other
UniRef90	UHGV-0142226_18	UniRef90_D7GXC8	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-0142226_18	1123263.AUKY01000015_gene1590	83.6	3.96e-20	N/A	N/A
Pfam	UHGV-0142226_18	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0142226_18	PF11753	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142226_19	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_21	phrog_20229	59.8	4.5e-17	N/A	unknown function
UniRef90	UHGV-0142226_21	UniRef90_D7GQL4	85.1	1.48e-20	Transmembrane Fragile-X-F protein	N/A
eggNOG-mapper	UHGV-0142226_21	1225795.K4I4H9_9CAUD	61.6	0.00000000000462	N/A	N/A
structural_annotation	UHGV-0142226_21	TIGR04438	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_22	phrog_434	99.8	2.9e-29	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142226_22	UniRef90_D7GXC5	684.0	0	Phage-related protein, predicted endonuclease	N/A
eggNOG-mapper	UHGV-0142226_22	1219626.HMPREF1639_07320	345.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0142226_22	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0142226_22	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0142226_22	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_23	K02319	40.5	0.0000000000073	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-0142226_23	phrog_1252	475.5	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142226_23	UniRef90_D7GXC4	1627.0	0	DNA polymerase elongation subunit (Family B)	N/A
eggNOG-mapper	UHGV-0142226_23	1121866.AUGK01000003_gene1403	681.0	0	DNA replication proofreading	N/A
Pfam	UHGV-0142226_23	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0142226_23	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-0142226_23	PF04404,PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_24	K18959	192.6	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-0142226_24	phrog_16	178.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142226_24	UniRef90_D7GXC3	909.0	0	DNA or RNA helicases of superfamily II	N/A
eggNOG-mapper	UHGV-0142226_24	1449050.JNLE01000003_gene3908	511.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-0142226_24	mREase_IV_00005	54.6	0.0000000000000012	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0142226_24	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0142226_24	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0142226_24	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0142226_24	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_25	K03552	40.1	0.000000000063	hjr; holliday junction resolvase Hjr [EC:3.1.21.10]	N/A
UniRef90	UHGV-0142226_25	UniRef90_D7GXC2	282.0	0	Archaeal holliday junction resolvase (Hjc)	N/A
eggNOG-mapper	UHGV-0142226_25	1449050.JNLE01000003_gene3909	122.0	9.83e-34	Recombination protein U	N/A
Pfam	UHGV-0142226_25	PF01870	N/A	N/A	Archaeal holliday junction resolvase (hjc)	Hjc
structural_annotation	UHGV-0142226_25	PF03838,MF_01490,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_27	K08309	66.6	5.1e-19	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0142226_27	phrog_19349	155.7	0	N/A	unknown function
UniRef90	UHGV-0142226_27	UniRef90_D7GXC0	437.0	0	Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains)	N/A
eggNOG-mapper	UHGV-0142226_27	742740.HMPREF9474_02375	130.0	9.63e-35	lytic transglycosylase activity	N/A
Pfam	UHGV-0142226_27	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0142226_27	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0142226_27	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142226_29	PF00157	N/A	N/A	N/A	N/A
UniRef90	UHGV-0142226_30	UniRef90_A0A1C6L0N4	132.0	1.3e-37	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0142226_30	PF08667,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0142226_31	K06400	296.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0142226_31	phrog_95	301.6	0	integrase	integration and excision
UniRef90	UHGV-0142226_31	UniRef90_A0A849CV84	601.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0142226_31	445972.ANACOL_03320	355.0	0	N/A	N/A
Pfam	UHGV-0142226_31	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0142226_31	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0142226_31	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0142226_31	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0142226_31	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_32	phrog_6918	91.0	9.4e-27	holin	lysis
UniRef90	UHGV-0142226_32	UniRef90_A0A6N8H4C3	118.0	1.87e-32	Holin	N/A
eggNOG-mapper	UHGV-0142226_32	1297617.JPJD01000020_gene301	115.0	4.75e-32	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0142226_32	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-0142226_32	TIGR01673.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0142226_32	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_33	phrog_17876	91.2	1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0142226_33	537007.BLAHAN_04259	78.6	1.52e-17	N/A	N/A
KOfam	UHGV-0142226_34	K01447	59.9	5.7e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0142226_34	phrog_20388	237.0	0	endolysin	lysis
UniRef90	UHGV-0142226_34	UniRef90_A0A374UNP8	395.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0142226_34	1203606.HMPREF1526_01931	297.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0142226_34	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0142226_34	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0142226_34	PF01510,PF01476,PF15591,MF_02014,MF_04111,MF_01354,NF008758,NF010723,TIGR00405,COG3023,COG5004,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_36	phrog_4105	96.9	1.3e-28	N/A	unknown function
UniRef90	UHGV-0142226_36	UniRef90_A0A8D9UHA9	108.0	1.74e-28	Holin protein	N/A
eggNOG-mapper	UHGV-0142226_36	742733.HMPREF9469_05011	118.0	2.64e-33	N/A	N/A
PHROG	UHGV-0142226_39	phrog_5302	237.8	0	tail protein	tail
UniRef90	UHGV-0142226_39	UniRef90_R6M197	207.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0142226_39	742740.HMPREF9474_02337	106.0	4.42e-21	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0142226_39	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0142226_39	PF07210,PF13620,PF16893,NF040788,COG2512	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0142226_40	1298920.KI911353_gene4837	54.7	0.00000121	N/A	N/A
PHROG	UHGV-0142226_41	phrog_18725	67.8	1.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0142226_41	585501.HMPREF6123_0822	98.6	1.75e-24	N/A	N/A
PHROG	UHGV-0142226_42	phrog_13879	280.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0142226_42	1235800.C819_00474	515.0	0	N/A	N/A
structural_annotation	UHGV-0142226_42	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_43	phrog_1194	101.4	6.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0142226_43	585501.HMPREF6123_0824	127.0	2.68e-36	N/A	N/A
Pfam	UHGV-0142226_43	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0142226_43	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0142226_44	phrog_1535	130.2	6.40001e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0142226_44	397290.C810_01419	88.6	0.0000000000000127	Transglycosylase SLT domain	N/A
COG	UHGV-0142226_44	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A