UHGV-0143491 (vOTU-151450)

Viral Genome: UHGV-0143491

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0143491
vOTU ID	vOTU-151450
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_415043
Associated BioSample	SAMN05414918
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.22 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9729
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	12.94
Jumbo phage	No

Genome content
Genome length (bp)	27,914
GC content	52.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	93%
Average CDS length (bps)	663.62
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0143491_1	K14059	43.4	0.0000000000067	int; integrase	N/A
UniRef90	UHGV-0143491_1	UniRef90_A0A143ZWJ3	72.8	0.000000000000472	Integrase_SAM-like_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0143491_1	665956.HMPREF1032_02703	303.0	0	Phage integrase, N-terminal SAM-like domain	N/A
COG	UHGV-0143491_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-0143491_2	phrog_9116	115.1	3.9e-34	tail protein	tail
eggNOG-mapper	UHGV-0143491_2	665956.HMPREF1032_03054	529.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0143491_2	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-0143491_2	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0143491_3	phrog_13879	157.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0143491_3	665956.HMPREF1032_03055	1216.0	0	N/A	N/A
structural_annotation	UHGV-0143491_3	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_4	phrog_1194	64.2	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0143491_4	665956.HMPREF1032_03056	278.0	0	N/A	N/A
structural_annotation	UHGV-0143491_4	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_5	phrog_1535	96.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0143491_5	UniRef90_A0A1C6JAZ8	123.0	4.27e-25	Phage-related protein	N/A
eggNOG-mapper	UHGV-0143491_5	665956.HMPREF1032_03057	1281.0	0	tape measure	N/A
COG	UHGV-0143491_5	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_6	phrog_706	97.5	1.4e-28	N/A	unknown function
UniRef90	UHGV-0143491_6	UniRef90_UPI0013141117	238.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0143491_6	665956.HMPREF1032_03058	377.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0143491_6	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0143491_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_7	phrog_11299	109.8	2e-32	N/A	unknown function
eggNOG-mapper	UHGV-0143491_7	665956.HMPREF1032_03059	282.0	0	N/A	N/A
structural_annotation	UHGV-0143491_7	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_8	phrog_3099	57.5	2.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0143491_8	665956.HMPREF1032_03060	350.0	0	N/A	N/A
structural_annotation	UHGV-0143491_8	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_9	phrog_3266	85.0	7.3e-25	tail completion	connector
eggNOG-mapper	UHGV-0143491_9	525255.HMPREF0077_0380	62.8	0.000000000142	N/A	N/A
structural_annotation	UHGV-0143491_9	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_10	phrog_556	88.3	7.3e-26	minor head protein	head and packaging
UniRef90	UHGV-0143491_10	UniRef90_UPI001958E7C1	180.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0143491_10	665956.HMPREF1032_03062	302.0	0	Minor capsid protein	N/A
Pfam	UHGV-0143491_10	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0143491_10	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_11	phrog_3366	56.0	5.5e-16	N/A	unknown function
Pfam	UHGV-0143491_11	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0143491_11	PF20536,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_12	phrog_541	90.0	2.2e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0143491_12	665956.HMPREF1032_03064	275.0	0	N/A	N/A
PHROG	UHGV-0143491_13	phrog_1378	50.1	0.000000000000047	N/A	unknown function
UniRef90	UHGV-0143491_13	UniRef90_G9RRU6	204.0	0	C2H2-type domain-containing protein	N/A
Pfam	UHGV-0143491_13	PF13912	N/A	N/A	C2H2-type zinc finger	zf-C2H2_6
PHROG	UHGV-0143491_14	phrog_422	290.8	0	major head protein	head and packaging
UniRef90	UHGV-0143491_14	UniRef90_T3D9C6	372.0	0	Putative phage major capsid protein	N/A
eggNOG-mapper	UHGV-0143491_14	665956.HMPREF1032_03066	604.0	0	COG NOG28280 non supervised orthologous group	N/A
structural_annotation	UHGV-0143491_14	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_15	phrog_194	95.3	8.6e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-0143491_15	UniRef90_A0A1C5UDW0	153.0	4.17587e-43	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0143491_15	665956.HMPREF1032_03067	405.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0143491_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0143491_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_16	phrog_581	210.4	0	minor head protein	head and packaging
UniRef90	UHGV-0143491_16	UniRef90_UPI001CD3268D	291.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0143491_16	665956.HMPREF1032_03068	736.0	0	N/A	N/A
Pfam	UHGV-0143491_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0143491_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0143491_16	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_17	phrog_533	327.8	0	portal protein	head and packaging
UniRef90	UHGV-0143491_17	UniRef90_G9RRV0	936.0	0	A118 family phage portal protein, putative	N/A
eggNOG-mapper	UHGV-0143491_17	665956.HMPREF1032_03069	936.0	0	N/A	N/A
structural_annotation	UHGV-0143491_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0143491_18	K06909	73.6	3.1e-21	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0143491_18	phrog_2	92.7	6.6e-27	terminase large subunit	head and packaging
UniRef90	UHGV-0143491_18	UniRef90_G9RRV1	675.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0143491_18	665956.HMPREF1032_03070	675.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0143491_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0143491_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0143491_18	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_19	phrog_1889	187.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-0143491_19	UniRef90_A0A6P1YAL8	96.3	3.95e-20	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0143491_19	665956.HMPREF1032_03073	471.0	0	N/A	N/A
Pfam	UHGV-0143491_19	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0143491_19	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0143491_19	PF01920,NF040601,COG1382	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_20	phrog_27044	119.0	3.8e-35	N/A	unknown function
UniRef90	UHGV-0143491_20	UniRef90_A0A173WVY7	134.0	1.63e-37	Queuosine ECF transporter S component QueT	N/A
eggNOG-mapper	UHGV-0143491_20	665956.HMPREF1032_03074	288.0	0	QueT transporter	N/A
Pfam	UHGV-0143491_20	PF06177	N/A	N/A	QueT transporter	QueT
COG	UHGV-0143491_20	COG4708	N/A	N/A	ECF-type transporter of queuosine precursor, membrane (S) component	N/A
structural_annotation	UHGV-0143491_20	PF06177,MF_01572,TIGR04522,COG4708	N/A	N/A	N/A	N/A
UniRef90	UHGV-0143491_21	UniRef90_A0A372WZ60	540.0	0	Methyltransferase domain-containing protein	N/A
Pfam	UHGV-0143491_21	PF13489	N/A	N/A	Methyltransferase domain	Methyltransf_23
structural_annotation	UHGV-0143491_21	PF05891,MF_00472,NF008264,COG2227	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_22	phrog_887	176.1	0	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0143491_22	665956.HMPREF1032_03076	497.0	0	N/A	N/A
structural_annotation	UHGV-0143491_22	PF00290,MF_01634,TIGR00432,COG0269	N/A	N/A	N/A	N/A
KOfam	UHGV-0143491_23	K03497	65.9	7.8e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0143491_23	phrog_620	189.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0143491_23	UniRef90_A0A372V2B3	351.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0143491_23	665956.HMPREF1032_03077	350.0	0	DNA binding	N/A
PADLOC	UHGV-0143491_23	MTase_II_00015	115.1	1.1e-33	Type II methyltransferase	RM
Pfam	UHGV-0143491_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0143491_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0143491_23	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_24	phrog_1558	191.1	0	N/A	unknown function
UniRef90	UHGV-0143491_24	UniRef90_A0A6N2ZQR4	139.0	2.89e-38	HTH_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-0143491_24	665956.HMPREF1032_03078	344.0	0	N/A	N/A
structural_annotation	UHGV-0143491_24	TIGR01637,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_28	phrog_478	137.4	4.99997e-41	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0143491_28	UniRef90_A0A0U2WUA4	168.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0143491_28	665956.HMPREF1032_03082	251.0	0	N/A	N/A
structural_annotation	UHGV-0143491_29	PF06257,NF011232	N/A	N/A	N/A	N/A
PHROG	UHGV-0143491_30	phrog_38832	54.1	4.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0143491_30	665956.HMPREF1032_00143	72.8	0.0000000000000551	N/A	N/A
structural_annotation	UHGV-0143491_30	PF18300,MF_01549,NF008636,COG4568	N/A	N/A	N/A	N/A
UniRef90	UHGV-0143491_35	UniRef90_A0A8D9PDK2	64.7	0.0000000000144	Zinc-ribbon containing domain	N/A
KOfam	UHGV-0143491_37	K07171	60.8	3.8e-17	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0143491_37	phrog_1936	58.8	9.1e-17	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0143491_37	UniRef90_A0A1C5KYZ2	64.7	0.000000000173	mRNA interferase MazF	N/A
eggNOG-mapper	UHGV-0143491_37	665956.HMPREF1032_03178	290.0	0	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-0143491_37	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0143491_37	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0143491_37	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A