UHGV-0144615 (vOTU-030037)

Viral Genome: UHGV-0144615

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0144615
vOTU ID	vOTU-030037
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_408771
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.89 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9814
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.98
Jumbo phage	No

Genome content
Genome length (bp)	25,046
GC content	56.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	33
CDS density	93%
Average CDS length (bps)	706.82
Total tRNA genes	5
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0144615_1	phrog_30143	541.8	0	N/A	unknown function
UniRef90	UHGV-0144615_1	UniRef90_A0A2V2CUF8	691.0	0	UPF0371 protein DBX49_00575	N/A
eggNOG-mapper	UHGV-0144615_1	1121335.Clst_1955	660.0	0	N/A	N/A
Pfam	UHGV-0144615_1	PF08903	N/A	N/A	N/A	DUF1846
Pfam	UHGV-0144615_1	PF20921	N/A	N/A	N/A	DUF1846_C
NCBIFam	UHGV-0144615_1	NF010184.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0144615_1	COG4868	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_2	phrog_199	65.2	7.6e-19	holin	lysis
UniRef90	UHGV-0144615_2	UniRef90_R5AT18	270.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0144615_2	742738.HMPREF9460_01388	147.0	2.9147e-43	Bacteriophage holin family	N/A
Pfam	UHGV-0144615_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0144615_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0144615_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0144615_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0144615_3	K01447	83.9	2.6e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0144615_3	phrog_5182	148.5	6.16571e-44	endolysin	lysis
UniRef90	UHGV-0144615_3	UniRef90_R5AZE6	263.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-0144615_3	397288.C806_00777	204.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0144615_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0144615_3	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-0144615_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0144615_3	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0144615_4	K18454	56.1	5.4e-16	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0144615_4	phrog_18593	76.9	3e-22	N/A	unknown function
UniRef90	UHGV-0144615_4	UniRef90_A0A1C5VT90	161.0	0	Chitinase A1	N/A
eggNOG-mapper	UHGV-0144615_4	552398.HMPREF0866_03095	134.0	8.87e-38	N/A	N/A
Pfam	UHGV-0144615_4	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0144615_4	PF14600	N/A	N/A	N/A	N/A
Pfam	UHGV-0144615_6	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-0144615_6	PF13306	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144615_7	PF20622,NF033814	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144615_8	PF00629,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_10	phrog_6616	66.2	7.9e-20	tail protein	tail
COG	UHGV-0144615_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0144615_10	PF13550,PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144615_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_12	phrog_1535	116.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0144615_12	UniRef90_A0A810PX76	112.0	2.99e-22	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0144615_12	1449050.JNLE01000003_gene3881	145.0	2.93e-33	domain protein	N/A
COG	UHGV-0144615_12	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144615_12	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_13	phrog_706	111.2	8.9e-33	N/A	unknown function
UniRef90	UHGV-0144615_13	UniRef90_UPI00164D7633	177.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0144615_13	693746.OBV_18170	171.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0144615_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0144615_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_14	phrog_11299	95.8	4.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0144615_14	1449050.JNLE01000003_gene3883	65.9	0.0000000000146	N/A	N/A
structural_annotation	UHGV-0144615_14	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_15	phrog_3099	87.5	1.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0144615_15	693746.OBV_18150	223.0	0	N/A	N/A
structural_annotation	UHGV-0144615_15	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_16	phrog_3266	65.0	1.1e-18	tail completion	connector
eggNOG-mapper	UHGV-0144615_16	476272.RUMHYD_01781	117.0	2.18e-31	N/A	N/A
structural_annotation	UHGV-0144615_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_17	phrog_556	63.4	8.6e-19	minor head protein	head and packaging
UniRef90	UHGV-0144615_17	UniRef90_A0A1H7MNM8	119.0	2.01e-31	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0144615_17	476272.RUMHYD_01780	116.0	2.11e-31	N/A	N/A
Pfam	UHGV-0144615_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0144615_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_18	phrog_3366	53.6	0.0000000000000045	N/A	unknown function
structural_annotation	UHGV-0144615_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_19	phrog_541	68.7	8.4e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0144615_19	476272.RUMHYD_01778	72.0	0.0000000000000855	N/A	N/A
PHROG	UHGV-0144615_20	phrog_267	51.4	0.000000000000015	major head protein	head and packaging
eggNOG-mapper	UHGV-0144615_20	1235799.C818_04223	159.0	3.08286e-44	N/A	N/A
structural_annotation	UHGV-0144615_20	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_21	phrog_194	42.7	0.00000000001	head scaffolding protein	head and packaging
UniRef90	UHGV-0144615_21	UniRef90_UPI001C0EBA51	127.0	3.38e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0144615_21	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-0144615_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0144615_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_23	phrog_581	240.7	0	minor head protein	head and packaging
UniRef90	UHGV-0144615_23	UniRef90_A0A3D4T830	344.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0144615_23	476272.RUMHYD_01761	223.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0144615_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0144615_23	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
COG	UHGV-0144615_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144615_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_24	phrog_533	213.1	0	portal protein	head and packaging
UniRef90	UHGV-0144615_24	UniRef90_A0A173TY48	344.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0144615_24	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0144615_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_25	phrog_1233	95.9	4.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0144615_25	1415774.U728_832	93.2	3.72e-23	N/A	N/A
structural_annotation	UHGV-0144615_25	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-0144615_26	K06909	396.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0144615_26	phrog_5653	147.7	6.44597e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0144615_26	UniRef90_A0A416S378	634.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0144615_26	33035.JPJF01000106_gene3136	597.0	0	Terminase small subunit	N/A
Pfam	UHGV-0144615_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0144615_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0144615_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0144615_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0144615_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0144615_26	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144615_27	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_28	phrog_36	58.0	1.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0144615_28	UniRef90_UPI001C10AB33	122.0	4.43e-33	N/A	N/A
eggNOG-mapper	UHGV-0144615_28	428125.CLOLEP_01806	104.0	1.81e-26	N/A	N/A
Pfam	UHGV-0144615_28	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0144615_28	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_30	phrog_2245	107.3	1.3e-31	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0144615_30	UniRef90_A0A4U9RLZ8	91.7	2.78e-22	N/A	N/A
eggNOG-mapper	UHGV-0144615_30	293826.Amet_2596	101.0	5e-26	N/A	N/A
structural_annotation	UHGV-0144615_30	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_31	phrog_5781	67.5	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0144615_31	573061.Clocel_3558	78.6	1.69e-16	N/A	N/A
Pfam	UHGV-0144615_31	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0144615_31	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0144615_31	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_32	phrog_1029	224.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0144615_32	1203606.HMPREF1526_01890	371.0	0	N/A	N/A
structural_annotation	UHGV-0144615_32	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0144615_33	phrog_997	120.3	1.2e-35	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0144615_33	UniRef90_R6MCS9	110.0	7.71e-29	N/A	N/A
eggNOG-mapper	UHGV-0144615_33	1519439.JPJG01000059_gene1910	177.0	0	N/A	N/A