UHGV-0145870 (vOTU-015254)

Viral Genome: UHGV-0145870

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0145870
vOTU ID	vOTU-015254
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_431550
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.54 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9576
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	11.29
Jumbo phage	No

Genome content
Genome length (bp)	44,773
GC content	59.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	90%
Average CDS length (bps)	630.52
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0145870_1	phrog_5400	56.0	4.9e-16	N/A	unknown function
UniRef90	UHGV-0145870_1	UniRef90_UPI001D0B038F	345.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0145870_1	563192.HMPREF0179_01586	309.0	0	N/A	N/A
PHROG	UHGV-0145870_2	phrog_28816	69.7	2.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0145870_2	1122237.AUGQ01000016_gene2624	52.8	0.000000114	ParB-like nuclease domain	N/A
COG	UHGV-0145870_2	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-0145870_3	K07128	164.9	0	N/A	N/A
PHROG	UHGV-0145870_3	phrog_11143	482.5	0	N/A	unknown function
UniRef90	UHGV-0145870_3	UniRef90_UPI0013EDF1FA	563.0	0	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-0145870_3	1408428.JNJP01000047_gene1589	783.0	0	N/A	N/A
Pfam	UHGV-0145870_3	PF00005	N/A	N/A	ABC transporter	ABC_tran
COG	UHGV-0145870_3	COG2401	N/A	N/A	ABC-type ATPase fused to a predicted acetyltransferase domain	N/A
structural_annotation	UHGV-0145870_3	PF12568,MF_01005,MF_02018,NF007480,NF011709,COG4525,COG0456	N/A	N/A	N/A	N/A
KOfam	UHGV-0145870_4	K00604	128.9	5.6e-38	MTFMT, fmt; methionyl-tRNA formyltransferase [EC:2.1.2.9]	N/A
PHROG	UHGV-0145870_4	phrog_9240	175.6	0	cyanobacterial phosphoribosylglycinamide formyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0145870_4	UniRef90_G1V849	405.0	0	Formyl_trans_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0145870_4	207559.Dde_1225	213.0	0	PFAM Formyl transferase	N/A
Pfam	UHGV-0145870_4	PF00551	N/A	N/A	Formyl transferase	Formyl_trans_N
COG	UHGV-0145870_4	COG0223	N/A	N/A	Methionyl-tRNA formyltransferase	N/A
structural_annotation	UHGV-0145870_4	PF00551,MF_00182,TIGR00460,COG0223	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0145870_5	1408428.JNJP01000030_gene939	195.0	0	Methyltransferase small domain	N/A
COG	UHGV-0145870_5	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
eggNOG-mapper	UHGV-0145870_6	1121447.JONL01000012_gene3406	97.8	6.95e-19	N/A	N/A
eggNOG-mapper	UHGV-0145870_8	665942.HMPREF1022_02937	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-0145870_9	665942.HMPREF1022_02936	147.0	1.85952e-42	N/A	N/A
structural_annotation	UHGV-0145870_9	PF11039,MF_02210,NF011709,COG1670	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_10	phrog_892	64.2	7.6e-31	tail fiber protein	tail
PHROG	UHGV-0145870_11	phrog_511	343.7	0	internal virion protein	head and packaging
UniRef90	UHGV-0145870_11	UniRef90_A0A1K1LGT2	486.0	0	N/A	N/A
eggNOG-mapper	UHGV-0145870_11	665942.HMPREF1022_02934	674.0	0	N/A	N/A
structural_annotation	UHGV-0145870_11	PF11134,MF_03027,NF040673,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_13	phrog_3342	68.1	9.2e-20	N/A	unknown function
UniRef90	UHGV-0145870_13	UniRef90_UPI001D0BA9B1	112.0	6.89e-31	pseudouridine synthase	N/A
eggNOG-mapper	UHGV-0145870_13	563192.HMPREF0179_03427	123.0	4.62e-36	N/A	N/A
KOfam	UHGV-0145870_14	K24429	54.2	9.9e-16	ADAMTSL1_3; ADAMTS-like protein 1/3	N/A
eggNOG-mapper	UHGV-0145870_14	10224.XP_006823538.1	68.9	0.0000000000858	negative regulation of cellular response to hepatocyte growth factor stimulus	N/A
Pfam	UHGV-0145870_14	PF19030	N/A	N/A	Thrombospondin type 1 domain	TSP1_ADAMTS
structural_annotation	UHGV-0145870_14	PF19030	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_16	phrog_11393	58.6	9.6e-17	tail fiber protein	tail
eggNOG-mapper	UHGV-0145870_16	1408428.JNJP01000079_gene3365	187.0	0	Phage tail-collar fibre protein	N/A
COG	UHGV-0145870_16	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-0145870_18	411470.RUMGNA_00121	107.0	1.11e-23	N/A	N/A
eggNOG-mapper	UHGV-0145870_19	665942.HMPREF1022_02925	195.0	0	N/A	N/A
COG	UHGV-0145870_19	COG5563	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_20	phrog_437	79.9	3.1e-23	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0145870_20	665942.HMPREF1022_02924	124.0	3.41e-33	N/A	N/A
structural_annotation	UHGV-0145870_20	PF20387,TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_21	phrog_399	56.8	2.7e-16	structural protein	head and packaging
UniRef90	UHGV-0145870_21	UniRef90_A0A1K1LD89	201.0	0	Conserved phage protein	N/A
eggNOG-mapper	UHGV-0145870_21	665942.HMPREF1022_02923	218.0	0	N/A	N/A
Pfam	UHGV-0145870_21	PF20387	N/A	N/A	N/A	DUF6682
structural_annotation	UHGV-0145870_21	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0145870_22	665942.HMPREF1022_02922	80.1	5.67e-17	N/A	N/A
PHROG	UHGV-0145870_23	phrog_1357	166.9	0	major head protein	head and packaging
UniRef90	UHGV-0145870_23	UniRef90_UPI0013EB0C0B	488.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0145870_23	665942.HMPREF1022_02921	486.0	0	N/A	N/A
NCBIFam	UHGV-0145870_23	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0145870_23	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0145870_24	596152.DesU5LDRAFT_1925	65.9	0.00000000164	N/A	N/A
PHROG	UHGV-0145870_26	phrog_332	203.3	0	head-tail adaptor	connector
eggNOG-mapper	UHGV-0145870_26	665942.HMPREF1022_02918	746.0	0	N/A	N/A
structural_annotation	UHGV-0145870_26	PF12236,MF_04120,TIGR01542,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_28	UniRef90_UPI0004986967	75.1	0.00000000000000369	N/A	N/A
KOfam	UHGV-0145870_29	K08640	93.2	5e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0145870_29	phrog_17373	110.6	1.7e-32	peptidase	other
UniRef90	UHGV-0145870_29	UniRef90_G1UY45	265.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0145870_29	1408428.JNJP01000012_gene1153	267.0	0	peptidase M15A	N/A
Pfam	UHGV-0145870_29	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0145870_29	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0145870_29	PF05951,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0145870_31	1408428.JNJP01000030_gene941	141.0	2.9105e-42	Phage regulatory protein Rha (Phage_pRha)	N/A
COG	UHGV-0145870_31	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
UniRef90	UHGV-0145870_32	UniRef90_UPI000A97A781	103.0	1.43e-23	N/A	N/A
eggNOG-mapper	UHGV-0145870_32	717772.THIAE_09685	87.0	4.14e-18	N/A	N/A
UniRef90	UHGV-0145870_33	UniRef90_UPI001D0AAF0D	96.3	6.56e-25	MerR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0145870_33	411464.DESPIG_01300	76.3	1.57e-17	N/A	N/A
eggNOG-mapper	UHGV-0145870_34	1121447.JONL01000011_gene2307	65.5	0.000000000315	N/A	N/A
PHROG	UHGV-0145870_35	phrog_38	258.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0145870_35	UniRef90_UPI001D0B454B	939.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0145870_35	563192.HMPREF0179_00169	360.0	0	Terminase RNaseH-like domain	N/A
Pfam	UHGV-0145870_35	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0145870_35	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0145870_35	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0145870_35	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0145870_37	PF13613	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_40	phrog_824	140.3	5.79997e-42	N/A	unknown function
UniRef90	UHGV-0145870_40	UniRef90_G1UY34	303.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0145870_40	563192.HMPREF0179_01752	206.0	0	VRR_NUC	N/A
Pfam	UHGV-0145870_40	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0145870_41	phrog_2514	71.3	1.2e-20	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0145870_41	UniRef90_UPI001D09F98A	421.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0145870_41	563192.HMPREF0179_01754	566.0	0	DnaD domain protein	N/A
COG	UHGV-0145870_41	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0145870_41	PF07106,TIGR01610,COG0735	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_42	UniRef90_UPI001EDB188E	199.0	0	RNA helicase	N/A
KOfam	UHGV-0145870_43	K07741	107.3	3.7e-31	antB; anti-repressor protein	N/A
PHROG	UHGV-0145870_43	phrog_130	226.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0145870_43	UniRef90_E5Y6E3	511.0	0	Anti-repressor protein	N/A
eggNOG-mapper	UHGV-0145870_43	1408428.JNJP01000132_gene2355	514.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0145870_43	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0145870_43	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0145870_43	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0145870_43	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_44	UniRef90_E5Y6A6	160.0	0	HTH_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-0145870_44	563192.HMPREF0179_01757	352.0	0	N/A	N/A
Pfam	UHGV-0145870_44	PF06892	N/A	N/A	Phage regulatory protein CII (CP76)	Phage_CP76
structural_annotation	UHGV-0145870_45	PF20800	N/A	N/A	N/A	N/A
KOfam	UHGV-0145870_46	K01356	44.5	0.0000000000029	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0145870_46	phrog_4	50.5	0.000000000000039	transcriptional repressor	transcription regulation
UniRef90	UHGV-0145870_46	UniRef90_UPI001D0A93D8	391.0	0	S24/S26 family peptidase	N/A
eggNOG-mapper	UHGV-0145870_46	665942.HMPREF1022_00127	278.0	0	Peptidase S24-like	N/A
COG	UHGV-0145870_46	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0145870_46	PF00717,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0145870_47	1453498.LG45_04985	95.5	1.75e-24	regulation of single-species biofilm formation	N/A
COG	UHGV-0145870_47	COG2378	N/A	N/A	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	N/A
structural_annotation	UHGV-0145870_47	PF13280,NF008636,COG4568	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_49	UniRef90_UPI001D0B8C83	108.0	2.45e-29	amino acid-binding protein	N/A
eggNOG-mapper	UHGV-0145870_49	1408428.JNJP01000135_gene3787	141.0	3.96567e-43	N/A	N/A
Pfam	UHGV-0145870_49	PF06892	N/A	N/A	Phage regulatory protein CII (CP76)	Phage_CP76
structural_annotation	UHGV-0145870_49	PF06892,NF041471	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_50	UniRef90_A0A1B7XEK5	95.9	3.66e-24	Amino acid-binding protein	N/A
eggNOG-mapper	UHGV-0145870_50	563192.HMPREF0179_01762	150.0	0	N/A	N/A
Pfam	UHGV-0145870_50	PF06892	N/A	N/A	Phage regulatory protein CII (CP76)	Phage_CP76
structural_annotation	UHGV-0145870_50	PF06892,NF041471	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0145870_51	PF13443,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_52	UniRef90_UPI001C3C13C2	129.0	1.36e-37	N/A	N/A
eggNOG-mapper	UHGV-0145870_52	1408428.JNJP01000135_gene3788	164.0	0	N/A	N/A
Pfam	UHGV-0145870_52	PF13711	N/A	N/A	N/A	DUF4160
structural_annotation	UHGV-0145870_52	PF13711	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_53	UniRef90_UPI001C3A936A	134.0	1.15e-39	N/A	N/A
eggNOG-mapper	UHGV-0145870_53	563192.HMPREF0179_01765	172.0	0	N/A	N/A
Pfam	UHGV-0145870_53	PF10387	N/A	N/A	N/A	DUF2442
PHROG	UHGV-0145870_58	phrog_2324	133.3	1.1e-39	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0145870_58	UniRef90_UPI001D09A1C9	389.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0145870_58	1408428.JNJP01000133_gene2459	513.0	0	ERF superfamily	N/A
Pfam	UHGV-0145870_58	PF04404	N/A	N/A	ERF superfamily	ERF
KOfam	UHGV-0145870_59	K03111	173.2	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0145870_59	phrog_44	151.9	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0145870_59	UniRef90_G1UY14	305.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0145870_59	1408428.JNJP01000005_gene6	305.0	0	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-0145870_59	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0145870_59	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0145870_59	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0145870_59	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0145870_59	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0145870_60	phrog_674	111.4	5.4e-33	N/A	unknown function
UniRef90	UHGV-0145870_60	UniRef90_UPI0013EE3DEB	101.0	2.91e-21	N/A	N/A
eggNOG-mapper	UHGV-0145870_60	1408428.JNJP01000133_gene2461	582.0	0	N/A	N/A
Pfam	UHGV-0145870_60	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0145870_60	PF07083	N/A	N/A	N/A	N/A
UniRef90	UHGV-0145870_61	UniRef90_A0A7W8C1M3	158.0	1.23006e-41	DNA-directed RNA polymerase subunit RPC12/RpoP	N/A
eggNOG-mapper	UHGV-0145870_61	1408428.JNJP01000133_gene2462	565.0	0	N/A	N/A
eggNOG-mapper	UHGV-0145870_63	563192.HMPREF0179_01773	144.0	1.12104e-44	N/A	N/A
UniRef90	UHGV-0145870_64	UniRef90_UPI001D0AEFDC	170.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0145870_64	563192.HMPREF0179_01774	230.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-0145870_64	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-0145870_64	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A