UHGV-0146883 (vOTU-019420)

Viral Genome: UHGV-0146883

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0146883
vOTU ID	vOTU-019420
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_425574
Associated BioSample	SAMN05826984
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.76 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9791
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.01
Jumbo phage	No

Genome content
Genome length (bp)	27,810
GC content	42.20%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	94%
Average CDS length (bps)	534.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0146883_3	397290.C810_05225	70.5	0.00000000000000337	N/A	N/A
PHROG	UHGV-0146883_6	phrog_25231	55.2	9.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0146883_6	742733.HMPREF9469_06061	68.6	0.0000000000000769	N/A	N/A
structural_annotation	UHGV-0146883_6	PF04936	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0146883_7	476272.RUMHYD_01751	73.2	0.00000000000000132	N/A	N/A
AcrCatalog	UHGV-0146883_7	cluster_11670	93.2	7.79e-28	NA	N/A
UniRef90	UHGV-0146883_8	UniRef90_A0A0U5Q8E1	95.9	9.99e-25	Antitoxin HipB	N/A
KOfam	UHGV-0146883_9	K22300	54.1	2.8e-28	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0146883_9	phrog_8	51.2	1.6e-28	transcriptional regulator	transcription regulation
UniRef90	UHGV-0146883_9	UniRef90_A0A0U5I2B2	256.0	0	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0146883_9	642492.Clole_1473	67.4	0.00000000000785	sequence-specific DNA binding	N/A
PADLOC	UHGV-0146883_9	retron_type_VI_hth_cluster2_1	48.2	4.7e-25	N/A	Retron
Pfam	UHGV-0146883_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
NCBIFam	UHGV-0146883_9	NF041951.1	N/A	N/A	RstR family transcriptional repressor	N/A
COG	UHGV-0146883_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0146883_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_10	phrog_33130	124.0	3.3e-37	N/A	unknown function
UniRef90	UHGV-0146883_10	UniRef90_A0A3B9CD52	75.1	6.62e-16	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0146883_10	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0146883_11	K07474	103.3	4.9e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0146883_11	phrog_51	119.7	2.3e-35	terminase small subunit	head and packaging
UniRef90	UHGV-0146883_11	UniRef90_A0A1I0K7H5	228.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0146883_11	476272.RUMHYD_01754	122.0	2.81e-34	Terminase small subunit	N/A
Pfam	UHGV-0146883_11	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0146883_11	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0146883_11	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0146883_12	K06909	334.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0146883_12	phrog_3717	154.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0146883_12	UniRef90_R0BLA8	845.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0146883_12	397291.C804_01612	402.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0146883_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0146883_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0146883_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0146883_12	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_14	phrog_533	286.2	0	portal protein	head and packaging
UniRef90	UHGV-0146883_14	UniRef90_A0A1C6CDM8	682.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0146883_14	33035.JPJF01000106_gene3135	535.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0146883_14	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_15	phrog_19695	70.9	3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0146883_15	411462.DORLON_00772	73.9	6.36e-16	N/A	N/A
structural_annotation	UHGV-0146883_15	PF19714	N/A	N/A	N/A	N/A
UniRef90	UHGV-0146883_16	UniRef90_A0A174NC72	190.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0146883_16	742733.HMPREF9469_00973	176.0	4.1058e-43	N/A	N/A
structural_annotation	UHGV-0146883_16	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_17	phrog_581	284.4	0	minor head protein	head and packaging
UniRef90	UHGV-0146883_17	UniRef90_A0A1C6CDG2	620.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0146883_17	33035.JPJF01000106_gene3134	449.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0146883_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0146883_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0146883_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_18	phrog_3754	104.9	7.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0146883_18	476272.RUMHYD_01764	218.0	0	N/A	N/A
UniRef90	UHGV-0146883_19	UniRef90_A0A417UWY7	83.2	1.14e-18	CTP synthase	N/A
eggNOG-mapper	UHGV-0146883_19	411490.ANACAC_00705	91.7	5.68e-23	N/A	N/A
UniRef90	UHGV-0146883_20	UniRef90_A0A843HPX3	75.5	1.18e-16	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0146883_20	1235790.C805_00057	57.4	0.000000000291	N/A	N/A
structural_annotation	UHGV-0146883_20	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_21	phrog_21718	164.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0146883_21	476272.RUMHYD_01768	162.0	0	N/A	N/A
PHROG	UHGV-0146883_22	phrog_22984	74.9	9.8e-22	N/A	unknown function
PHROG	UHGV-0146883_23	phrog_16490	202.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0146883_23	658655.HMPREF0988_00917	174.0	0	N/A	N/A
PHROG	UHGV-0146883_25	phrog_20016	50.3	0.000000000000033	N/A	unknown function
eggNOG-mapper	UHGV-0146883_25	1235790.C805_00062	50.4	0.00000584	N/A	N/A
structural_annotation	UHGV-0146883_25	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_26	phrog_28802	243.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0146883_26	476272.RUMHYD_01772	254.0	0	N/A	N/A
PHROG	UHGV-0146883_27	phrog_99	52.4	0.000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146883_27	UniRef90_A0A0U5PL36	273.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0146883_27	1304866.K413DRAFT_4685	173.0	0	N/A	N/A
UniRef90	UHGV-0146883_28	UniRef90_N9YMZ1	174.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0146883_28	742738.HMPREF9460_04059	60.1	0.000000000429	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0146883_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0146883_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0146883_28	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0146883_30	UniRef90_UPI001D15D4B7	68.2	0.0000000000000918	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0146883_30	476272.RUMHYD_01773	57.4	0.000000000289	Cysteine-rich KTR	N/A
Pfam	UHGV-0146883_30	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
PHROG	UHGV-0146883_31	phrog_194	61.5	1.8e-17	head scaffolding protein	head and packaging
UniRef90	UHGV-0146883_31	UniRef90_UPI001D14C9C8	229.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0146883_31	476272.RUMHYD_01775	166.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0146883_31	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0146883_31	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_32	phrog_247	235.7	0	major head protein	head and packaging
UniRef90	UHGV-0146883_32	UniRef90_UPI001BA5448B	265.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0146883_32	33035.JPJF01000106_gene3132	459.0	0	N/A	N/A
structural_annotation	UHGV-0146883_32	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_34	phrog_541	98.4	4.2e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0146883_34	476272.RUMHYD_01778	135.0	3.08e-38	N/A	N/A
PHROG	UHGV-0146883_35	phrog_1233	94.3	1.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0146883_35	476272.RUMHYD_01960	100.0	7.72e-26	N/A	N/A
PHROG	UHGV-0146883_36	phrog_1129	72.5	4.2e-21	holin	lysis
UniRef90	UHGV-0146883_36	UniRef90_A0A417JD09	150.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0146883_36	411461.DORFOR_00721	128.0	1.07e-37	N/A	N/A
Pfam	UHGV-0146883_36	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0146883_36	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_37	phrog_8680	242.6	0	N/A	unknown function
UniRef90	UHGV-0146883_37	UniRef90_UPI0015711ED3	463.0	0	N/A	N/A
eggNOG-mapper	UHGV-0146883_37	411470.RUMGNA_02208	311.0	0	N/A	N/A
Pfam	UHGV-0146883_37	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0146883_37	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_39	phrog_3366	96.9	1.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0146883_39	476272.RUMHYD_01779	154.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0146883_39	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_40	phrog_556	55.9	5.3e-16	minor head protein	head and packaging
UniRef90	UHGV-0146883_40	UniRef90_UPI0008B4CFF0	224.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0146883_40	476272.RUMHYD_01780	165.0	0	N/A	N/A
structural_annotation	UHGV-0146883_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_41	phrog_3266	100.7	1.1e-29	tail completion	connector
eggNOG-mapper	UHGV-0146883_41	476272.RUMHYD_01781	160.0	0	N/A	N/A
structural_annotation	UHGV-0146883_41	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_42	phrog_3099	126.6	1.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0146883_42	1120746.CCNL01000014_gene2102	124.0	1.26e-33	N/A	N/A
structural_annotation	UHGV-0146883_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_43	phrog_11299	124.1	8.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-0146883_43	411459.RUMOBE_01382	67.8	0.00000000000254	N/A	N/A
structural_annotation	UHGV-0146883_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_44	phrog_706	130.2	1.5e-38	N/A	unknown function
UniRef90	UHGV-0146883_44	UniRef90_A0A1I0K8S4	190.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0146883_44	411902.CLOBOL_00127	181.0	0	N/A	N/A
Pfam	UHGV-0146883_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0146883_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_45	phrog_37543	722.3	0	N/A	unknown function
UniRef90	UHGV-0146883_45	UniRef90_UPI001DBC5439	301.0	0	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-0146883_45	1298920.KI911353_gene2068	187.0	0	domain protein	N/A
COG	UHGV-0146883_45	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_46	phrog_1194	51.2	0.000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0146883_46	411902.CLOBOL_00125	125.0	4.5e-35	N/A	N/A
structural_annotation	UHGV-0146883_46	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_47	phrog_32744	166.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0146883_47	411902.CLOBOL_00124	468.0	0	N/A	N/A
structural_annotation	UHGV-0146883_47	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0146883_48	phrog_18725	58.1	1.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0146883_48	411902.CLOBOL_00123	130.0	6.39e-37	N/A	N/A