UHGV-0148792 (vOTU-009100)

Viral Genome: UHGV-0148792

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0148792
vOTU ID	vOTU-009100
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_401059
Associated BioSample	SAMN05356882
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9716
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.18
Jumbo phage	No

Genome content
Genome length (bp)	38,626
GC content	56.13%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	61
CDS density	90%
Average CDS length (bps)	567.79
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0148792_2	PF01719	N/A	N/A	Plasmid replication protein	Rep_2
UniRef90	UHGV-0148792_5	UniRef90_A0A355W634	253.0	0	Zot domain-containing protein	N/A
KOfam	UHGV-0148792_7	K07482	271.5	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-0148792_7	phrog_4646	280.9	0	transposase	integration and excision
UniRef90	UHGV-0148792_7	UniRef90_A0A3D4E163	474.0	0	IS30 family transposase	N/A
eggNOG-mapper	UHGV-0148792_7	411459.RUMOBE_01705	211.0	0	COG COG2826 Transposase and inactivated derivatives, IS30 family	N/A
Pfam	UHGV-0148792_7	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
NCBIFam	UHGV-0148792_7	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-0148792_7	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-0148792_7	PF13358,PF13384,NF033563,COG2826	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0148792_8	411471.SUBVAR_06995	60.1	0.0000000569	N/A	N/A
COG	UHGV-0148792_8	COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0148792_11	K06400	366.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0148792_11	phrog_95	370.8	0	integrase	integration and excision
UniRef90	UHGV-0148792_11	UniRef90_UPI001D0F283A	614.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0148792_11	718252.FP2_01160	590.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0148792_11	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0148792_11	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0148792_11	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0148792_11	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0148792_11	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_12	phrog_38135	69.2	4.4e-20	N/A	unknown function
UniRef90	UHGV-0148792_12	UniRef90_A0A1Q6T359	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-0148792_12	411471.SUBVAR_05869	73.2	0.0000000000014	repeat protein	N/A
Pfam	UHGV-0148792_12	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-0148792_12	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-0148792_12	PF14020	N/A	N/A	N/A	N/A
KOfam	UHGV-0148792_13	K01356	145.1	7.90332e-43	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0148792_13	phrog_4	117.8	1.3e-34	transcriptional repressor	transcription regulation
UniRef90	UHGV-0148792_13	UniRef90_A0A1Q6T3E1	294.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0148792_13	411483.FAEPRAA2165_03041	171.0	0	N/A	N/A
Pfam	UHGV-0148792_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0148792_13	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0148792_13	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0148792_13	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-0148792_14	K22300	44.9	0.0000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0148792_14	phrog_8	44.8	0.0000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-0148792_14	UniRef90_A0A367GFH2	104.0	4.05e-28	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0148792_14	796942.HMPREF9623_01770	57.8	0.00000000608	N/A	N/A
Pfam	UHGV-0148792_14	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-0148792_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0148792_14	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_27	phrog_3584	206.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148792_27	UniRef90_UPI001C02C5E0	160.0	3.08286e-44	N/A	N/A
eggNOG-mapper	UHGV-0148792_27	718252.FP2_16510	146.0	1.1e-39	N/A	N/A
structural_annotation	UHGV-0148792_27	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_28	phrog_36399	52.0	0.000000000000015	N/A	unknown function
PHROG	UHGV-0148792_29	phrog_8470	272.4	0	N/A	unknown function
UniRef90	UHGV-0148792_29	UniRef90_UPI0019580896	186.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0148792_29	1226322.HMPREF1545_00100	190.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0148792_29	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
PHROG	UHGV-0148792_30	phrog_15609	65.1	7.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0148792_30	641112.ACOK01000073_gene2872	62.8	0.0000000156	N/A	N/A
structural_annotation	UHGV-0148792_30	PF11300,NF038070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0148792_33	693746.OBV_18010	81.3	2.97e-17	N/A	N/A
structural_annotation	UHGV-0148792_33	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_35	phrog_338	60.7	3.3e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148792_35	UniRef90_UPI0015F33F36	174.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0148792_35	748224.HMPREF9436_01465	175.0	0	N/A	N/A
PHROG	UHGV-0148792_36	phrog_1066	57.6	2.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0148792_36	445975.COLSTE_02166	77.0	3.98e-16	N/A	N/A
AcrCatalog	UHGV-0148792_36	cluster_154855	71.2	2.68e-18	NA	N/A
PHROG	UHGV-0148792_37	phrog_9	139.7	2.4e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0148792_37	UniRef90_UPI001D0087E2	459.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0148792_37	1410630.JNKP01000001_gene1822	627.0	0	phage terminase, large subunit	N/A
COG	UHGV-0148792_37	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0148792_37	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_38	phrog_104	211.8	0	portal protein	head and packaging
UniRef90	UHGV-0148792_38	UniRef90_A0A3E2U200	750.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0148792_38	748224.HMPREF9436_01468	763.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0148792_38	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_39	phrog_193	126.3	2e-37	head maturation protease	head and packaging
UniRef90	UHGV-0148792_39	UniRef90_A0A6N8H118	367.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0148792_39	748224.HMPREF9436_01469	400.0	0	N/A	N/A
COG	UHGV-0148792_39	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-0148792_41	phrog_194	84.5	1.7e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-0148792_41	UniRef90_D4K444	153.0	3.64338e-44	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0148792_41	748224.HMPREF9436_03336	157.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0148792_41	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0148792_41	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_42	phrog_10	139.5	3.09995e-41	major head protein	head and packaging
UniRef90	UHGV-0148792_42	UniRef90_A0A1Y4TJU9	513.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0148792_42	748224.HMPREF9436_00690	445.0	0	Phage capsid family	N/A
Pfam	UHGV-0148792_42	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0148792_42	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0148792_42	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0148792_42	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_44	phrog_137	54.2	0.0000000000000018	head-tail adaptor Ad1	connector
UniRef90	UHGV-0148792_44	UniRef90_E2ZGA8	162.0	0	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-0148792_44	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_45	phrog_501	73.2	3.7e-21	head closure Hc1	connector
eggNOG-mapper	UHGV-0148792_45	748224.HMPREF9436_00693	170.0	0	N/A	N/A
structural_annotation	UHGV-0148792_45	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_46	phrog_387	60.3	2.9e-17	neck protein	connector
eggNOG-mapper	UHGV-0148792_46	748224.HMPREF9436_00694	92.0	2.56e-23	N/A	N/A
PHROG	UHGV-0148792_47	phrog_123	64.5	1.9e-18	tail terminator	connector
UniRef90	UHGV-0148792_47	UniRef90_A0A2A5RIK6	82.0	6.18e-18	N/A	N/A
eggNOG-mapper	UHGV-0148792_47	1231377.C426_1732	84.0	1.82e-19	N/A	N/A
structural_annotation	UHGV-0148792_47	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_48	phrog_117	175.1	0	major tail protein	tail
UniRef90	UHGV-0148792_48	UniRef90_A0A1Q6T308	230.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0148792_48	748224.HMPREF9436_00696	213.0	0	domain, Protein	N/A
COG	UHGV-0148792_48	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0148792_48	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_49	phrog_1526	83.5	1.9e-24	N/A	unknown function
UniRef90	UHGV-0148792_49	UniRef90_D2BQF7	68.9	0.000000000000213	N/A	N/A
eggNOG-mapper	UHGV-0148792_49	879308.HMPREF9130_1240	81.6	4.35e-19	N/A	N/A
PHROG	UHGV-0148792_50	phrog_1633	70.7	7e-21	N/A	unknown function
UniRef90	UHGV-0148792_50	UniRef90_UPI000986795C	73.2	0.0000000000000253	N/A	N/A
eggNOG-mapper	UHGV-0148792_50	883110.HMPREF9260_00651	63.9	0.0000000000169	N/A	N/A
structural_annotation	UHGV-0148792_50	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_51	phrog_6900	258.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0148792_51	UniRef90_A0A1C5MMN2	395.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0148792_51	1280698.AUJS01000007_gene1047	385.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0148792_51	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0148792_51	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_52	phrog_1194	41.5	0.000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0148792_52	411471.SUBVAR_06933	103.0	7.69e-27	N/A	N/A
structural_annotation	UHGV-0148792_52	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_53	phrog_18190	83.0	3e-32	N/A	unknown function
eggNOG-mapper	UHGV-0148792_53	411471.SUBVAR_06932	313.0	0	N/A	N/A
structural_annotation	UHGV-0148792_53	PF05954,PF00629,PF03424,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_54	phrog_18444	79.4	2.9e-23	N/A	unknown function
UniRef90	UHGV-0148792_54	UniRef90_UPI0011788049	50.1	0.00000121	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0148792_54	1294142.CINTURNW_1707	58.9	0.0000000000598	N/A	N/A
structural_annotation	UHGV-0148792_56	PF12245	N/A	N/A	N/A	N/A
KOfam	UHGV-0148792_58	K07273	177.8	0	acm; lysozyme	N/A
PHROG	UHGV-0148792_58	phrog_291	152.7	2.8026e-45	endolysin	lysis
UniRef90	UHGV-0148792_58	UniRef90_A0A367G061	522.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0148792_58	411471.SUBVAR_06927	316.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0148792_58	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0148792_58	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0148792_58	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0148792_58	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_59	phrog_355	59.4	6.6e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148792_59	UniRef90_UPI00156F0E9C	137.0	5.21e-40	N/A	N/A
eggNOG-mapper	UHGV-0148792_59	411473.RUMCAL_00360	128.0	1.64e-37	N/A	N/A
structural_annotation	UHGV-0148792_59	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0148792_60	phrog_4105	77.4	1.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0148792_60	657322.FPR_27220	85.5	1.46e-19	N/A	N/A
PHROG	UHGV-0148792_61	phrog_1129	62.7	4.7e-18	holin	lysis
UniRef90	UHGV-0148792_61	UniRef90_A0A367FT42	172.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0148792_61	1007096.BAGW01000036_gene2663	114.0	4.73e-32	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0148792_61	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0148792_61	PF06946	N/A	N/A	N/A	N/A