UHGV-0150671 (vOTU-046144)

Viral Genome: UHGV-0150671

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0150671
vOTU ID	vOTU-046144
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_422735
Associated BioSample	SAMN05826944
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9796
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.03
Jumbo phage	No

Genome content
Genome length (bp)	33,726
GC content	59.78%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	94%
Average CDS length (bps)	573.44
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0150671_2	phrog_119	71.6	1e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150671_2	UniRef90_G9YSB5	149.0	1.4013e-44	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_2	1235792.C808_00081	82.8	5.64e-19	HNH nucleases	N/A
Pfam	UHGV-0150671_2	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0150671_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0150671_3	UniRef90_UPI001D014F8E	72.8	0.00000000000000121	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_3	1226322.HMPREF1545_00110	68.6	0.0000000000000123	Cysteine-rich KTR	N/A
Pfam	UHGV-0150671_3	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0150671_3	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_4	phrog_3584	75.1	1.1e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0150671_4	742738.HMPREF9460_04063	242.0	0	N/A	N/A
structural_annotation	UHGV-0150671_4	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_9	phrog_38832	64.0	1.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0150671_9	665956.HMPREF1032_03087	51.6	0.00000522	N/A	N/A
KOfam	UHGV-0150671_14	K03497	77.7	2.3e-22	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0150671_14	phrog_27290	331.7	0	N/A	unknown function
UniRef90	UHGV-0150671_14	UniRef90_G4L1G7	294.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_14	693746.OBV_19860	294.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0150671_14	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0150671_14	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0150671_14	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_15	K03496	181.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0150671_15	phrog_164	140.0	1.70006e-41	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150671_15	UniRef90_UPI000318E277	296.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0150671_15	1007096.BAGW01000033_gene1614	286.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0150671_15	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0150671_15	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0150671_15	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_17	K02314	256.9	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0150671_17	phrog_19	222.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150671_17	UniRef90_U2SBV6	296.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0150671_17	1226322.HMPREF1545_00095	296.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0150671_17	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0150671_17	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0150671_17	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0150671_17	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_18	phrog_270	116.8	2.6e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150671_18	UniRef90_UPI001F170B82	184.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_18	742738.HMPREF9460_00851	168.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0150671_18	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0150671_18	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0150671_18	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0150671_19	PF21327	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_21	K22300	41.7	0.000000000021	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0150671_21	phrog_6499	120.6	6.6e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-0150671_21	UniRef90_G9YL68	140.0	7.48001e-40	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0150671_21	742738.HMPREF9460_00847	140.0	8.75994e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0150671_21	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0150671_21	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0150671_21	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_22	K22300	58.5	1.6e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0150671_22	phrog_8	41.7	0.000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0150671_22	UniRef90_UPI000F0D19B9	54.3	0.0000000308	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_22	1408415.JHXL01000001_gene419	51.6	0.0000008	sequence-specific DNA binding	N/A
Pfam	UHGV-0150671_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0150671_22	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0150671_22	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0150671_23	UniRef90_A0A1V0QCA0	84.3	6.67e-20	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0150671_23	1226322.HMPREF1545_02466	84.0	1.59e-20	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-0150671_23	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0150671_24	PF14947,NF041230,COG3432	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_26	K02342	145.9	2.8026e-43	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0150671_26	phrog_192	131.9	3.9e-39	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150671_26	UniRef90_UPI001873C260	144.0	2.1e-36	3'-5' exoribonuclease	N/A
eggNOG-mapper	UHGV-0150671_26	1410674.JNKU01000049_gene1948	105.0	2.56e-23	EXOIII	N/A
PADLOC	UHGV-0150671_26	cd06127	115.6	7.3e-34	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0150671_26	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0150671_26	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0150671_26	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0150671_26	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0150671_27	UniRef90_A0A1Y3ZTC9	104.0	7.24e-27	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0150671_27	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0150671_27	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0150671_27	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0150671_29	TIGR04165,COG3478	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_30	K14059	144.3	1.3999e-42	int; integrase	N/A
PHROG	UHGV-0150671_30	phrog_1	145.2	5.395e-43	integrase	integration and excision
UniRef90	UHGV-0150671_30	UniRef90_UPI001EDEB0AD	271.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0150671_30	1226322.HMPREF1545_00144	245.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0150671_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0150671_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0150671_30	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_31	K07726	41.2	0.00000000003	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0150671_31	phrog_25567	61.9	8e-18	N/A	unknown function
UniRef90	UHGV-0150671_31	UniRef90_UPI00164AED9E	133.0	4.86e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_31	1235798.C817_04600	95.5	8.42e-24	N/A	N/A
Pfam	UHGV-0150671_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0150671_31	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_35	K01448	49.4	0.000000000000072	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0150671_35	phrog_435	71.2	2e-20	endolysin	lysis
UniRef90	UHGV-0150671_35	UniRef90_A0A810PUG7	207.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_35	411473.RUMCAL_02267	97.8	3.85e-21	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0150671_35	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0150671_35	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0150671_35	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0150671_35	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_36	phrog_881	90.2	1.2e-26	holin	lysis
UniRef90	UHGV-0150671_36	UniRef90_UPI00189D3A4F	85.5	1.61e-20	phage holin	N/A
eggNOG-mapper	UHGV-0150671_36	742740.HMPREF9474_02251	82.4	4.96e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-0150671_36	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0150671_36	PF16938	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0150671_38	PF08481,NF033814,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_39	phrog_4105	99.1	2.8e-29	N/A	unknown function
UniRef90	UHGV-0150671_39	UniRef90_A0A8D9UHA9	140.0	3.20001e-41	Holin protein	N/A
eggNOG-mapper	UHGV-0150671_39	742733.HMPREF9469_05011	117.0	5.98e-33	N/A	N/A
eggNOG-mapper	UHGV-0150671_40	2754.EH55_00535	61.6	0.000000151	N/A	N/A
structural_annotation	UHGV-0150671_40	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_41	phrog_1067	270.6	0	minor head protein	head and packaging
UniRef90	UHGV-0150671_41	UniRef90_A0A7G9G6Y3	389.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0150671_41	1123263.AUKY01000068_gene489	304.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0150671_41	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0150671_41	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0150671_41	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0150671_41	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_42	phrog_33	59.5	9.2e-17	distal tail protein Dit	tail
UniRef90	UHGV-0150671_42	UniRef90_A0A173Z1X4	177.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0150671_42	536233.CLO_0897	94.0	1.45e-20	tail component	N/A
COG	UHGV-0150671_42	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0150671_42	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_43	phrog_6900	251.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0150671_43	UniRef90_A0A373CK98	298.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-0150671_43	1216932.CM240_0625	320.0	0	tape measure	N/A
COG	UHGV-0150671_43	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0150671_43	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_46	phrog_88	92.4	5.3e-27	major tail protein	tail
UniRef90	UHGV-0150671_46	UniRef90_A0A1C6CIL7	130.0	1.64e-33	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0150671_46	33035.JPJF01000039_gene278	69.3	0.0000000000079	N/A	N/A
NCBIFam	UHGV-0150671_46	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0150671_46	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_47	phrog_5	42.7	0.000000000012	tail completion or Neck1 protein	connector
UniRef90	UHGV-0150671_47	UniRef90_A0A1C6FG30	137.0	2.59e-38	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0150671_47	908340.HMPREF9406_2573	132.0	3.37e-37	N/A	N/A
structural_annotation	UHGV-0150671_47	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0150671_48	999413.HMPREF1094_02005	80.5	4.49e-18	N/A	N/A
structural_annotation	UHGV-0150671_48	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_49	phrog_19734	117.6	7.6e-35	N/A	unknown function
UniRef90	UHGV-0150671_49	UniRef90_A0A6I7GNS7	125.0	2.36e-34	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0150671_49	1235798.C817_04587	61.2	0.000000000227	N/A	N/A
structural_annotation	UHGV-0150671_49	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_50	phrog_749	69.0	6.3e-20	N/A	unknown function
UniRef90	UHGV-0150671_50	UniRef90_UPI001C0FB8A8	56.6	0.0000000218	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0150671_50	349161.Dred_2603	80.9	1.35e-18	N/A	N/A
PHROG	UHGV-0150671_51	phrog_10	135.9	4.6e-40	major head protein	head and packaging
UniRef90	UHGV-0150671_51	UniRef90_G9YSC0	696.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0150671_51	1235792.C808_00086	422.0	0	Phage capsid family	N/A
Pfam	UHGV-0150671_51	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0150671_51	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0150671_51	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0150671_51	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0150671_51	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0150671_52	K01358	135.3	6.4e-40	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0150671_52	phrog_94	249.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0150671_52	UniRef90_A0A1Y4BT12	355.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0150671_52	349161.Dred_2605	310.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0150671_52	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0150671_52	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0150671_52	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_53	phrog_12	113.7	5.9e-34	portal protein	head and packaging
UniRef90	UHGV-0150671_53	UniRef90_UPI0018755FA4	507.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0150671_53	610130.Closa_0742	293.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0150671_53	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0150671_53	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0150671_53	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0150671_53	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0150671_54	phrog_9	244.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0150671_54	UniRef90_UPI0018737C02	902.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0150671_54	1235792.C808_00083	595.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0150671_54	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0150671_54	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0150671_54	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0150671_54	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0150671_55	UniRef90_UPI00195E8788	89.7	1.22e-21	P27 family phage terminase small subunit	N/A
structural_annotation	UHGV-0150671_55	PF05119,COG3747	N/A	N/A	N/A	N/A