UHGV-0150862 (vOTU-079159)

Viral Genome: UHGV-0150862

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0150862
vOTU ID	vOTU-079159
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_424052
Associated BioSample	SAMN05827012
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.95 (High-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9793
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.12
Jumbo phage	No

Genome content
Genome length (bp)	38,200
GC content	36.96%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	92%
Average CDS length (bps)	663.74
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0150862_1	K07273	100.4	2.4e-29	acm; lysozyme	N/A
PHROG	UHGV-0150862_1	phrog_291	84.9	1.3e-24	endolysin	lysis
UniRef90	UHGV-0150862_1	UniRef90_A0A174PB89	349.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-0150862_1	515620.EUBELI_01316	113.0	1.74e-25	Glycoside Hydrolase Family 25-like lysozyme endolysin	N/A
Pfam	UHGV-0150862_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0150862_1	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0150862_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
PHROG	UHGV-0150862_2	phrog_1129	76.1	3.2e-22	holin	lysis
UniRef90	UHGV-0150862_2	UniRef90_UPI000E5CE6BF	159.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0150862_2	411461.DORFOR_00721	100.0	7.96e-27	N/A	N/A
Pfam	UHGV-0150862_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0150862_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_3	phrog_1863	54.9	1.4e-16	N/A	unknown function
UniRef90	UHGV-0150862_3	UniRef90_UPI001D0865D2	83.2	3.17e-19	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0150862_3	1226322.HMPREF1545_04027	83.6	2.94e-20	N/A	N/A
eggNOG-mapper	UHGV-0150862_4	536227.CcarbDRAFT_4479	53.5	0.000000188	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0150862_4	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
COG	UHGV-0150862_4	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
PHROG	UHGV-0150862_7	phrog_2566	45.8	0.00000000000095	N/A	unknown function
PHROG	UHGV-0150862_8	phrog_6616	158.0	0	tail protein	tail
UniRef90	UHGV-0150862_8	UniRef90_A0A8D9PGP3	749.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0150862_8	1499683.CCFF01000014_gene3896	276.0	0	Phage minor structural protein	N/A
COG	UHGV-0150862_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0150862_8	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_9	phrog_1401	66.5	3.9e-19	N/A	unknown function
UniRef90	UHGV-0150862_9	UniRef90_UPI00129D2DCF	66.6	0.0000000000196	N/A	N/A
eggNOG-mapper	UHGV-0150862_9	1294142.CINTURNW_1705	60.8	0.000000000553	N/A	N/A
structural_annotation	UHGV-0150862_9	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_10	phrog_1194	82.4	4.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0150862_10	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-0150862_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_11	phrog_1535	283.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0150862_11	UniRef90_R6TDK7	350.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0150862_11	33035.JPJF01000093_gene2243	341.0	0	phage tail tape measure protein	N/A
COG	UHGV-0150862_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0150862_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_12	phrog_8355	117.5	2.5e-35	N/A	unknown function
UniRef90	UHGV-0150862_12	UniRef90_UPI0006BBA9AA	175.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0150862_12	1117108.PAALTS15_13522	117.0	2.33e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0150862_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0150862_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_13	phrog_8300	67.4	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0150862_13	1151292.QEW_2425	60.8	0.000000000154	N/A	N/A
structural_annotation	UHGV-0150862_13	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_14	phrog_820	117.7	7.1e-35	major tail protein	tail
UniRef90	UHGV-0150862_14	UniRef90_T3DDR1	171.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0150862_14	1151292.QEW_2426	171.0	0	N/A	N/A
structural_annotation	UHGV-0150862_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_15	phrog_2595	79.6	3.6e-23	head-tail connector protein	connector
UniRef90	UHGV-0150862_15	UniRef90_UPI001D068DAC	136.0	9.25e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-0150862_15	742740.HMPREF9474_03510	124.0	7.84e-35	N/A	N/A
Pfam	UHGV-0150862_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0150862_15	PF12691	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0150862_16	742740.HMPREF9474_03509	127.0	1.4e-35	N/A	N/A
PHROG	UHGV-0150862_17	phrog_8710	117.2	7.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0150862_17	33035.JPJF01000093_gene2249	105.0	5.65e-28	N/A	N/A
structural_annotation	UHGV-0150862_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_18	phrog_541	68.9	7.7e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0150862_18	483218.BACPEC_01153	146.0	7.14662e-44	N/A	N/A
PHROG	UHGV-0150862_20	phrog_422	205.8	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0150862_20	693746.OBV_18090	217.0	0	N/A	N/A
structural_annotation	UHGV-0150862_20	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_21	phrog_2303	138.6	4.30002e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0150862_21	483218.BACPEC_01156	139.0	4.75e-38	N/A	N/A
PHROG	UHGV-0150862_22	phrog_872	168.7	0	N/A	unknown function
UniRef90	UHGV-0150862_22	UniRef90_A0A413P9Z7	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-0150862_22	573413.Spirs_2170	178.0	0	N/A	N/A
Pfam	UHGV-0150862_22	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0150862_22	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0150862_22	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_24	phrog_581	243.4	0	minor head protein	head and packaging
UniRef90	UHGV-0150862_24	UniRef90_A0A413YU28	998.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0150862_24	1282664.H354_06636	472.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0150862_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-0150862_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_25	phrog_533	275.3	0	portal protein	head and packaging
UniRef90	UHGV-0150862_25	UniRef90_A0A3D5LTG9	963.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0150862_25	33035.JPJF01000093_gene2257	573.0	0	N/A	N/A
structural_annotation	UHGV-0150862_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0150862_26	K06909	102.8	4.2e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0150862_26	phrog_2	75.4	1.2e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0150862_26	UniRef90_A0A413YU24	921.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0150862_26	1391647.AVSV01000003_gene1802	520.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0150862_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0150862_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0150862_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0150862_27	K07474	167.2	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0150862_27	phrog_51	171.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0150862_27	UniRef90_A0A413YU49	329.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0150862_27	1499683.CCFF01000014_gene3916	158.0	0	Terminase small subunit	N/A
Pfam	UHGV-0150862_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0150862_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0150862_27	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_29	phrog_36	61.4	1.7e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0150862_29	397290.C810_01391	102.0	9.36e-26	N/A	N/A
structural_annotation	UHGV-0150862_29	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_30	phrog_625	66.8	1.6e-19	N/A	unknown function
UniRef90	UHGV-0150862_30	UniRef90_A0A413YU40	224.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_30	397290.C810_01502	125.0	3.75e-35	N/A	N/A
structural_annotation	UHGV-0150862_30	PF12961,COG2028	N/A	N/A	N/A	N/A
KOfam	UHGV-0150862_33	K07451	40.3	0.00000000005	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0150862_33	phrog_2118	123.6	1.6e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150862_33	UniRef90_R5ZJF1	284.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0150862_33	610130.Closa_0730	127.0	3.29e-36	HNH endonuclease	N/A
Pfam	UHGV-0150862_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0150862_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0150862_34	UniRef90_UPI001D072F7E	66.6	0.000000000163	N/A	N/A
eggNOG-mapper	UHGV-0150862_34	397290.C810_01492	62.0	0.000000000816	N/A	N/A
PHROG	UHGV-0150862_37	phrog_15077	92.1	1.1e-26	N/A	unknown function
UniRef90	UHGV-0150862_37	UniRef90_A0A3A6HZA9	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0150862_37	483218.BACPEC_01165	227.0	0	N/A	N/A
structural_annotation	UHGV-0150862_37	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_38	phrog_8470	171.3	0	N/A	unknown function
UniRef90	UHGV-0150862_38	UniRef90_UPI0018999714	664.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_38	742733.HMPREF9469_00219	379.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0150862_38	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0150862_38	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_39	phrog_4433	72.2	3.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0150862_39	742733.HMPREF9469_00220	126.0	3.39e-34	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0150862_39	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0150862_39	PF12120,NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0150862_40	1280698.AUJS01000007_gene1016	158.0	0	N/A	N/A
KOfam	UHGV-0150862_42	K03469	61.3	2.1e-17	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0150862_42	phrog_531	59.6	6e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150862_42	UniRef90_A0A413YU26	314.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_42	411902.CLOBOL_05701	126.0	2.46e-35	RNase H	N/A
Pfam	UHGV-0150862_42	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0150862_42	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0150862_42	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_43	phrog_3584	241.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0150862_43	UniRef90_A0A4P8IFK4	343.0	0	N/A	N/A
eggNOG-mapper	UHGV-0150862_43	742741.HMPREF9475_00404	296.0	0	N/A	N/A
structural_annotation	UHGV-0150862_43	PF21578	N/A	N/A	N/A	N/A
UniRef90	UHGV-0150862_44	UniRef90_A0A356C6A4	152.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_44	318464.IO99_13850	63.2	0.00000000000309	Helix-turn-helix domain	N/A
Pfam	UHGV-0150862_44	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0150862_44	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0150862_44	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0150862_45	COG1321	N/A	N/A	N/A	N/A
UniRef90	UHGV-0150862_46	UniRef90_A0A3B9CCY2	98.6	7.25e-26	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0150862_46	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0150862_47	K22299	69.7	6.2e-20	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0150862_47	phrog_8	77.2	2.8e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0150862_47	UniRef90_A0A828T008	150.0	2.8026e-45	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_47	411470.RUMGNA_03101	87.4	4.58e-21	transcriptional regulator, XRE family	N/A
PADLOC	UHGV-0150862_47	retron_type_VI_hth_cluster2_1	52.8	0.00000000000001	N/A	Retron
Pfam	UHGV-0150862_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0150862_47	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0150862_47	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_48	phrog_87	85.1	6.8e-25	metallo-protease	other
UniRef90	UHGV-0150862_48	UniRef90_A0A3B9CDB4	199.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_48	1235792.C808_05259	172.0	0	Zn peptidase	N/A
Pfam	UHGV-0150862_48	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0150862_48	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0150862_48	PF06114,COG3800	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_49	phrog_1847	512.0	0	N/A	unknown function
UniRef90	UHGV-0150862_49	UniRef90_R9JJN1	484.0	0	T5orf172 domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_49	1235792.C808_05258	484.0	0	N/A	N/A
Pfam	UHGV-0150862_49	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-0150862_49	PF10544	N/A	N/A	T5orf172 domain	T5orf172
COG	UHGV-0150862_49	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-0150862_49	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0150862_50	658655.HMPREF0988_00902	50.1	0.0000000733	N/A	N/A
PHROG	UHGV-0150862_51	phrog_27728	52.3	0.0000000000000086	N/A	unknown function
UniRef90	UHGV-0150862_51	UniRef90_A0A0N9YRJ3	64.7	0.0000000000873	FlgT_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0150862_51	875454.BAEW01000002_gene513	70.1	0.000000000000101	N/A	N/A
AcrCatalog	UHGV-0150862_51	cluster_25916	64.7	4.05e-16	NA	N/A
structural_annotation	UHGV-0150862_51	PF16538	N/A	N/A	N/A	N/A
PHROG	UHGV-0150862_52	phrog_2158	180.6	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0150862_52	UniRef90_A0A1M4WG46	341.0	0	Abortive infection bacteriophage resistance protein	N/A
eggNOG-mapper	UHGV-0150862_52	875454.BAEW01000002_gene514	204.0	0	Abi-like protein	N/A
PADLOC	UHGV-0150862_52	AbiD	118.9	8.7e-35	AbiD	Abi
Pfam	UHGV-0150862_52	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0150862_52	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
KOfam	UHGV-0150862_53	K14059	220.4	0	int; integrase	N/A
PHROG	UHGV-0150862_53	phrog_1	207.5	0	integrase	integration and excision
UniRef90	UHGV-0150862_53	UniRef90_R6AKI6	818.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-0150862_53	536233.CLO_0855	394.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-0150862_53	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0150862_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0150862_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0150862_53	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A