UHGV-0151320 (vOTU-027482)

Viral Genome: UHGV-0151320

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0151320
vOTU ID	vOTU-027482
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_480608
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	64.83 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.19
Jumbo phage	No

Genome content
Genome length (bp)	27,116
GC content	54.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	97%
Average CDS length (bps)	608.86
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 64.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0151320_1	1226322.HMPREF1545_00079	111.0	2.42e-30	N/A	N/A
structural_annotation	UHGV-0151320_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_3	phrog_20016	190.3	0	N/A	unknown function
UniRef90	UHGV-0151320_3	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0151320_3	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-0151320_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_5	phrog_16490	115.5	5.2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0151320_5	1408437.JNJN01000043_gene803	139.0	1.53e-37	N/A	N/A
PHROG	UHGV-0151320_6	phrog_22984	72.4	3.1e-22	N/A	unknown function
PHROG	UHGV-0151320_7	phrog_21718	100.4	1.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-0151320_7	397290.C810_05210	65.9	0.0000000000294	N/A	N/A
PHROG	UHGV-0151320_8	phrog_3754	93.8	1.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-0151320_8	476272.RUMHYD_01764	160.0	0	N/A	N/A
structural_annotation	UHGV-0151320_9	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_10	phrog_14030	146.1	2.29813e-43	N/A	unknown function
UniRef90	UHGV-0151320_10	UniRef90_R6LL81	239.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0151320_10	1121866.AUGK01000003_gene1444	93.6	3.74e-19	amidase activity	N/A
COG	UHGV-0151320_10	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0151320_11	phrog_6918	96.6	1.7e-28	holin	lysis
UniRef90	UHGV-0151320_11	UniRef90_A0A316QCY7	101.0	7e-26	Holin	N/A
eggNOG-mapper	UHGV-0151320_11	1297617.JPJD01000020_gene301	100.0	4.89e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0151320_11	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0151320_11	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_14	phrog_35892	52.4	0.000000000000003	N/A	unknown function
Pfam	UHGV-0151320_14	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0151320_14	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0151320_14	PF13306	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0151320_15	411471.SUBVAR_06929	320.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0151320_15	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
Pfam	UHGV-0151320_16	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-0151320_16	COG4447	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151320_16	PF07484	N/A	N/A	N/A	N/A
Pfam	UHGV-0151320_17	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0151320_17	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_18	phrog_18725	95.3	6.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0151320_18	693746.OBV_18220	132.0	3.01e-37	N/A	N/A
structural_annotation	UHGV-0151320_20	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_21	phrog_13879	208.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0151320_21	693746.OBV_18210	379.0	0	N/A	N/A
structural_annotation	UHGV-0151320_21	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_22	phrog_1194	79.7	3.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0151320_22	411902.CLOBOL_00125	115.0	1.57e-31	N/A	N/A
structural_annotation	UHGV-0151320_22	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_23	phrog_1535	116.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0151320_23	UniRef90_A0A810PX76	243.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0151320_23	1235797.C816_04182	405.0	0	SLT domain	N/A
COG	UHGV-0151320_23	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151320_23	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_24	phrog_806	89.4	3.5e-26	N/A	unknown function
UniRef90	UHGV-0151320_24	UniRef90_UPI00137B5163	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0151320_24	476272.RUMHYD_01730	115.0	2.39e-28	N/A	N/A
Pfam	UHGV-0151320_24	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0151320_24	PF11611,PF06832,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_25	phrog_706	111.0	1.2e-32	N/A	unknown function
UniRef90	UHGV-0151320_25	UniRef90_UPI000682A80B	201.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0151320_25	693746.OBV_18170	200.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0151320_25	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0151320_25	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_26	phrog_11299	69.4	6.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0151320_26	693746.OBV_18160	197.0	0	N/A	N/A
structural_annotation	UHGV-0151320_26	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_27	phrog_3099	84.8	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0151320_27	1235797.C816_04186	233.0	0	N/A	N/A
structural_annotation	UHGV-0151320_27	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_28	phrog_3266	49.5	0.000000000000062	tail completion	connector
eggNOG-mapper	UHGV-0151320_28	1232443.BAIA02000078_gene24	171.0	0	N/A	N/A
structural_annotation	UHGV-0151320_28	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_29	phrog_556	68.1	1.3e-19	minor head protein	head and packaging
UniRef90	UHGV-0151320_29	UniRef90_UPI00195E1497	198.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0151320_29	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-0151320_29	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0151320_29	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_30	phrog_3366	101.1	1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0151320_30	1226322.HMPREF1545_00053	174.0	0	N/A	N/A
structural_annotation	UHGV-0151320_30	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_31	phrog_541	90.9	1.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0151320_31	663278.Ethha_0095	54.7	0.00000012	N/A	N/A
PHROG	UHGV-0151320_32	phrog_29	180.6	0	major head protein	head and packaging
UniRef90	UHGV-0151320_32	UniRef90_UPI0004AE1FFD	402.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0151320_32	1232443.BAIA02000078_gene29	402.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0151320_32	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0151320_32	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_33	phrog_909	57.8	1.5e-16	major head protein	head and packaging
UniRef90	UHGV-0151320_33	UniRef90_K1TUL5	77.8	0.00000000000000288	N/A	N/A
eggNOG-mapper	UHGV-0151320_33	1497679.EP56_02915	62.4	0.000000000267	N/A	N/A
Pfam	UHGV-0151320_33	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-0151320_33	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_34	phrog_194	100.5	2.2e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0151320_34	UniRef90_UPI00189CE417	177.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0151320_34	1232443.BAIA02000078_gene31	160.0	0	N/A	N/A
Pfam	UHGV-0151320_34	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0151320_34	PF06810,MF_02110	N/A	N/A	N/A	N/A
UniRef90	UHGV-0151320_36	UniRef90_R6AQU3	73.6	0.00000000000000121	Conserved protein	N/A
eggNOG-mapper	UHGV-0151320_36	1123489.AUAN01000010_gene361	90.5	8.6e-23	N/A	N/A
structural_annotation	UHGV-0151320_36	PF20111	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_37	phrog_581	58.3	1.3e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0151320_37	1232443.BAIA02000078_gene34	126.0	5.95e-35	cell adhesion	N/A
Pfam	UHGV-0151320_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0151320_37	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_38	phrog_374	202.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0151320_38	UniRef90_UPI0011CC6E20	189.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0151320_38	357276.EL88_11255	218.0	0	N/A	N/A
PHROG	UHGV-0151320_39	phrog_581	166.3	0	minor head protein	head and packaging
UniRef90	UHGV-0151320_39	UniRef90_UPI001D080D49	330.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0151320_39	1232443.BAIA02000078_gene35	294.0	0	N/A	N/A
Pfam	UHGV-0151320_39	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0151320_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151320_39	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0151320_40	phrog_533	310.6	0	portal protein	head and packaging
UniRef90	UHGV-0151320_40	UniRef90_UPI00189D71DB	587.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0151320_40	1232443.BAIA02000078_gene36	563.0	0	N/A	N/A
structural_annotation	UHGV-0151320_40	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0151320_41	K06909	132.8	3.8e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0151320_41	phrog_10250	162.1	0	N/A	unknown function
UniRef90	UHGV-0151320_41	UniRef90_UPI0018AC3323	577.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0151320_41	476272.RUMHYD_01756	447.0	0	N/A	N/A
Pfam	UHGV-0151320_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0151320_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0151320_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0151320_41	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0151320_42	K07474	103.9	3.2e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0151320_42	phrog_51	113.2	2.1e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0151320_42	UniRef90_A0A396NMY4	131.0	9.86e-37	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0151320_42	476272.RUMHYD_01754	125.0	2.14e-35	Terminase small subunit	N/A
Pfam	UHGV-0151320_42	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0151320_42	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0151320_42	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151320_43	PF10922,MF_00839	N/A	N/A	N/A	N/A