UHGV-0151990 (vOTU-046160)

Viral Genome: UHGV-0151990

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0151990
vOTU ID	vOTU-046160
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_470476
Associated BioSample	SAMN06112066
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9779
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.2
Jumbo phage	No

Genome content
Genome length (bp)	35,324
GC content	60.60%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	94%
Average CDS length (bps)	675.06
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0151990_1	phrog_2412	76.9	2.6e-22	N/A	unknown function
UniRef90	UHGV-0151990_1	UniRef90_A0A6Z7A1E4	62.0	0.00000000725	Stress-induced protein	N/A
eggNOG-mapper	UHGV-0151990_1	742738.HMPREF9460_02504	114.0	3.27e-30	N/A	N/A
KOfam	UHGV-0151990_2	K06909	91.6	1.2e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0151990_2	phrog_2	119.6	5e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0151990_2	UniRef90_A0A844EGH8	819.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0151990_2	1449050.JNLE01000003_gene3895	411.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0151990_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0151990_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0151990_2	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_3	phrog_533	266.2	0	portal protein	head and packaging
UniRef90	UHGV-0151990_3	UniRef90_A0A7G9WF85	357.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0151990_3	718252.FP2_06700	663.0	0	N/A	N/A
Pfam	UHGV-0151990_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0151990_3	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_4	phrog_581	350.0	0	minor head protein	head and packaging
UniRef90	UHGV-0151990_4	UniRef90_UPI001CBDED93	681.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0151990_4	748224.HMPREF9436_03339	672.0	0	N/A	N/A
Pfam	UHGV-0151990_4	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0151990_4	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151990_4	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_5	phrog_34144	69.2	4.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0151990_5	742742.HMPREF9452_00763	81.3	5.69e-20	N/A	N/A
PHROG	UHGV-0151990_7	phrog_194	78.7	1e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0151990_7	UniRef90_D4K444	256.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0151990_7	748224.HMPREF9436_03336	286.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0151990_7	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0151990_7	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_8	phrog_267	114.2	1.3e-33	major head protein	head and packaging
UniRef90	UHGV-0151990_8	UniRef90_A0A4P8IA69	366.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0151990_8	748224.HMPREF9436_03335	528.0	0	N/A	N/A
structural_annotation	UHGV-0151990_8	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_9	phrog_541	72.5	5.8e-21	head-tail adaptor	connector
PHROG	UHGV-0151990_10	phrog_3366	116.3	2.1e-34	N/A	unknown function
Pfam	UHGV-0151990_10	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0151990_10	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_11	phrog_556	86.4	2.5e-25	minor head protein	head and packaging
UniRef90	UHGV-0151990_11	UniRef90_D4K441	106.0	1.25e-26	Minor capsid	N/A
eggNOG-mapper	UHGV-0151990_11	718252.FP2_06630	106.0	2.1e-27	Minor capsid protein	N/A
Pfam	UHGV-0151990_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0151990_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_12	phrog_3266	101.6	5.4e-30	tail completion	connector
UniRef90	UHGV-0151990_12	UniRef90_A0A6B4JS53	58.9	0.0000000326	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0151990_12	718252.FP2_06620	124.0	3.39e-34	N/A	N/A
structural_annotation	UHGV-0151990_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_13	phrog_820	65.0	1.2e-18	major tail protein	tail
UniRef90	UHGV-0151990_13	UniRef90_A0A174M1L1	138.0	1.84e-37	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0151990_13	748224.HMPREF9436_03330	164.0	0	N/A	N/A
structural_annotation	UHGV-0151990_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151990_14	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_15	phrog_706	102.4	4.3e-30	N/A	unknown function
UniRef90	UHGV-0151990_15	UniRef90_A0A1C6B556	115.0	1.24e-28	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0151990_15	663278.Ethha_0101	94.4	2.31e-21	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0151990_15	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0151990_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_16	phrog_28775	133.7	1.3e-39	tail length tape measure protein	tail
UniRef90	UHGV-0151990_16	UniRef90_A0A844DDD5	380.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0151990_16	1492737.FEM08_12070	143.0	1.03e-32	tape measure	N/A
Pfam	UHGV-0151990_16	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0151990_16	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0151990_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0151990_16	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_17	phrog_33	42.7	0.000000000014	distal tail protein Dit	tail
UniRef90	UHGV-0151990_17	UniRef90_R6N293	114.0	1.02e-27	Putative phage tail component domain protein	N/A
structural_annotation	UHGV-0151990_17	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_18	phrog_18110	72.6	3.9e-21	N/A	unknown function
UniRef90	UHGV-0151990_18	UniRef90_A0A1Y3TWK1	209.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0151990_18	272562.CA_C1879	79.3	0.000000000000406	Phage minor structural protein	N/A
Pfam	UHGV-0151990_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0151990_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0151990_18	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0151990_19	657322.FPR_13530	65.5	0.0000000149	domain, Protein	N/A
COG	UHGV-0151990_19	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_20	phrog_2310	61.2	9.9e-18	N/A	unknown function
UniRef90	UHGV-0151990_21	UniRef90_UPI0018835F0C	256.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0151990_21	411483.FAEPRAA2165_00757	165.0	8.98232e-43	N/A	N/A
KOfam	UHGV-0151990_23	K08640	102.7	6.4e-30	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0151990_23	phrog_894	110.7	1.7e-32	endolysin	lysis
UniRef90	UHGV-0151990_23	UniRef90_A0A1C5NY12	233.0	0	Zinc D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-0151990_23	748224.HMPREF9436_03320	228.0	0	Peptidase M15	N/A
Pfam	UHGV-0151990_23	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0151990_23	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151990_23	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_25	phrog_1863	63.4	2.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0151990_25	748224.HMPREF9436_01412	117.0	4.62e-34	N/A	N/A
PHROG	UHGV-0151990_26	phrog_263	80.8	1.2e-23	holin	lysis
UniRef90	UHGV-0151990_26	UniRef90_A0A2A7AXH0	115.0	5.99e-32	Phage holin	N/A
eggNOG-mapper	UHGV-0151990_26	718252.FP2_06470	110.0	1.83e-30	SPP1 phage holin	N/A
Pfam	UHGV-0151990_26	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0151990_26	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0151990_26	PF04688,TIGR01592	N/A	N/A	N/A	N/A
KOfam	UHGV-0151990_27	K07699	46.6	0.00000000000042	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
UniRef90	UHGV-0151990_27	UniRef90_A0A291T8I8	141.0	9.79998e-41	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0151990_27	1226322.HMPREF1545_01110	65.9	0.00000000000562	Sporulation initiation factor Spo0A C terminal	N/A
Pfam	UHGV-0151990_27	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0151990_27	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0151990_27	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-0151990_28	K14059	104.5	1.7e-30	int; integrase	N/A
PHROG	UHGV-0151990_28	phrog_1	132.4	5e-39	integrase	integration and excision
UniRef90	UHGV-0151990_28	UniRef90_A0A0W7TNE8	280.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0151990_28	1235835.C814_03141	243.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0151990_28	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0151990_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0151990_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0151990_28	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0151990_30	K22300	69.4	7.5e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0151990_30	phrog_8	54.2	0.0000000000000027	transcriptional regulator	transcription regulation
UniRef90	UHGV-0151990_30	UniRef90_E2ZIF0	154.0	1.4013e-45	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0151990_30	748224.HMPREF9436_01444	154.0	0	N/A	N/A
PADLOC	UHGV-0151990_30	retron_type_VI_hth_cluster2_1	47.7	0.00000000000024	N/A	Retron
Pfam	UHGV-0151990_30	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0151990_30	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0151990_30	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0151990_31	UniRef90_UPI001D0EF465	56.2	0.00000000458	BC1881 family protein	N/A
UniRef90	UHGV-0151990_34	UniRef90_UPI000F0633F9	56.6	0.00000000676	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0151990_34	693746.OBV_43260	47.8	0.00000352	N/A	N/A
structural_annotation	UHGV-0151990_34	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_35	phrog_32852	70.5	1.9e-20	N/A	unknown function
structural_annotation	UHGV-0151990_38	PF07875,TIGR02501	N/A	N/A	N/A	N/A
UniRef90	UHGV-0151990_41	UniRef90_UPI001D0E65C2	162.0	0	N/A	N/A
structural_annotation	UHGV-0151990_41	PF12957	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0151990_42	665956.HMPREF1032_03597	195.0	0	DNA binding	N/A
COG	UHGV-0151990_42	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0151990_44	phrog_1366	237.4	0	N/A	unknown function
UniRef90	UHGV-0151990_44	UniRef90_R6S946	320.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0151990_44	748224.HMPREF9436_01458	502.0	0	AAA domain	N/A
Pfam	UHGV-0151990_44	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0151990_44	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0151990_44	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151990_45	PF03838,MF_00130,TIGR00648,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0151990_46	K18959	207.2	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-0151990_46	phrog_16	207.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0151990_46	UniRef90_E2ZIG6	782.0	0	Helicase C-terminal domain protein	N/A
eggNOG-mapper	UHGV-0151990_46	748224.HMPREF9436_01460	782.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-0151990_46	mREase_IV_00004	45.8	0.00000000000048	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0151990_46	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0151990_46	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0151990_46	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0151990_46	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0151990_47	1382304.JNIL01000001_gene3512	56.6	0.0000000862	N/A	N/A
structural_annotation	UHGV-0151990_47	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0151990_48	K06919	117.1	1.6e-34	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0151990_48	phrog_1829	688.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0151990_48	UniRef90_E2ZIG8	1323.0	0	Nucleoside triphosphatase, D5 family	N/A
eggNOG-mapper	UHGV-0151990_48	748224.HMPREF9436_01462	1323.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0151990_48	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0151990_48	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0151990_48	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0151990_48	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0151990_48	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0151990_48	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0151990_49	phrog_36	71.1	2.1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0151990_49	UniRef90_A0A3A6JSY6	191.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0151990_49	748224.HMPREF9436_01463	92.0	5.37e-22	N/A	N/A
structural_annotation	UHGV-0151990_49	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A