UHGV-0156354 (vOTU-125000)

Viral Genome: UHGV-0156354

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0156354
vOTU ID	vOTU-125000
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_471277
Associated BioSample	SAMN06112050
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.78 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.6
Jumbo phage	No

Genome content
Genome length (bp)	25,140
GC content	45.82%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	96%
Average CDS length (bps)	667.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0156354_1	phrog_1762	106.9	1.9e-31	N/A	unknown function
UniRef90	UHGV-0156354_1	UniRef90_A0A3R6NWS9	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-0156354_1	1123487.KB892867_gene1102	75.5	0.000000000000176	N/A	N/A
Pfam	UHGV-0156354_1	PF11185	N/A	N/A	N/A	DUF2971
KOfam	UHGV-0156354_2	K06909	450.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0156354_2	phrog_3717	142.8	1.60028e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0156354_2	UniRef90_UPI001D2E2D83	953.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0156354_2	411461.DORFOR_01162	729.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0156354_2	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0156354_2	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0156354_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0156354_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0156354_2	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_3	phrog_533	347.0	0	portal protein	head and packaging
UniRef90	UHGV-0156354_3	UniRef90_D3ANA2	836.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0156354_3	411461.DORFOR_01163	491.0	0	N/A	N/A
structural_annotation	UHGV-0156354_3	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_4	phrog_581	301.2	0	minor head protein	head and packaging
UniRef90	UHGV-0156354_4	UniRef90_UPI0011DD57C7	699.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0156354_4	411902.CLOBOL_00137	631.0	0	N/A	N/A
Pfam	UHGV-0156354_4	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0156354_4	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0156354_4	PF06152,PF04002	N/A	N/A	N/A	N/A
Pfam	UHGV-0156354_5	PF07813	N/A	N/A	LTXXQ motif family protein	LTXXQ
structural_annotation	UHGV-0156354_6	PF11305,MF_01360,NF010236	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_8	phrog_194	108.7	7e-32	head scaffolding protein	head and packaging
UniRef90	UHGV-0156354_8	UniRef90_UPI00189E528D	266.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0156354_8	411470.RUMGNA_02218	108.0	7.08e-27	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0156354_8	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0156354_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_9	phrog_247	280.5	0	major head protein	head and packaging
UniRef90	UHGV-0156354_9	UniRef90_D3ANA7	685.0	0	Putative coat protein	N/A
eggNOG-mapper	UHGV-0156354_9	1304866.K413DRAFT_3038	560.0	0	N/A	N/A
Pfam	UHGV-0156354_9	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0156354_9	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_10	phrog_541	101.5	6.4e-30	head-tail adaptor	connector
UniRef90	UHGV-0156354_10	UniRef90_A0A371AQT0	97.4	9.32e-24	N/A	N/A
eggNOG-mapper	UHGV-0156354_10	411902.CLOBOL_00133	170.0	0	N/A	N/A
PHROG	UHGV-0156354_11	phrog_3366	90.8	1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0156354_11	411902.CLOBOL_00132	160.0	0	N/A	N/A
Pfam	UHGV-0156354_11	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0156354_11	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_12	phrog_556	83.6	1.3e-24	minor head protein	head and packaging
UniRef90	UHGV-0156354_12	UniRef90_UPI000E44F835	259.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0156354_12	411902.CLOBOL_00131	243.0	0	Minor capsid protein	N/A
Pfam	UHGV-0156354_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0156354_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_13	phrog_3266	130.4	7.7e-39	tail completion	connector
eggNOG-mapper	UHGV-0156354_13	1304866.K413DRAFT_3042	234.0	0	N/A	N/A
structural_annotation	UHGV-0156354_13	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_14	phrog_3099	158.4	0	N/A	unknown function
UniRef90	UHGV-0156354_14	UniRef90_A0A7M3SAI1	191.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0156354_14	411902.CLOBOL_00129	256.0	0	N/A	N/A
structural_annotation	UHGV-0156354_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_15	phrog_11299	106.0	3.3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0156354_15	1298920.KI911353_gene2067	135.0	1.13e-38	N/A	N/A
PHROG	UHGV-0156354_16	phrog_706	140.0	1.49995e-41	N/A	unknown function
UniRef90	UHGV-0156354_16	UniRef90_UPI00192502EA	307.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0156354_16	411902.CLOBOL_00127	266.0	0	N/A	N/A
Pfam	UHGV-0156354_16	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0156354_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_17	phrog_37543	805.3	0	N/A	unknown function
UniRef90	UHGV-0156354_17	UniRef90_UPI001DBC5439	336.0	0	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-0156354_17	411902.CLOBOL_00126	212.0	0	N/A	N/A
COG	UHGV-0156354_17	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0156354_18	phrog_1194	47.6	0.00000000000028	N/A	unknown function
eggNOG-mapper	UHGV-0156354_18	1120998.AUFC01000030_gene2246	96.3	1.54e-22	N/A	N/A
structural_annotation	UHGV-0156354_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_19	phrog_32744	159.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0156354_19	411902.CLOBOL_00124	484.0	0	N/A	N/A
PHROG	UHGV-0156354_20	phrog_18725	48.3	0.00000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0156354_20	411902.CLOBOL_00123	123.0	4.84e-34	N/A	N/A
eggNOG-mapper	UHGV-0156354_21	411902.CLOBOL_00122	101.0	2.56e-25	N/A	N/A
COG	UHGV-0156354_22	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
COG	UHGV-0156354_23	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0156354_23	PF07675,NF038128	N/A	N/A	N/A	N/A
KOfam	UHGV-0156354_24	K13276	68.2	6.1e-20	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0156354_24	phrog_11157	291.2	0	N/A	unknown function
UniRef90	UHGV-0156354_24	UniRef90_D3ABG9	496.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-0156354_24	33035.JPJF01000023_gene3227	397.0	0	N/A	N/A
Pfam	UHGV-0156354_24	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0156354_24	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0156354_24	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0156354_24	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_25	phrog_32322	135.6	1.2e-40	N/A	unknown function
UniRef90	UHGV-0156354_25	UniRef90_D3ABG8	166.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0156354_25	1232446.BAIE02000011_gene1581	67.0	0.000000000000411	N/A	N/A
Pfam	UHGV-0156354_25	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-0156354_25	PF13754	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0156354_26	411461.DORFOR_01184	64.7	0.00000000000155	N/A	N/A
structural_annotation	UHGV-0156354_26	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
KOfam	UHGV-0156354_29	K03733	218.2	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0156354_29	phrog_1	153.6	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-0156354_29	UniRef90_A0A174XRM9	637.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0156354_29	610130.Closa_3343	521.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0156354_29	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0156354_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0156354_29	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0156354_29	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_32	phrog_12931	45.3	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0156354_32	1298920.KI911353_gene2672	77.4	3.06e-16	N/A	N/A
PHROG	UHGV-0156354_33	phrog_134	43.6	0.0000000000042	N/A	unknown function
UniRef90	UHGV-0156354_33	UniRef90_A0A174KS18	74.3	7.34e-17	AraC family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0156354_33	1298920.KI911353_gene4834	71.6	1.57e-16	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0156354_33	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0156354_33	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0156354_34	phrog_4105	78.8	5.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0156354_34	610130.Closa_0762	174.0	0	N/A	N/A
PHROG	UHGV-0156354_35	phrog_1129	68.0	1e-19	holin	lysis
UniRef90	UHGV-0156354_35	UniRef90_A0A416MDZ9	137.0	9.88994e-41	Enolase	N/A
eggNOG-mapper	UHGV-0156354_35	742740.HMPREF9474_03522	133.0	1.03e-39	N/A	N/A
Pfam	UHGV-0156354_35	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0156354_35	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0156354_36	UniRef90_UPI001D068B5A	352.0	0	C40 family peptidase	N/A
eggNOG-mapper	UHGV-0156354_36	411902.CLOBOL_00116	381.0	0	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
COG	UHGV-0156354_36	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0156354_36	PF19127,PF00877,NF033742,COG0791	N/A	N/A	N/A	N/A