UHGV-0156374 (vOTU-062982)

Viral Genome: UHGV-0156374

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0156374
vOTU ID	vOTU-062982
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_498810
Associated BioSample	SAMN06110314
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.71 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	18
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9791
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.6
Jumbo phage	No

Genome content
Genome length (bp)	35,065
GC content	41.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	92%
Average CDS length (bps)	700.24
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0156374_1	phrog_14030	458.9	0	N/A	unknown function
UniRef90	UHGV-0156374_1	UniRef90_UPI001D07F964	894.0	0	C40 family peptidase	N/A
eggNOG-mapper	UHGV-0156374_1	411459.RUMOBE_01085	259.0	0	N/A	N/A
Pfam	UHGV-0156374_1	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-0156374_1	PF05382,PF19087,NF033741,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_2	phrog_1129	87.1	1.1e-25	holin	lysis
UniRef90	UHGV-0156374_2	UniRef90_UPI00051B7422	150.0	1.4013e-45	phage holin family protein	N/A
eggNOG-mapper	UHGV-0156374_2	1121115.AXVN01000006_gene2171	181.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0156374_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0156374_2	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_3	phrog_1863	63.3	8.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0156374_3	693746.OBV_18260	65.1	0.000000000000813	N/A	N/A
PHROG	UHGV-0156374_4	phrog_9886	196.7	0	N/A	unknown function
UniRef90	UHGV-0156374_4	UniRef90_A0A6L8XQA2	1387.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0156374_4	1123075.AUDP01000020_gene1524	224.0	0	Prophage endopeptidase tail	N/A
COG	UHGV-0156374_4	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0156374_4	PF03944	N/A	N/A	N/A	N/A
KOfam	UHGV-0156374_5	K03733	196.2	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0156374_5	phrog_1	158.5	0	integrase	integration and excision
UniRef90	UHGV-0156374_5	UniRef90_A0A6L8Y1E4	659.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0156374_5	411459.RUMOBE_00920	576.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0156374_5	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0156374_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0156374_5	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0156374_5	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0156374_6	411459.RUMOBE_04220	92.4	6.89e-20	Histidine kinase	N/A
COG	UHGV-0156374_6	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A
PHROG	UHGV-0156374_7	phrog_16267	110.8	0	N/A	unknown function
UniRef90	UHGV-0156374_7	UniRef90_A5ZPK6	760.0	0	Phage minor structural protein, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0156374_7	411459.RUMOBE_00923	760.0	0	N/A	N/A
COG	UHGV-0156374_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0156374_7	PF05113,PF02010,NF033848,NF011764,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_8	phrog_1401	68.4	1.1e-19	N/A	unknown function
UniRef90	UHGV-0156374_8	UniRef90_UPI001E3A7391	83.2	4.96e-18	N/A	N/A
eggNOG-mapper	UHGV-0156374_8	1232453.BAIF02000058_gene1640	108.0	6.41e-29	N/A	N/A
structural_annotation	UHGV-0156374_8	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_9	phrog_2566	59.7	4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0156374_9	543734.LCABL_09980	54.3	0.0000000213	N/A	N/A
PHROG	UHGV-0156374_10	phrog_1194	73.2	3.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0156374_10	33035.JPJF01000093_gene2242	152.0	0	N/A	N/A
structural_annotation	UHGV-0156374_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_11	phrog_1535	500.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0156374_11	UniRef90_A0A1C5RGR7	1008.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0156374_11	33035.JPJF01000093_gene2243	815.0	0	phage tail tape measure protein	N/A
COG	UHGV-0156374_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0156374_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_12	phrog_8355	101.8	2.6e-30	N/A	unknown function
UniRef90	UHGV-0156374_12	UniRef90_UPI001C10E2B7	115.0	7.74e-32	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0156374_12	483218.BACPEC_01147	84.0	2.48e-20	Bacteriophage Gp15 protein	N/A
PHROG	UHGV-0156374_13	phrog_8300	94.6	7.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0156374_13	33035.JPJF01000093_gene2245	68.2	0.000000000000129	N/A	N/A
structural_annotation	UHGV-0156374_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_14	phrog_820	109.7	2e-32	major tail protein	tail
eggNOG-mapper	UHGV-0156374_14	33035.JPJF01000093_gene2246	180.0	0	N/A	N/A
structural_annotation	UHGV-0156374_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_15	phrog_2595	90.2	1.9e-26	head-tail connector protein	connector
UniRef90	UHGV-0156374_15	UniRef90_UPI001C0EB705	211.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0156374_15	1123263.AUKY01000051_gene1075	111.0	9.34e-30	N/A	N/A
Pfam	UHGV-0156374_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0156374_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_16	phrog_556	58.5	1.3e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0156374_16	742740.HMPREF9474_03509	176.0	0	N/A	N/A
PHROG	UHGV-0156374_17	phrog_8710	145.4	1.30321e-43	N/A	unknown function
eggNOG-mapper	UHGV-0156374_17	742740.HMPREF9474_03508	149.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-0156374_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_18	phrog_541	96.3	2.6e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0156374_18	1304866.K413DRAFT_0783	195.0	0	N/A	N/A
PHROG	UHGV-0156374_19	phrog_422	274.4	0	major head protein	head and packaging
UniRef90	UHGV-0156374_19	UniRef90_A0A414EG86	580.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0156374_19	663278.Ethha_1589	389.0	0	N/A	N/A
structural_annotation	UHGV-0156374_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_20	phrog_2303	152.2	2.8026e-45	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0156374_20	1304866.K413DRAFT_0806	186.0	0	N/A	N/A
PHROG	UHGV-0156374_23	phrog_581	239.0	0	minor head protein	head and packaging
UniRef90	UHGV-0156374_23	UniRef90_A0A6L8XUH4	1070.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0156374_23	33035.JPJF01000093_gene2255	711.0	0	N/A	N/A
Pfam	UHGV-0156374_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0156374_23	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0156374_23	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0156374_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_24	phrog_25639	134.7	1.50001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0156374_24	742740.HMPREF9474_03502	102.0	1.62e-27	N/A	N/A
PHROG	UHGV-0156374_25	phrog_533	307.9	0	portal protein	head and packaging
UniRef90	UHGV-0156374_25	UniRef90_A0A6L8XU40	1049.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0156374_25	742740.HMPREF9474_03501	723.0	0	N/A	N/A
structural_annotation	UHGV-0156374_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0156374_26	K06909	74.6	1.6e-21	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0156374_26	phrog_10250	55.1	7.7e-16	N/A	unknown function
UniRef90	UHGV-0156374_26	UniRef90_A0A415L5G2	798.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0156374_26	1298920.KI911353_gene4856	692.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0156374_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0156374_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0156374_27	K07474	144.2	1.3999e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0156374_27	phrog_51	160.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-0156374_27	UniRef90_A0A6L8XU44	308.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0156374_27	1298920.KI911353_gene4857	209.0	0	Terminase small subunit	N/A
Pfam	UHGV-0156374_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0156374_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0156374_27	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_30	phrog_1914	81.7	3.6e-24	N/A	unknown function
UniRef90	UHGV-0156374_30	UniRef90_A0A4Q5EPK2	304.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0156374_30	1280694.AUJQ01000012_gene1843	203.0	0	N/A	N/A
Pfam	UHGV-0156374_30	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0156374_30	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0156374_30	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0156374_31	K22300	58.4	1.6e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0156374_31	phrog_8	63.5	5.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0156374_31	UniRef90_A0A1G5F392	160.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0156374_31	1280694.AUJQ01000012_gene1844	126.0	2.04e-36	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0156374_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0156374_31	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0156374_31	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_32	phrog_36	74.5	1.7e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0156374_32	UniRef90_A0A413B185	235.0	0	N/A	N/A
eggNOG-mapper	UHGV-0156374_32	1235800.C819_02243	117.0	8.65e-32	N/A	N/A
structural_annotation	UHGV-0156374_32	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_33	phrog_6568	46.2	0.00000000000047	N/A	unknown function
PHROG	UHGV-0156374_36	phrog_7566	110.4	6.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0156374_36	693746.OBV_24070	75.5	5.81e-16	N/A	N/A
eggNOG-mapper	UHGV-0156374_37	1235798.C817_05493	88.2	6.71e-22	N/A	N/A
PHROG	UHGV-0156374_38	phrog_15077	64.6	7.8e-20	N/A	unknown function
UniRef90	UHGV-0156374_38	UniRef90_A0A174WLY0	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-0156374_38	1280698.AUJS01000007_gene1019	168.0	2.94273e-44	N/A	N/A
PHROG	UHGV-0156374_39	phrog_8470	209.6	0	N/A	unknown function
UniRef90	UHGV-0156374_39	UniRef90_UPI001158FAD9	420.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0156374_39	411902.CLOBOL_05697	455.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0156374_39	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0156374_39	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_40	phrog_4433	42.3	0.0000000000098	N/A	unknown function
eggNOG-mapper	UHGV-0156374_40	411902.CLOBOL_05698	126.0	5.3e-34	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0156374_40	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0156374_40	PF12120,NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0156374_41	1280698.AUJS01000007_gene1016	133.0	1.61e-37	N/A	N/A
KOfam	UHGV-0156374_42	K03469	58.5	1.5e-16	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0156374_42	phrog_531	53.9	0.0000000000000036	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156374_42	UniRef90_A0A416BNE5	199.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0156374_42	411459.RUMOBE_00952	109.0	4.21e-29	RNase H	N/A
Pfam	UHGV-0156374_42	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0156374_42	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0156374_42	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0156374_43	phrog_3584	141.4	6.89999e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0156374_43	UniRef90_UPI001D0EB55A	313.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0156374_43	483218.BACPEC_01173	162.0	0	N/A	N/A
structural_annotation	UHGV-0156374_43	PF21578,NF041486	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0156374_46	1121115.AXVN01000006_gene2172	97.8	1.02e-26	N/A	N/A