Overview | |
---|---|
UHGV ID | UHGV-0156647 |
vOTU ID | vOTU-087857 |
Representative Genome? | Yes |
Source | GPD |
Original genome ID | uvig_488407 |
Associated BioSample | SAMN06110214 |
Viral genome confidence | Uncertain |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 50.85 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 5 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9776 |
Virus hallmark genes (geNomad) | 1 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - viral or bacterial |
viralVerify score | 2.22 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 40,198 |
GC content | 37.98% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 80 |
CDS density | 87% |
Average CDS length (bps) | 434.74 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |